Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 MIR4273-201ENST00000582824 84 ntBASIC0.28□□□□□ -2.36
RBFOX3A6NFN3 AC011712.1-201ENST00000588959 234 ntBASIC0.28□□□□□ -2.36
RBFOX3A6NFN3 AL162413.1-201ENST00000603198 110 ntBASIC0.28□□□□□ -2.36
RBFOX3A6NFN3 AL357075.2-201ENST00000614906 189 ntBASIC0.28□□□□□ -2.36
RBFOX3A6NFN3 AC007742.2-201ENST00000618226 398 ntBASIC0.28□□□□□ -2.36
RBFOX3A6NFN3 PVT1_3.1-201ENST00000620853 95 ntBASIC0.28□□□□□ -2.36
RBFOX3A6NFN3 Y_RNA.106-201ENST00000363189 100 ntBASIC0.27□□□□□ -2.37
RBFOX3A6NFN3 Y_RNA.112-201ENST00000363250 102 ntBASIC0.27□□□□□ -2.37
RBFOX3A6NFN3 SNORD116-11-201ENST00000383882 92 ntBASIC0.27□□□□□ -2.37
RBFOX3A6NFN3 Y_RNA.414-201ENST00000384011 101 ntBASIC0.27□□□□□ -2.37
RBFOX3A6NFN3 RNU6-1042P-201ENST00000384204 107 ntBASIC0.27□□□□□ -2.37
RBFOX3A6NFN3 SNORD116-8-201ENST00000384365 95 ntBASIC0.27□□□□□ -2.37
RBFOX3A6NFN3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.27□□□□□ -2.37
RBFOX3A6NFN3 RNU6-908P-201ENST00000410160 94 ntBASIC0.27□□□□□ -2.37
RBFOX3A6NFN3 RNA5SP222-201ENST00000411039 105 ntBASIC0.27□□□□□ -2.37
RBFOX3A6NFN3 RNU6-177P-201ENST00000411257 104 ntBASIC0.27□□□□□ -2.37
RBFOX3A6NFN3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.27□□□□□ -2.37
RBFOX3A6NFN3 AL392103.1-201ENST00000447000 198 ntBASIC0.27□□□□□ -2.37
RBFOX3A6NFN3 RNU6-1281P-201ENST00000516223 105 ntBASIC0.27□□□□□ -2.37
RBFOX3A6NFN3 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.27□□□□□ -2.37
RBFOX3A6NFN3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.27□□□□□ -2.37
RBFOX3A6NFN3 AC104260.1-201ENST00000616660 539 ntBASIC0.27□□□□□ -2.37
RBFOX3A6NFN3 AL591926.4-201ENST00000616895 298 ntBASIC0.27□□□□□ -2.37
RBFOX3A6NFN3 AC134026.1-201ENST00000623249 2239 ntBASIC0.27□□□□□ -2.37
RBFOX3A6NFN3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
RBFOX3A6NFN3 SNORD113.3-201ENST00000364630 78 ntBASIC0.26□□□□□ -2.37
RBFOX3A6NFN3 Y_RNA.361-201ENST00000365515 120 ntBASIC0.26□□□□□ -2.37
RBFOX3A6NFN3 MIR516B2-201ENST00000385190 85 ntBASIC0.26□□□□□ -2.37
RBFOX3A6NFN3 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.26□□□□□ -2.37
RBFOX3A6NFN3 AL354751.2-201ENST00000415471 210 ntBASIC0.26□□□□□ -2.37
RBFOX3A6NFN3 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.26□□□□□ -2.37
RBFOX3A6NFN3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.26□□□□□ -2.37
RBFOX3A6NFN3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.26□□□□□ -2.37
RBFOX3A6NFN3 AC018448.1-201ENST00000552843 316 ntBASIC0.26□□□□□ -2.37
RBFOX3A6NFN3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.26□□□□□ -2.37
RBFOX3A6NFN3 AL512605.2-201ENST00000592972 256 ntBASIC0.26□□□□□ -2.37
RBFOX3A6NFN3 AF250324.2-201ENST00000608299 610 ntBASIC0.26□□□□□ -2.37
RBFOX3A6NFN3 MIR6516-201ENST00000630554 81 ntBASIC0.26□□□□□ -2.37
RBFOX3A6NFN3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.25□□□□□ -2.37
RBFOX3A6NFN3 MIRLET7D-201ENST00000362263 87 ntBASIC0.25□□□□□ -2.37
RBFOX3A6NFN3 RNU6-454P-201ENST00000364292 107 ntBASIC0.25□□□□□ -2.37
RBFOX3A6NFN3 Y_RNA.243-201ENST00000364481 109 ntBASIC0.25□□□□□ -2.37
RBFOX3A6NFN3 RNU6-259P-201ENST00000383999 107 ntBASIC0.25□□□□□ -2.37
RBFOX3A6NFN3 SNORA36.2-201ENST00000384004 127 ntBASIC0.25□□□□□ -2.37
RBFOX3A6NFN3 RNU6-306P-201ENST00000384617 107 ntBASIC0.25□□□□□ -2.37
RBFOX3A6NFN3 MIR140-201ENST00000385282 100 ntBASIC0.25□□□□□ -2.37
RBFOX3A6NFN3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
RBFOX3A6NFN3 MTCO2P12-201ENST00000427426 682 ntBASIC0.25□□□□□ -2.37
RBFOX3A6NFN3 MTND1P4-201ENST00000435196 415 ntBASIC0.25□□□□□ -2.37
RBFOX3A6NFN3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.25□□□□□ -2.37
RBFOX3A6NFN3 ELOCP24-201ENST00000456370 334 ntBASIC0.25□□□□□ -2.37
RBFOX3A6NFN3 AC002350.1-201ENST00000490759 375 ntBASIC0.25□□□□□ -2.37
RBFOX3A6NFN3 AC019235.1-201ENST00000503847 207 ntBASIC0.25□□□□□ -2.37
RBFOX3A6NFN3 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.25□□□□□ -2.37
RBFOX3A6NFN3 SNORA68.3-201ENST00000515906 83 ntBASIC0.25□□□□□ -2.37
RBFOX3A6NFN3 RNU6-63P-201ENST00000516690 95 ntBASIC0.25□□□□□ -2.37
RBFOX3A6NFN3 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.25□□□□□ -2.37
RBFOX3A6NFN3 NBR2-204ENST00000587322 63 ntBASIC0.25□□□□□ -2.37
RBFOX3A6NFN3 AL589743.1-201ENST00000551932 2712 ntBASIC0.25□□□□□ -2.37
RBFOX3A6NFN3 AC090625.1-201ENST00000357130 210 ntBASIC0.24□□□□□ -2.37
RBFOX3A6NFN3 RNU6-451P-201ENST00000362921 107 ntBASIC0.24□□□□□ -2.37
RBFOX3A6NFN3 VTRNA1-3-201ENST00000365645 89 ntBASIC0.24□□□□□ -2.37
RBFOX3A6NFN3 RNU6-136P-201ENST00000384663 107 ntBASIC0.24□□□□□ -2.37
RBFOX3A6NFN3 MIR193B-201ENST00000384907 83 ntBASIC0.24□□□□□ -2.37
RBFOX3A6NFN3 MIR1302-7-201ENST00000408841 72 ntBASIC0.24□□□□□ -2.37
RBFOX3A6NFN3 RNU6-1304P-201ENST00000411374 106 ntBASIC0.24□□□□□ -2.37
RBFOX3A6NFN3 RNA5SP134-201ENST00000516492 96 ntBASIC0.24□□□□□ -2.37
RBFOX3A6NFN3 MIR3674-201ENST00000636576 68 ntBASIC0.24□□□□□ -2.37
RBFOX3A6NFN3 AC010487.4-201ENST00000637027 61 ntBASIC0.24□□□□□ -2.37
RBFOX3A6NFN3 AC100810.6-201ENST00000638068 285 ntBASIC0.24□□□□□ -2.37
RBFOX3A6NFN3 RNY3P3-201ENST00000363816 102 ntBASIC0.23□□□□□ -2.37
RBFOX3A6NFN3 RNY1P8-201ENST00000383970 114 ntBASIC0.23□□□□□ -2.37
RBFOX3A6NFN3 Y_RNA.498-201ENST00000384460 102 ntBASIC0.23□□□□□ -2.37
RBFOX3A6NFN3 RNA5SP193-201ENST00000410353 107 ntBASIC0.23□□□□□ -2.37
RBFOX3A6NFN3 RNU6-613P-201ENST00000410412 108 ntBASIC0.23□□□□□ -2.37
RBFOX3A6NFN3 RNA5SP511-201ENST00000410487 115 ntBASIC0.23□□□□□ -2.37
RBFOX3A6NFN3 DLGAP5P1-201ENST00000430307 464 ntBASIC0.23□□□□□ -2.37
RBFOX3A6NFN3 RNU6-625P-201ENST00000459412 107 ntBASIC0.23□□□□□ -2.37
RBFOX3A6NFN3 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.23□□□□□ -2.37
RBFOX3A6NFN3 SNORA18.7-201ENST00000516910 131 ntBASIC0.23□□□□□ -2.37
RBFOX3A6NFN3 OSBPL9P5-201ENST00000542581 171 ntBASIC0.23□□□□□ -2.37
RBFOX3A6NFN3 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.23□□□□□ -2.37
RBFOX3A6NFN3 MIR5701-3-201ENST00000578890 82 ntBASIC0.23□□□□□ -2.37
RBFOX3A6NFN3 MIR5701-1-201ENST00000585138 82 ntBASIC0.23□□□□□ -2.37
RBFOX3A6NFN3 AC104695.3-201ENST00000604052 296 ntBASIC0.23□□□□□ -2.37
RBFOX3A6NFN3 MIR5701-2-201ENST00000615634 82 ntBASIC0.23□□□□□ -2.37
RBFOX3A6NFN3 AC078883.4-201ENST00000623218 367 ntBASIC0.23□□□□□ -2.37
RBFOX3A6NFN3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
RBFOX3A6NFN3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.22□□□□□ -2.37
RBFOX3A6NFN3 MIR1-1-201ENST00000362147 71 ntBASIC0.22□□□□□ -2.37
RBFOX3A6NFN3 RNU6-654P-201ENST00000364373 107 ntBASIC0.22□□□□□ -2.37
RBFOX3A6NFN3 Y_RNA.364-201ENST00000365532 101 ntBASIC0.22□□□□□ -2.37
RBFOX3A6NFN3 RNU6-483P-201ENST00000384088 108 ntBASIC0.22□□□□□ -2.37
RBFOX3A6NFN3 RNU2-66P-201ENST00000410650 161 ntBASIC0.22□□□□□ -2.37
RBFOX3A6NFN3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.22□□□□□ -2.37
RBFOX3A6NFN3 SNORD123-201ENST00000459473 70 ntBASIC0.22□□□□□ -2.37
RBFOX3A6NFN3 RNA5SP480-201ENST00000516840 109 ntBASIC0.22□□□□□ -2.37
RBFOX3A6NFN3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.22□□□□□ -2.37
RBFOX3A6NFN3 AC093027.1-201ENST00000546698 429 ntBASIC0.22□□□□□ -2.37
RBFOX3A6NFN3 MIR3974-201ENST00000637126 96 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 319.2 ms