Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 RNU6-35P-201ENST00000384530 107 ntBASIC-0.24□□□□□ -2.45
TCRBV4S1A1TA0A5B7 MIR214-201ENST00000385214 110 ntBASIC-0.24□□□□□ -2.45
TCRBV4S1A1TA0A5B7 MT-TN-201ENST00000387400 73 ntBASIC-0.24□□□□□ -2.45
TCRBV4S1A1TA0A5B7 RNA5SP496-201ENST00000391240 109 ntBASIC-0.24□□□□□ -2.45
TCRBV4S1A1TA0A5B7 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.24□□□□□ -2.45
TCRBV4S1A1TA0A5B7 CYCSP46-201ENST00000423569 204 ntBASIC-0.24□□□□□ -2.45
TCRBV4S1A1TA0A5B7 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.24□□□□□ -2.45
TCRBV4S1A1TA0A5B7 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.24□□□□□ -2.45
TCRBV4S1A1TA0A5B7 MIR548AR-201ENST00000582191 57 ntBASIC-0.24□□□□□ -2.45
TCRBV4S1A1TA0A5B7 AP002371.2-201ENST00000624450 503 ntBASIC-0.24□□□□□ -2.45
TCRBV4S1A1TA0A5B7 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.24□□□□□ -2.45
TCRBV4S1A1TA0A5B7 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.24□□□□□ -2.45
TCRBV4S1A1TA0A5B7 SNORD114-31-201ENST00000363219 75 ntBASIC-0.25□□□□□ -2.45
TCRBV4S1A1TA0A5B7 SNORA36.1-201ENST00000363424 132 ntBASIC-0.25□□□□□ -2.45
TCRBV4S1A1TA0A5B7 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.25□□□□□ -2.45
TCRBV4S1A1TA0A5B7 Y_RNA.378-201ENST00000365652 113 ntBASIC-0.25□□□□□ -2.45
TCRBV4S1A1TA0A5B7 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.25□□□□□ -2.45
TCRBV4S1A1TA0A5B7 MIR329-1-201ENST00000385028 80 ntBASIC-0.25□□□□□ -2.45
TCRBV4S1A1TA0A5B7 RNU6-205P-201ENST00000390858 107 ntBASIC-0.25□□□□□ -2.45
TCRBV4S1A1TA0A5B7 PCNPP3-201ENST00000393579 471 ntBASIC-0.25□□□□□ -2.45
TCRBV4S1A1TA0A5B7 MIR873-201ENST00000401120 77 ntBASIC-0.25□□□□□ -2.45
TCRBV4S1A1TA0A5B7 RNU2-54P-201ENST00000410299 190 ntBASIC-0.25□□□□□ -2.45
TCRBV4S1A1TA0A5B7 RNU2-59P-201ENST00000410482 191 ntBASIC-0.25□□□□□ -2.45
TCRBV4S1A1TA0A5B7 AL354751.2-201ENST00000415471 210 ntBASIC-0.25□□□□□ -2.45
TCRBV4S1A1TA0A5B7 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.25□□□□□ -2.45
TCRBV4S1A1TA0A5B7 AC073464.1-201ENST00000429823 534 ntBASIC-0.25□□□□□ -2.45
TCRBV4S1A1TA0A5B7 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.25□□□□□ -2.45
TCRBV4S1A1TA0A5B7 AC046134.1-201ENST00000514454 666 ntBASIC-0.25□□□□□ -2.45
TCRBV4S1A1TA0A5B7 SNORA19.2-201ENST00000516013 114 ntBASIC-0.25□□□□□ -2.45
TCRBV4S1A1TA0A5B7 Y_RNA.683-201ENST00000516508 93 ntBASIC-0.25□□□□□ -2.45
TCRBV4S1A1TA0A5B7 SNORD45.4-201ENST00000516629 73 ntBASIC-0.25□□□□□ -2.45
TCRBV4S1A1TA0A5B7 IGLVI-20-201ENST00000519296 130 ntBASIC-0.25□□□□□ -2.45
TCRBV4S1A1TA0A5B7 AC100830.2-201ENST00000581636 240 ntBASIC-0.25□□□□□ -2.45
TCRBV4S1A1TA0A5B7 MIR4802-201ENST00000581881 80 ntBASIC-0.25□□□□□ -2.45
TCRBV4S1A1TA0A5B7 FAM157A-202ENST00000615155 405 ntBASIC-0.25□□□□□ -2.45
TCRBV4S1A1TA0A5B7 MIR6755-201ENST00000619993 66 ntBASIC-0.25□□□□□ -2.45
TCRBV4S1A1TA0A5B7 AC098679.4-201ENST00000624241 654 ntBASIC-0.25□□□□□ -2.45
TCRBV4S1A1TA0A5B7 AC106754.1-201ENST00000562632 1513 ntBASIC-0.25□□□□□ -2.45
TCRBV4S1A1TA0A5B7 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.26□□□□□ -2.45
TCRBV4S1A1TA0A5B7 SNORD113-7-201ENST00000363762 77 ntBASIC-0.26□□□□□ -2.45
TCRBV4S1A1TA0A5B7 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.26□□□□□ -2.45
TCRBV4S1A1TA0A5B7 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.26□□□□□ -2.45
TCRBV4S1A1TA0A5B7 RNU6-214P-201ENST00000384130 107 ntBASIC-0.26□□□□□ -2.45
TCRBV4S1A1TA0A5B7 Y_RNA.560-201ENST00000384689 102 ntBASIC-0.26□□□□□ -2.45
TCRBV4S1A1TA0A5B7 MIR145-201ENST00000384967 88 ntBASIC-0.26□□□□□ -2.45
TCRBV4S1A1TA0A5B7 MIR522-201ENST00000385071 87 ntBASIC-0.26□□□□□ -2.45
TCRBV4S1A1TA0A5B7 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.26□□□□□ -2.45
TCRBV4S1A1TA0A5B7 AL353572.1-201ENST00000442490 417 ntBASIC-0.26□□□□□ -2.45
TCRBV4S1A1TA0A5B7 SUMO1P2-201ENST00000452524 304 ntBASIC-0.26□□□□□ -2.45
TCRBV4S1A1TA0A5B7 RNU7-187P-201ENST00000458985 68 ntBASIC-0.26□□□□□ -2.45
TCRBV4S1A1TA0A5B7 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.26□□□□□ -2.45
TCRBV4S1A1TA0A5B7 SNORA40.12-201ENST00000516329 111 ntBASIC-0.26□□□□□ -2.45
TCRBV4S1A1TA0A5B7 RN7SKP287-201ENST00000516546 266 ntBASIC-0.26□□□□□ -2.45
TCRBV4S1A1TA0A5B7 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.26□□□□□ -2.45
TCRBV4S1A1TA0A5B7 MIR5589-201ENST00000579442 60 ntBASIC-0.26□□□□□ -2.45
TCRBV4S1A1TA0A5B7 AC090897.1-201ENST00000580909 226 ntBASIC-0.26□□□□□ -2.45
TCRBV4S1A1TA0A5B7 MIR4636-201ENST00000582271 80 ntBASIC-0.26□□□□□ -2.45
TCRBV4S1A1TA0A5B7 AC008608.1-201ENST00000603910 127 ntBASIC-0.26□□□□□ -2.45
TCRBV4S1A1TA0A5B7 AC005828.6-201ENST00000606610 232 ntBASIC-0.26□□□□□ -2.45
TCRBV4S1A1TA0A5B7 U6.115-201ENST00000636045 103 ntBASIC-0.26□□□□□ -2.45
TCRBV4S1A1TA0A5B7 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.27□□□□□ -2.45
TCRBV4S1A1TA0A5B7 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.27□□□□□ -2.45
TCRBV4S1A1TA0A5B7 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.27□□□□□ -2.45
TCRBV4S1A1TA0A5B7 MIR570-201ENST00000384917 97 ntBASIC-0.27□□□□□ -2.45
TCRBV4S1A1TA0A5B7 MIR610-201ENST00000385139 96 ntBASIC-0.27□□□□□ -2.45
TCRBV4S1A1TA0A5B7 RNU6-127P-201ENST00000390897 107 ntBASIC-0.27□□□□□ -2.45
TCRBV4S1A1TA0A5B7 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.27□□□□□ -2.45
TCRBV4S1A1TA0A5B7 MTCO1P20-201ENST00000425366 358 ntBASIC-0.27□□□□□ -2.45
TCRBV4S1A1TA0A5B7 BTF3P11-201ENST00000426582 477 ntBASIC-0.27□□□□□ -2.45
TCRBV4S1A1TA0A5B7 AL358934.1-201ENST00000432346 324 ntBASIC-0.27□□□□□ -2.45
TCRBV4S1A1TA0A5B7 MTCO2P30-201ENST00000503662 364 ntBASIC-0.27□□□□□ -2.45
TCRBV4S1A1TA0A5B7 RNA5SP395-201ENST00000516567 118 ntBASIC-0.27□□□□□ -2.45
TCRBV4S1A1TA0A5B7 RNU6-1332P-201ENST00000516666 104 ntBASIC-0.27□□□□□ -2.45
TCRBV4S1A1TA0A5B7 AC005609.4-201ENST00000625071 447 ntBASIC-0.27□□□□□ -2.45
TCRBV4S1A1TA0A5B7 Y_RNA.167-201ENST00000363735 109 ntBASIC-0.28□□□□□ -2.45
TCRBV4S1A1TA0A5B7 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.28□□□□□ -2.45
TCRBV4S1A1TA0A5B7 ELOCP21-201ENST00000412558 336 ntBASIC-0.28□□□□□ -2.45
TCRBV4S1A1TA0A5B7 RNU6-329P-201ENST00000459618 107 ntBASIC-0.28□□□□□ -2.45
TCRBV4S1A1TA0A5B7 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.28□□□□□ -2.45
TCRBV4S1A1TA0A5B7 MIR3913-1-201ENST00000577744 102 ntBASIC-0.28□□□□□ -2.45
TCRBV4S1A1TA0A5B7 AC240442.1-201ENST00000616055 283 ntBASIC-0.28□□□□□ -2.45
TCRBV4S1A1TA0A5B7 AL354950.2-201ENST00000617939 290 ntBASIC-0.28□□□□□ -2.45
TCRBV4S1A1TA0A5B7 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.28□□□□□ -2.45
TCRBV4S1A1TA0A5B7 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.29□□□□□ -2.46
TCRBV4S1A1TA0A5B7 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.29□□□□□ -2.46
TCRBV4S1A1TA0A5B7 RNU4-28P-201ENST00000364739 141 ntBASIC-0.29□□□□□ -2.46
TCRBV4S1A1TA0A5B7 RNU6-125P-201ENST00000384505 107 ntBASIC-0.29□□□□□ -2.46
TCRBV4S1A1TA0A5B7 RNU6-1158P-201ENST00000391167 107 ntBASIC-0.29□□□□□ -2.46
TCRBV4S1A1TA0A5B7 MIR938-201ENST00000401216 83 ntBASIC-0.29□□□□□ -2.46
TCRBV4S1A1TA0A5B7 MIR1912-201ENST00000410389 80 ntBASIC-0.29□□□□□ -2.46
TCRBV4S1A1TA0A5B7 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.29□□□□□ -2.46
TCRBV4S1A1TA0A5B7 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.29□□□□□ -2.46
TCRBV4S1A1TA0A5B7 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-0.29□□□□□ -2.46
TCRBV4S1A1TA0A5B7 AC134698.4-201ENST00000523451 826 ntBASIC-0.29□□□□□ -2.46
TCRBV4S1A1TA0A5B7 AC133485.4-201ENST00000561835 220 ntBASIC-0.29□□□□□ -2.46
TCRBV4S1A1TA0A5B7 AC090616.2-202ENST00000584248 222 ntBASIC-0.29□□□□□ -2.46
TCRBV4S1A1TA0A5B7 AC010525.2-201ENST00000590920 195 ntBASIC-0.29□□□□□ -2.46
TCRBV4S1A1TA0A5B7 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-0.29□□□□□ -2.46
TCRBV4S1A1TA0A5B7 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.3□□□□□ -2.46
TCRBV4S1A1TA0A5B7 RNU4-21P-201ENST00000362802 126 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms