Protein–RNA interactions for Protein: A0A0B4J1U7

IGHV6-1, Immunoglobulin heavy variable 6-1, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV6-1A0A0B4J1U7 AC015540.1-201ENST00000615828 501 ntBASIC0.39□□□□□ -2.35
IGHV6-1A0A0B4J1U7 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.39□□□□□ -2.35
IGHV6-1A0A0B4J1U7 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.39□□□□□ -2.35
IGHV6-1A0A0B4J1U7 SNORD114-27-201ENST00000363766 70 ntBASIC0.38□□□□□ -2.35
IGHV6-1A0A0B4J1U7 Y_RNA.253-201ENST00000364562 112 ntBASIC0.38□□□□□ -2.35
IGHV6-1A0A0B4J1U7 MIR764-201ENST00000390811 85 ntBASIC0.38□□□□□ -2.35
IGHV6-1A0A0B4J1U7 RNU1-119P-201ENST00000391122 165 ntBASIC0.38□□□□□ -2.35
IGHV6-1A0A0B4J1U7 SNORD111-201ENST00000408139 94 ntBASIC0.38□□□□□ -2.35
IGHV6-1A0A0B4J1U7 RNU6-1050P-201ENST00000410388 107 ntBASIC0.38□□□□□ -2.35
IGHV6-1A0A0B4J1U7 MTND2P22-201ENST00000444325 1033 ntBASIC0.38□□□□□ -2.35
IGHV6-1A0A0B4J1U7 HMGN2P32-201ENST00000444648 269 ntBASIC0.38□□□□□ -2.35
IGHV6-1A0A0B4J1U7 RNU11-2P-201ENST00000516898 142 ntBASIC0.38□□□□□ -2.35
IGHV6-1A0A0B4J1U7 RNU2-12P-201ENST00000517216 168 ntBASIC0.38□□□□□ -2.35
IGHV6-1A0A0B4J1U7 AC022616.4-201ENST00000522985 181 ntBASIC0.38□□□□□ -2.35
IGHV6-1A0A0B4J1U7 AC036111.3-201ENST00000526389 112 ntBASIC0.38□□□□□ -2.35
IGHV6-1A0A0B4J1U7 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.38□□□□□ -2.35
IGHV6-1A0A0B4J1U7 Z83818.1-201ENST00000603584 150 ntBASIC0.38□□□□□ -2.35
IGHV6-1A0A0B4J1U7 AC108706.1-201ENST00000611053 297 ntBASIC0.38□□□□□ -2.35
IGHV6-1A0A0B4J1U7 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.38□□□□□ -2.35
IGHV6-1A0A0B4J1U7 MIR6835-201ENST00000621552 64 ntBASIC0.38□□□□□ -2.35
IGHV6-1A0A0B4J1U7 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
IGHV6-1A0A0B4J1U7 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.37□□□□□ -2.35
IGHV6-1A0A0B4J1U7 RNU6-1084P-201ENST00000362498 107 ntBASIC0.37□□□□□ -2.35
IGHV6-1A0A0B4J1U7 RNU4-75P-201ENST00000364621 146 ntBASIC0.37□□□□□ -2.35
IGHV6-1A0A0B4J1U7 Y_RNA.295-201ENST00000364918 102 ntBASIC0.37□□□□□ -2.35
IGHV6-1A0A0B4J1U7 Y_RNA.450-201ENST00000384198 113 ntBASIC0.37□□□□□ -2.35
IGHV6-1A0A0B4J1U7 MIR522-201ENST00000385071 87 ntBASIC0.37□□□□□ -2.35
IGHV6-1A0A0B4J1U7 MIR92A1-201ENST00000385233 78 ntBASIC0.37□□□□□ -2.35
IGHV6-1A0A0B4J1U7 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.37□□□□□ -2.35
IGHV6-1A0A0B4J1U7 FGF7P8-201ENST00000402994 292 ntBASIC0.37□□□□□ -2.35
IGHV6-1A0A0B4J1U7 AL390729.2-201ENST00000416137 156 ntBASIC0.37□□□□□ -2.35
IGHV6-1A0A0B4J1U7 MLLT10P1-201ENST00000418346 262 ntBASIC0.37□□□□□ -2.35
IGHV6-1A0A0B4J1U7 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.37□□□□□ -2.35
IGHV6-1A0A0B4J1U7 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.37□□□□□ -2.35
IGHV6-1A0A0B4J1U7 Y_RNA.670-201ENST00000516255 105 ntBASIC0.37□□□□□ -2.35
IGHV6-1A0A0B4J1U7 SNORD45.4-201ENST00000516629 73 ntBASIC0.37□□□□□ -2.35
IGHV6-1A0A0B4J1U7 RNU6-113P-201ENST00000516653 101 ntBASIC0.37□□□□□ -2.35
IGHV6-1A0A0B4J1U7 Y_RNA.708-201ENST00000516950 96 ntBASIC0.37□□□□□ -2.35
IGHV6-1A0A0B4J1U7 AF235103.2-201ENST00000525753 346 ntBASIC0.37□□□□□ -2.35
IGHV6-1A0A0B4J1U7 AC093027.1-201ENST00000546698 429 ntBASIC0.37□□□□□ -2.35
IGHV6-1A0A0B4J1U7 AC011195.1-201ENST00000578177 177 ntBASIC0.37□□□□□ -2.35
IGHV6-1A0A0B4J1U7 MIR3973-201ENST00000579824 107 ntBASIC0.37□□□□□ -2.35
IGHV6-1A0A0B4J1U7 AC006380.1-201ENST00000603598 186 ntBASIC0.37□□□□□ -2.35
IGHV6-1A0A0B4J1U7 AC048344.4-201ENST00000619744 527 ntBASIC0.37□□□□□ -2.35
IGHV6-1A0A0B4J1U7 RNU6-1301P-201ENST00000362724 104 ntBASIC0.36□□□□□ -2.35
IGHV6-1A0A0B4J1U7 snoU2-30.1-201ENST00000365012 70 ntBASIC0.36□□□□□ -2.35
IGHV6-1A0A0B4J1U7 RNU6-53P-201ENST00000365367 106 ntBASIC0.36□□□□□ -2.35
IGHV6-1A0A0B4J1U7 Y_RNA.554-201ENST00000384672 102 ntBASIC0.36□□□□□ -2.35
IGHV6-1A0A0B4J1U7 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.36□□□□□ -2.35
IGHV6-1A0A0B4J1U7 MRPS18CP6-201ENST00000423587 223 ntBASIC0.36□□□□□ -2.35
IGHV6-1A0A0B4J1U7 AC244098.3-201ENST00000424803 96 ntBASIC0.36□□□□□ -2.35
IGHV6-1A0A0B4J1U7 MTND1P4-201ENST00000435196 415 ntBASIC0.36□□□□□ -2.35
IGHV6-1A0A0B4J1U7 SNORD123-201ENST00000459473 70 ntBASIC0.36□□□□□ -2.35
IGHV6-1A0A0B4J1U7 RNU6-408P-201ENST00000515910 100 ntBASIC0.36□□□□□ -2.35
IGHV6-1A0A0B4J1U7 MIR2355-201ENST00000517199 87 ntBASIC0.36□□□□□ -2.35
IGHV6-1A0A0B4J1U7 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.36□□□□□ -2.35
IGHV6-1A0A0B4J1U7 AC004467.1-201ENST00000615678 330 ntBASIC0.36□□□□□ -2.35
IGHV6-1A0A0B4J1U7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
IGHV6-1A0A0B4J1U7 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
IGHV6-1A0A0B4J1U7 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
IGHV6-1A0A0B4J1U7 RNA5SP99-201ENST00000364020 114 ntBASIC0.35□□□□□ -2.35
IGHV6-1A0A0B4J1U7 RNU4-24P-201ENST00000364565 139 ntBASIC0.35□□□□□ -2.35
IGHV6-1A0A0B4J1U7 SNORD113.3-201ENST00000364630 78 ntBASIC0.35□□□□□ -2.35
IGHV6-1A0A0B4J1U7 RNU6-1237P-201ENST00000384777 107 ntBASIC0.35□□□□□ -2.35
IGHV6-1A0A0B4J1U7 SNORD105-201ENST00000386910 85 ntBASIC0.35□□□□□ -2.35
IGHV6-1A0A0B4J1U7 AL031003.1-201ENST00000404229 172 ntBASIC0.35□□□□□ -2.35
IGHV6-1A0A0B4J1U7 MIR548F5-201ENST00000408421 86 ntBASIC0.35□□□□□ -2.35
IGHV6-1A0A0B4J1U7 MIR1827-201ENST00000408549 66 ntBASIC0.35□□□□□ -2.35
IGHV6-1A0A0B4J1U7 RNA5SP222-201ENST00000411039 105 ntBASIC0.35□□□□□ -2.35
IGHV6-1A0A0B4J1U7 RNU6-1304P-201ENST00000411374 106 ntBASIC0.35□□□□□ -2.35
IGHV6-1A0A0B4J1U7 AC004941.2-201ENST00000427009 228 ntBASIC0.35□□□□□ -2.35
IGHV6-1A0A0B4J1U7 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.35□□□□□ -2.35
IGHV6-1A0A0B4J1U7 RPS3AP52-201ENST00000435639 297 ntBASIC0.35□□□□□ -2.35
IGHV6-1A0A0B4J1U7 snoU13.23-201ENST00000458863 104 ntBASIC0.35□□□□□ -2.35
IGHV6-1A0A0B4J1U7 AC015712.3-201ENST00000559380 164 ntBASIC0.35□□□□□ -2.35
IGHV6-1A0A0B4J1U7 AC027514.1-201ENST00000588561 1603 ntBASIC0.35□□□□□ -2.35
IGHV6-1A0A0B4J1U7 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.34□□□□□ -2.35
IGHV6-1A0A0B4J1U7 SNORA36.2-201ENST00000384004 127 ntBASIC0.34□□□□□ -2.36
IGHV6-1A0A0B4J1U7 RNU6-601P-201ENST00000384540 107 ntBASIC0.34□□□□□ -2.36
IGHV6-1A0A0B4J1U7 MIR508-201ENST00000384857 115 ntBASIC0.34□□□□□ -2.36
IGHV6-1A0A0B4J1U7 RNU6-131P-201ENST00000391144 107 ntBASIC0.34□□□□□ -2.36
IGHV6-1A0A0B4J1U7 MIR548K-201ENST00000408406 116 ntBASIC0.34□□□□□ -2.36
IGHV6-1A0A0B4J1U7 AC005534.2-201ENST00000431047 433 ntBASIC0.34□□□□□ -2.36
IGHV6-1A0A0B4J1U7 U8.19-201ENST00000459095 133 ntBASIC0.34□□□□□ -2.36
IGHV6-1A0A0B4J1U7 RNU6-329P-201ENST00000459618 107 ntBASIC0.34□□□□□ -2.36
IGHV6-1A0A0B4J1U7 RPL7P42-201ENST00000481005 679 ntBASIC0.34□□□□□ -2.36
IGHV6-1A0A0B4J1U7 RPS29P25-201ENST00000481709 171 ntBASIC0.34□□□□□ -2.36
IGHV6-1A0A0B4J1U7 RNU6-307P-201ENST00000516743 106 ntBASIC0.34□□□□□ -2.36
IGHV6-1A0A0B4J1U7 MIR4300-201ENST00000581016 96 ntBASIC0.34□□□□□ -2.36
IGHV6-1A0A0B4J1U7 AC005899.2-201ENST00000584353 90 ntBASIC0.34□□□□□ -2.36
IGHV6-1A0A0B4J1U7 MIR1244-1-201ENST00000612829 85 ntBASIC0.34□□□□□ -2.36
IGHV6-1A0A0B4J1U7 AC092794.2-201ENST00000620933 563 ntBASIC0.34□□□□□ -2.36
IGHV6-1A0A0B4J1U7 AC008133.2-201ENST00000624540 351 ntBASIC0.34□□□□□ -2.36
IGHV6-1A0A0B4J1U7 MIR1244-3-201ENST00000635744 85 ntBASIC0.34□□□□□ -2.36
IGHV6-1A0A0B4J1U7 MIR4251-201ENST00000635819 61 ntBASIC0.34□□□□□ -2.36
IGHV6-1A0A0B4J1U7 MIR1244-2-201ENST00000636449 85 ntBASIC0.34□□□□□ -2.36
IGHV6-1A0A0B4J1U7 MIR1244-4-202ENST00000636813 85 ntBASIC0.34□□□□□ -2.36
IGHV6-1A0A0B4J1U7 AC134026.1-201ENST00000623249 2239 ntBASIC0.34□□□□□ -2.36
IGHV6-1A0A0B4J1U7 RNU6-654P-201ENST00000364373 107 ntBASIC0.33□□□□□ -2.36
IGHV6-1A0A0B4J1U7 SNORA2B-201ENST00000384583 137 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms