Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.82□□□□□ -2.12
IGHV4-28A0A0C4DH34 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
IGHV4-28A0A0C4DH34 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
IGHV4-28A0A0C4DH34 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
IGHV4-28A0A0C4DH34 MIR367-201ENST00000362299 68 ntBASIC1.81□□□□□ -2.12
IGHV4-28A0A0C4DH34 Y_RNA.24-201ENST00000362508 103 ntBASIC1.81□□□□□ -2.12
IGHV4-28A0A0C4DH34 Y_RNA.29-201ENST00000362570 113 ntBASIC1.81□□□□□ -2.12
IGHV4-28A0A0C4DH34 RNU6-47P-201ENST00000383866 107 ntBASIC1.81□□□□□ -2.12
IGHV4-28A0A0C4DH34 SNORA8.3-201ENST00000384679 139 ntBASIC1.81□□□□□ -2.12
IGHV4-28A0A0C4DH34 Y_RNA.572-201ENST00000384757 98 ntBASIC1.81□□□□□ -2.12
IGHV4-28A0A0C4DH34 MIR524-201ENST00000385242 87 ntBASIC1.81□□□□□ -2.12
IGHV4-28A0A0C4DH34 SNORA48.1-201ENST00000390879 135 ntBASIC1.81□□□□□ -2.12
IGHV4-28A0A0C4DH34 RNU11-5P-201ENST00000391216 129 ntBASIC1.81□□□□□ -2.12
IGHV4-28A0A0C4DH34 SNORA11.2-201ENST00000408318 127 ntBASIC1.81□□□□□ -2.12
IGHV4-28A0A0C4DH34 RNU6-383P-201ENST00000410864 94 ntBASIC1.81□□□□□ -2.12
IGHV4-28A0A0C4DH34 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.81□□□□□ -2.12
IGHV4-28A0A0C4DH34 AC245047.4-201ENST00000433189 144 ntBASIC1.81□□□□□ -2.12
IGHV4-28A0A0C4DH34 Z98949.2-201ENST00000440996 144 ntBASIC1.81□□□□□ -2.12
IGHV4-28A0A0C4DH34 AL606517.2-201ENST00000442855 241 ntBASIC1.81□□□□□ -2.12
IGHV4-28A0A0C4DH34 CBX3P4-201ENST00000538909 354 ntBASIC1.81□□□□□ -2.12
IGHV4-28A0A0C4DH34 AL929325.1-201ENST00000603096 117 ntBASIC1.81□□□□□ -2.12
IGHV4-28A0A0C4DH34 Z83818.1-201ENST00000603584 150 ntBASIC1.81□□□□□ -2.12
IGHV4-28A0A0C4DH34 RNU6-1020P-201ENST00000363684 107 ntBASIC1.8□□□□□ -2.12
IGHV4-28A0A0C4DH34 RNU6-1019P-201ENST00000364424 107 ntBASIC1.8□□□□□ -2.12
IGHV4-28A0A0C4DH34 SNORA67.1-201ENST00000364749 141 ntBASIC1.8□□□□□ -2.12
IGHV4-28A0A0C4DH34 RNU4-17P-201ENST00000365598 141 ntBASIC1.8□□□□□ -2.12
IGHV4-28A0A0C4DH34 RNU6-144P-201ENST00000383951 107 ntBASIC1.8□□□□□ -2.12
IGHV4-28A0A0C4DH34 RNU6-1080P-201ENST00000383982 107 ntBASIC1.8□□□□□ -2.12
IGHV4-28A0A0C4DH34 Y_RNA.785-201ENST00000384290 109 ntBASIC1.8□□□□□ -2.12
IGHV4-28A0A0C4DH34 MT-TR-201ENST00000387439 65 ntBASIC1.8□□□□□ -2.12
IGHV4-28A0A0C4DH34 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
IGHV4-28A0A0C4DH34 RNA5SP109-201ENST00000391010 116 ntBASIC1.8□□□□□ -2.12
IGHV4-28A0A0C4DH34 SNORD23.1-201ENST00000408212 104 ntBASIC1.8□□□□□ -2.12
IGHV4-28A0A0C4DH34 SUMO1P4-201ENST00000429430 302 ntBASIC1.8□□□□□ -2.12
IGHV4-28A0A0C4DH34 RNU6-437P-201ENST00000459408 95 ntBASIC1.8□□□□□ -2.12
IGHV4-28A0A0C4DH34 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.8□□□□□ -2.12
IGHV4-28A0A0C4DH34 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.8□□□□□ -2.12
IGHV4-28A0A0C4DH34 Y_RNA.700-201ENST00000516806 100 ntBASIC1.8□□□□□ -2.12
IGHV4-28A0A0C4DH34 RNU6-341P-201ENST00000516973 96 ntBASIC1.8□□□□□ -2.12
IGHV4-28A0A0C4DH34 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
IGHV4-28A0A0C4DH34 AC021269.2-201ENST00000532318 330 ntBASIC1.8□□□□□ -2.12
IGHV4-28A0A0C4DH34 MIR4308-201ENST00000580634 81 ntBASIC1.8□□□□□ -2.12
IGHV4-28A0A0C4DH34 MIR5092-201ENST00000583139 88 ntBASIC1.8□□□□□ -2.12
IGHV4-28A0A0C4DH34 AC022217.4-201ENST00000604389 163 ntBASIC1.8□□□□□ -2.12
IGHV4-28A0A0C4DH34 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
IGHV4-28A0A0C4DH34 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
IGHV4-28A0A0C4DH34 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
IGHV4-28A0A0C4DH34 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
IGHV4-28A0A0C4DH34 AC100821.1-201ENST00000523153 2479 ntBASIC1.79□□□□□ -2.12
IGHV4-28A0A0C4DH34 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
IGHV4-28A0A0C4DH34 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
IGHV4-28A0A0C4DH34 MIR6073-201ENST00000352083 89 ntBASIC1.79□□□□□ -2.12
IGHV4-28A0A0C4DH34 RNU6-969P-201ENST00000383900 105 ntBASIC1.79□□□□□ -2.12
IGHV4-28A0A0C4DH34 MIR626-201ENST00000385032 94 ntBASIC1.79□□□□□ -2.12
IGHV4-28A0A0C4DH34 MIR526A2-201ENST00000390198 65 ntBASIC1.79□□□□□ -2.12
IGHV4-28A0A0C4DH34 MIR1278-201ENST00000408753 81 ntBASIC1.79□□□□□ -2.12
IGHV4-28A0A0C4DH34 RNU2-64P-201ENST00000411315 191 ntBASIC1.79□□□□□ -2.12
IGHV4-28A0A0C4DH34 RNA5SP508-201ENST00000411327 119 ntBASIC1.79□□□□□ -2.12
IGHV4-28A0A0C4DH34 COX6CP10-201ENST00000416832 224 ntBASIC1.79□□□□□ -2.12
IGHV4-28A0A0C4DH34 RNU7-94P-201ENST00000459576 63 ntBASIC1.79□□□□□ -2.12
IGHV4-28A0A0C4DH34 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.79□□□□□ -2.12
IGHV4-28A0A0C4DH34 AC022559.1-201ENST00000520905 205 ntBASIC1.79□□□□□ -2.12
IGHV4-28A0A0C4DH34 MIR4724-201ENST00000579485 89 ntBASIC1.79□□□□□ -2.12
IGHV4-28A0A0C4DH34 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.79□□□□□ -2.12
IGHV4-28A0A0C4DH34 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.79□□□□□ -2.12
IGHV4-28A0A0C4DH34 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
IGHV4-28A0A0C4DH34 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
IGHV4-28A0A0C4DH34 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
IGHV4-28A0A0C4DH34 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.78□□□□□ -2.12
IGHV4-28A0A0C4DH34 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
IGHV4-28A0A0C4DH34 SNORA25.6-201ENST00000364121 118 ntBASIC1.78□□□□□ -2.12
IGHV4-28A0A0C4DH34 PIGPP3-201ENST00000425307 415 ntBASIC1.78□□□□□ -2.12
IGHV4-28A0A0C4DH34 AC245047.3-201ENST00000429428 127 ntBASIC1.78□□□□□ -2.12
IGHV4-28A0A0C4DH34 MTND2P29-201ENST00000438595 412 ntBASIC1.78□□□□□ -2.12
IGHV4-28A0A0C4DH34 RPS12P2-201ENST00000439728 269 ntBASIC1.78□□□□□ -2.12
IGHV4-28A0A0C4DH34 RPS27P1-201ENST00000450552 247 ntBASIC1.78□□□□□ -2.12
IGHV4-28A0A0C4DH34 AC055731.1-201ENST00000474387 401 ntBASIC1.78□□□□□ -2.12
IGHV4-28A0A0C4DH34 RNU6-182P-201ENST00000516970 105 ntBASIC1.78□□□□□ -2.12
IGHV4-28A0A0C4DH34 RNU2-19P-201ENST00000517288 84 ntBASIC1.78□□□□□ -2.12
IGHV4-28A0A0C4DH34 AP002392.1-201ENST00000537692 208 ntBASIC1.78□□□□□ -2.12
IGHV4-28A0A0C4DH34 AC004792.1-201ENST00000614523 137 ntBASIC1.78□□□□□ -2.12
IGHV4-28A0A0C4DH34 AC012640.5-201ENST00000623897 319 ntBASIC1.78□□□□□ -2.12
IGHV4-28A0A0C4DH34 AC010297.1-201ENST00000623948 149 ntBASIC1.78□□□□□ -2.12
IGHV4-28A0A0C4DH34 CTSLP2-204ENST00000629029 392 ntBASIC1.78□□□□□ -2.12
IGHV4-28A0A0C4DH34 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
IGHV4-28A0A0C4DH34 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
IGHV4-28A0A0C4DH34 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
IGHV4-28A0A0C4DH34 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.77□□□□□ -2.13
IGHV4-28A0A0C4DH34 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
IGHV4-28A0A0C4DH34 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
IGHV4-28A0A0C4DH34 SNORA1B-201ENST00000362535 133 ntBASIC1.77□□□□□ -2.13
IGHV4-28A0A0C4DH34 Y_RNA.203-201ENST00000364106 102 ntBASIC1.77□□□□□ -2.13
IGHV4-28A0A0C4DH34 snoU2_19.4-201ENST00000364329 80 ntBASIC1.77□□□□□ -2.13
IGHV4-28A0A0C4DH34 RNU4-41P-201ENST00000364426 143 ntBASIC1.77□□□□□ -2.13
IGHV4-28A0A0C4DH34 DEFA7P-201ENST00000382676 285 ntBASIC1.77□□□□□ -2.13
IGHV4-28A0A0C4DH34 RNU6-918P-201ENST00000391219 106 ntBASIC1.77□□□□□ -2.13
IGHV4-28A0A0C4DH34 RNU6-381P-201ENST00000391259 108 ntBASIC1.77□□□□□ -2.13
IGHV4-28A0A0C4DH34 AL359511.1-201ENST00000402970 211 ntBASIC1.77□□□□□ -2.13
IGHV4-28A0A0C4DH34 RNU2-2P-201ENST00000410396 191 ntBASIC1.77□□□□□ -2.13
IGHV4-28A0A0C4DH34 AC234781.5-201ENST00000508429 271 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms