Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
PCDHGB1Q9Y5G3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
PCDHGB1Q9Y5G3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
PCDHGB1Q9Y5G3 MIR1294-201ENST00000408503 142 ntBASIC2.07□□□□□ -2.08
PCDHGB1Q9Y5G3 RNU2-48P-201ENST00000410694 191 ntBASIC2.07□□□□□ -2.08
PCDHGB1Q9Y5G3 RNU4-61P-201ENST00000411243 107 ntBASIC2.07□□□□□ -2.08
PCDHGB1Q9Y5G3 AC016717.1-201ENST00000448918 286 ntBASIC2.07□□□□□ -2.08
PCDHGB1Q9Y5G3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.07□□□□□ -2.08
PCDHGB1Q9Y5G3 RNU6-717P-201ENST00000459076 104 ntBASIC2.07□□□□□ -2.08
PCDHGB1Q9Y5G3 RNA5SP233-201ENST00000459153 113 ntBASIC2.07□□□□□ -2.08
PCDHGB1Q9Y5G3 RPS27P21-201ENST00000486977 252 ntBASIC2.07□□□□□ -2.08
PCDHGB1Q9Y5G3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.07□□□□□ -2.08
PCDHGB1Q9Y5G3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.07□□□□□ -2.08
PCDHGB1Q9Y5G3 MIR514B-201ENST00000516774 80 ntBASIC2.07□□□□□ -2.08
PCDHGB1Q9Y5G3 RNU6-586P-201ENST00000517265 104 ntBASIC2.07□□□□□ -2.08
PCDHGB1Q9Y5G3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.07□□□□□ -2.08
PCDHGB1Q9Y5G3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.07□□□□□ -2.08
PCDHGB1Q9Y5G3 AC015712.3-201ENST00000559380 164 ntBASIC2.07□□□□□ -2.08
PCDHGB1Q9Y5G3 MIR4648-201ENST00000580107 72 ntBASIC2.07□□□□□ -2.08
PCDHGB1Q9Y5G3 AC006380.1-201ENST00000603598 186 ntBASIC2.07□□□□□ -2.08
PCDHGB1Q9Y5G3 AC072026.1-201ENST00000605023 201 ntBASIC2.07□□□□□ -2.08
PCDHGB1Q9Y5G3 RPL17P51-201ENST00000605218 238 ntBASIC2.07□□□□□ -2.08
PCDHGB1Q9Y5G3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
PCDHGB1Q9Y5G3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.07□□□□□ -2.08
PCDHGB1Q9Y5G3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
PCDHGB1Q9Y5G3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
PCDHGB1Q9Y5G3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
PCDHGB1Q9Y5G3 AC134026.1-201ENST00000623249 2239 ntBASIC2.06□□□□□ -2.08
PCDHGB1Q9Y5G3 Y_RNA.240-201ENST00000364469 95 ntBASIC2.06□□□□□ -2.08
PCDHGB1Q9Y5G3 Y_RNA.310-201ENST00000365063 113 ntBASIC2.06□□□□□ -2.08
PCDHGB1Q9Y5G3 Y_RNA.435-201ENST00000384095 112 ntBASIC2.06□□□□□ -2.08
PCDHGB1Q9Y5G3 RNU6-187P-201ENST00000384139 106 ntBASIC2.06□□□□□ -2.08
PCDHGB1Q9Y5G3 MIR1289-2-201ENST00000408360 111 ntBASIC2.06□□□□□ -2.08
PCDHGB1Q9Y5G3 AL135786.1-201ENST00000415892 214 ntBASIC2.06□□□□□ -2.08
PCDHGB1Q9Y5G3 AC016909.1-201ENST00000415916 166 ntBASIC2.06□□□□□ -2.08
PCDHGB1Q9Y5G3 AL591806.2-201ENST00000433122 173 ntBASIC2.06□□□□□ -2.08
PCDHGB1Q9Y5G3 AC025033.1-201ENST00000463883 194 ntBASIC2.06□□□□□ -2.08
PCDHGB1Q9Y5G3 Y_RNA.676-201ENST00000516393 96 ntBASIC2.06□□□□□ -2.08
PCDHGB1Q9Y5G3 AC136628.3-201ENST00000521868 290 ntBASIC2.06□□□□□ -2.08
PCDHGB1Q9Y5G3 AC100767.1-201ENST00000528178 123 ntBASIC2.06□□□□□ -2.08
PCDHGB1Q9Y5G3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.06□□□□□ -2.08
PCDHGB1Q9Y5G3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.06□□□□□ -2.08
PCDHGB1Q9Y5G3 MIR5692C2-201ENST00000577959 77 ntBASIC2.06□□□□□ -2.08
PCDHGB1Q9Y5G3 MIR5007-201ENST00000583098 95 ntBASIC2.06□□□□□ -2.08
PCDHGB1Q9Y5G3 AL078604.3-201ENST00000615580 211 ntBASIC2.06□□□□□ -2.08
PCDHGB1Q9Y5G3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.06□□□□□ -2.08
PCDHGB1Q9Y5G3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.06□□□□□ -2.08
PCDHGB1Q9Y5G3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.06□□□□□ -2.08
PCDHGB1Q9Y5G3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
PCDHGB1Q9Y5G3 MIR340-201ENST00000362125 95 ntBASIC2.05□□□□□ -2.08
PCDHGB1Q9Y5G3 RNU4-10P-201ENST00000364383 140 ntBASIC2.05□□□□□ -2.08
PCDHGB1Q9Y5G3 Y_RNA.368-201ENST00000365547 113 ntBASIC2.05□□□□□ -2.08
PCDHGB1Q9Y5G3 SNORA72.4-201ENST00000384174 132 ntBASIC2.05□□□□□ -2.08
PCDHGB1Q9Y5G3 RNU6-975P-201ENST00000384296 105 ntBASIC2.05□□□□□ -2.08
PCDHGB1Q9Y5G3 SNORD14D-201ENST00000384390 87 ntBASIC2.05□□□□□ -2.08
PCDHGB1Q9Y5G3 RNU6-125P-201ENST00000384505 107 ntBASIC2.05□□□□□ -2.08
PCDHGB1Q9Y5G3 MIR518C-201ENST00000384822 101 ntBASIC2.05□□□□□ -2.08
PCDHGB1Q9Y5G3 MIR95-201ENST00000385072 81 ntBASIC2.05□□□□□ -2.08
PCDHGB1Q9Y5G3 MIR764-201ENST00000390811 85 ntBASIC2.05□□□□□ -2.08
PCDHGB1Q9Y5G3 AL357139.1-201ENST00000407792 426 ntBASIC2.05□□□□□ -2.08
PCDHGB1Q9Y5G3 RNA5SP338-201ENST00000410495 85 ntBASIC2.05□□□□□ -2.08
PCDHGB1Q9Y5G3 RNU5E-9P-201ENST00000411164 104 ntBASIC2.05□□□□□ -2.08
PCDHGB1Q9Y5G3 AC016925.1-201ENST00000458303 298 ntBASIC2.05□□□□□ -2.08
PCDHGB1Q9Y5G3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.05□□□□□ -2.08
PCDHGB1Q9Y5G3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.05□□□□□ -2.08
PCDHGB1Q9Y5G3 MIR4448-201ENST00000584360 86 ntBASIC2.05□□□□□ -2.08
PCDHGB1Q9Y5G3 U4atac.1-201ENST00000618345 95 ntBASIC2.05□□□□□ -2.08
PCDHGB1Q9Y5G3 AC021753.1-201ENST00000635724 168 ntBASIC2.05□□□□□ -2.08
PCDHGB1Q9Y5G3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
PCDHGB1Q9Y5G3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.05□□□□□ -2.08
PCDHGB1Q9Y5G3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.05□□□□□ -2.08
PCDHGB1Q9Y5G3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
PCDHGB1Q9Y5G3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
PCDHGB1Q9Y5G3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.04□□□□□ -2.08
PCDHGB1Q9Y5G3 Y_RNA.262-201ENST00000364641 102 ntBASIC2.04□□□□□ -2.08
PCDHGB1Q9Y5G3 SNORD31B-201ENST00000364977 69 ntBASIC2.04□□□□□ -2.08
PCDHGB1Q9Y5G3 RNA5SP138-201ENST00000365098 114 ntBASIC2.04□□□□□ -2.08
PCDHGB1Q9Y5G3 SNORA20B-201ENST00000384220 132 ntBASIC2.04□□□□□ -2.08
PCDHGB1Q9Y5G3 Y_RNA.506-201ENST00000384494 102 ntBASIC2.04□□□□□ -2.08
PCDHGB1Q9Y5G3 Y_RNA.572-201ENST00000384757 98 ntBASIC2.04□□□□□ -2.08
PCDHGB1Q9Y5G3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
PCDHGB1Q9Y5G3 AL356379.1-201ENST00000414105 126 ntBASIC2.04□□□□□ -2.08
PCDHGB1Q9Y5G3 RPS15AP28-201ENST00000435088 386 ntBASIC2.04□□□□□ -2.08
PCDHGB1Q9Y5G3 AC018634.1-201ENST00000437554 401 ntBASIC2.04□□□□□ -2.08
PCDHGB1Q9Y5G3 RNU7-57P-201ENST00000459540 60 ntBASIC2.04□□□□□ -2.08
PCDHGB1Q9Y5G3 RNU6-221P-201ENST00000459541 99 ntBASIC2.04□□□□□ -2.08
PCDHGB1Q9Y5G3 RNU1-40P-201ENST00000516816 164 ntBASIC2.04□□□□□ -2.08
PCDHGB1Q9Y5G3 RNU1-97P-201ENST00000516872 164 ntBASIC2.04□□□□□ -2.08
PCDHGB1Q9Y5G3 MTND5P41-201ENST00000517498 206 ntBASIC2.04□□□□□ -2.08
PCDHGB1Q9Y5G3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.04□□□□□ -2.08
PCDHGB1Q9Y5G3 AC021269.2-201ENST00000532318 330 ntBASIC2.04□□□□□ -2.08
PCDHGB1Q9Y5G3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.04□□□□□ -2.08
PCDHGB1Q9Y5G3 AC103810.6-201ENST00000606708 136 ntBASIC2.04□□□□□ -2.08
PCDHGB1Q9Y5G3 AC069294.1-201ENST00000608397 350 ntBASIC2.04□□□□□ -2.08
PCDHGB1Q9Y5G3 U6.106-201ENST00000636360 105 ntBASIC2.04□□□□□ -2.08
PCDHGB1Q9Y5G3 AC008555.8-201ENST00000623602 2168 ntBASIC2.03□□□□□ -2.08
PCDHGB1Q9Y5G3 AP006437.1-201ENST00000641440 3685 ntBASIC2.03□□□□□ -2.08
PCDHGB1Q9Y5G3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
PCDHGB1Q9Y5G3 Y_RNA.170-201ENST00000363746 110 ntBASIC2.03□□□□□ -2.08
PCDHGB1Q9Y5G3 RNA5SP99-201ENST00000364020 114 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms