Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 AC093534.1-201ENST00000504977 132 ntBASIC0.6□□□□□ -2.31
LRRC42Q9Y546 SNORA70.12-201ENST00000516084 153 ntBASIC0.6□□□□□ -2.31
LRRC42Q9Y546 Y_RNA.682-201ENST00000516457 100 ntBASIC0.6□□□□□ -2.31
LRRC42Q9Y546 RNU6-1016P-201ENST00000516689 94 ntBASIC0.6□□□□□ -2.31
LRRC42Q9Y546 AC090142.3-201ENST00000519012 385 ntBASIC0.6□□□□□ -2.31
LRRC42Q9Y546 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.6□□□□□ -2.31
LRRC42Q9Y546 MIR4298-201ENST00000584380 73 ntBASIC0.6□□□□□ -2.31
LRRC42Q9Y546 MIR3192-201ENST00000584920 77 ntBASIC0.6□□□□□ -2.31
LRRC42Q9Y546 FAM106DP-201ENST00000586416 501 ntBASIC0.6□□□□□ -2.31
LRRC42Q9Y546 AC012557.2-201ENST00000605919 418 ntBASIC0.6□□□□□ -2.31
LRRC42Q9Y546 AC242852.1-201ENST00000612151 96 ntBASIC0.6□□□□□ -2.31
LRRC42Q9Y546 AC244015.1-201ENST00000622301 99 ntBASIC0.6□□□□□ -2.31
LRRC42Q9Y546 AL008636.1-201ENST00000625038 1018 ntBASIC0.6□□□□□ -2.31
LRRC42Q9Y546 MIR3674-201ENST00000636576 68 ntBASIC0.6□□□□□ -2.31
LRRC42Q9Y546 RNU6-833P-201ENST00000363486 107 ntBASIC0.59□□□□□ -2.31
LRRC42Q9Y546 Y_RNA.336-201ENST00000365307 109 ntBASIC0.59□□□□□ -2.31
LRRC42Q9Y546 Y_RNA.436-201ENST00000384097 102 ntBASIC0.59□□□□□ -2.31
LRRC42Q9Y546 Y_RNA.498-201ENST00000384460 102 ntBASIC0.59□□□□□ -2.31
LRRC42Q9Y546 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
LRRC42Q9Y546 RNU6-700P-201ENST00000391043 107 ntBASIC0.59□□□□□ -2.31
LRRC42Q9Y546 MIR891A-201ENST00000401237 79 ntBASIC0.59□□□□□ -2.31
LRRC42Q9Y546 Y_RNA.594-201ENST00000410373 140 ntBASIC0.59□□□□□ -2.31
LRRC42Q9Y546 AC016907.1-201ENST00000419483 435 ntBASIC0.59□□□□□ -2.31
LRRC42Q9Y546 MTCYBP10-201ENST00000424905 650 ntBASIC0.59□□□□□ -2.31
LRRC42Q9Y546 AL353997.1-201ENST00000432936 108 ntBASIC0.59□□□□□ -2.31
LRRC42Q9Y546 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.59□□□□□ -2.31
LRRC42Q9Y546 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.59□□□□□ -2.31
LRRC42Q9Y546 CYCTP-201ENST00000504253 315 ntBASIC0.59□□□□□ -2.31
LRRC42Q9Y546 SNORA40.9-201ENST00000515895 93 ntBASIC0.59□□□□□ -2.31
LRRC42Q9Y546 Y_RNA.670-201ENST00000516255 105 ntBASIC0.59□□□□□ -2.31
LRRC42Q9Y546 RNA5SP255-201ENST00000516370 107 ntBASIC0.59□□□□□ -2.31
LRRC42Q9Y546 RNU6-63P-201ENST00000516690 95 ntBASIC0.59□□□□□ -2.31
LRRC42Q9Y546 AP003484.1-201ENST00000530974 250 ntBASIC0.59□□□□□ -2.31
LRRC42Q9Y546 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.59□□□□□ -2.31
LRRC42Q9Y546 MIR3973-201ENST00000579824 107 ntBASIC0.59□□□□□ -2.31
LRRC42Q9Y546 AC120024.3-201ENST00000603167 156 ntBASIC0.59□□□□□ -2.31
LRRC42Q9Y546 AL590095.2-201ENST00000604136 117 ntBASIC0.59□□□□□ -2.31
LRRC42Q9Y546 AC080013.6-201ENST00000606185 215 ntBASIC0.59□□□□□ -2.31
LRRC42Q9Y546 MIR6835-201ENST00000621552 64 ntBASIC0.59□□□□□ -2.31
LRRC42Q9Y546 AL359757.2-201ENST00000624309 274 ntBASIC0.59□□□□□ -2.31
LRRC42Q9Y546 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
LRRC42Q9Y546 RNY1P16-201ENST00000363063 111 ntBASIC0.58□□□□□ -2.32
LRRC42Q9Y546 Y_RNA.361-201ENST00000365515 120 ntBASIC0.58□□□□□ -2.32
LRRC42Q9Y546 RNU6-110P-201ENST00000384508 104 ntBASIC0.58□□□□□ -2.32
LRRC42Q9Y546 Y_RNA.573-201ENST00000384763 105 ntBASIC0.58□□□□□ -2.32
LRRC42Q9Y546 MIR605-201ENST00000385078 83 ntBASIC0.58□□□□□ -2.32
LRRC42Q9Y546 AC074085.1-201ENST00000413598 418 ntBASIC0.58□□□□□ -2.32
LRRC42Q9Y546 UBE2V1P7-201ENST00000446395 340 ntBASIC0.58□□□□□ -2.32
LRRC42Q9Y546 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.58□□□□□ -2.32
LRRC42Q9Y546 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.58□□□□□ -2.32
LRRC42Q9Y546 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.58□□□□□ -2.32
LRRC42Q9Y546 SUMO1P2-201ENST00000452524 304 ntBASIC0.58□□□□□ -2.32
LRRC42Q9Y546 RNU7-90P-201ENST00000459216 62 ntBASIC0.58□□□□□ -2.32
LRRC42Q9Y546 RNU6-329P-201ENST00000459618 107 ntBASIC0.58□□□□□ -2.32
LRRC42Q9Y546 AC117454.1-201ENST00000491120 168 ntBASIC0.58□□□□□ -2.32
LRRC42Q9Y546 RNU6-720P-201ENST00000516363 108 ntBASIC0.58□□□□□ -2.32
LRRC42Q9Y546 AC022868.1-201ENST00000517767 391 ntBASIC0.58□□□□□ -2.32
LRRC42Q9Y546 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.58□□□□□ -2.32
LRRC42Q9Y546 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.58□□□□□ -2.32
LRRC42Q9Y546 MIR4781-201ENST00000585250 76 ntBASIC0.58□□□□□ -2.32
LRRC42Q9Y546 AC068790.6-201ENST00000602558 258 ntBASIC0.58□□□□□ -2.32
LRRC42Q9Y546 AC093913.1-201ENST00000614178 329 ntBASIC0.58□□□□□ -2.32
LRRC42Q9Y546 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
LRRC42Q9Y546 MIR3688-2-201ENST00000636963 87 ntBASIC0.58□□□□□ -2.32
LRRC42Q9Y546 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
LRRC42Q9Y546 MIR337-201ENST00000362281 93 ntBASIC0.57□□□□□ -2.32
LRRC42Q9Y546 Y_RNA.2-201ENST00000362330 96 ntBASIC0.57□□□□□ -2.32
LRRC42Q9Y546 Y_RNA.3-201ENST00000362331 103 ntBASIC0.57□□□□□ -2.32
LRRC42Q9Y546 SNORD114-7-201ENST00000362520 77 ntBASIC0.57□□□□□ -2.32
LRRC42Q9Y546 Y_RNA.243-201ENST00000364481 109 ntBASIC0.57□□□□□ -2.32
LRRC42Q9Y546 RNU6-593P-201ENST00000364716 112 ntBASIC0.57□□□□□ -2.32
LRRC42Q9Y546 RNU6-136P-201ENST00000384663 107 ntBASIC0.57□□□□□ -2.32
LRRC42Q9Y546 MIR520E-201ENST00000384867 87 ntBASIC0.57□□□□□ -2.32
LRRC42Q9Y546 MIR548K-201ENST00000408406 116 ntBASIC0.57□□□□□ -2.32
LRRC42Q9Y546 RNU6-1050P-201ENST00000410388 107 ntBASIC0.57□□□□□ -2.32
LRRC42Q9Y546 RNU6-321P-201ENST00000410912 106 ntBASIC0.57□□□□□ -2.32
LRRC42Q9Y546 PIGPP3-201ENST00000425307 415 ntBASIC0.57□□□□□ -2.32
LRRC42Q9Y546 RPEP5-201ENST00000441137 268 ntBASIC0.57□□□□□ -2.32
LRRC42Q9Y546 AC016727.1-205ENST00000605437 569 ntBASIC0.57□□□□□ -2.32
LRRC42Q9Y546 U4.5-201ENST00000617137 123 ntBASIC0.57□□□□□ -2.32
LRRC42Q9Y546 AC027279.3-201ENST00000625055 122 ntBASIC0.57□□□□□ -2.32
LRRC42Q9Y546 CASC19-280ENST00000642102 1351 ntBASIC0.57□□□□□ -2.32
LRRC42Q9Y546 Y_RNA.358-201ENST00000365491 99 ntBASIC0.56□□□□□ -2.32
LRRC42Q9Y546 RNU6-163P-201ENST00000384396 106 ntBASIC0.56□□□□□ -2.32
LRRC42Q9Y546 Y_RNA.516-201ENST00000384541 124 ntBASIC0.56□□□□□ -2.32
LRRC42Q9Y546 MIR548F5-201ENST00000408421 86 ntBASIC0.56□□□□□ -2.32
LRRC42Q9Y546 RNA5SP475-201ENST00000410568 110 ntBASIC0.56□□□□□ -2.32
LRRC42Q9Y546 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.56□□□□□ -2.32
LRRC42Q9Y546 AL354751.2-201ENST00000415471 210 ntBASIC0.56□□□□□ -2.32
LRRC42Q9Y546 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.56□□□□□ -2.32
LRRC42Q9Y546 RPS3AP52-201ENST00000435639 297 ntBASIC0.56□□□□□ -2.32
LRRC42Q9Y546 AL157398.1-201ENST00000452981 186 ntBASIC0.56□□□□□ -2.32
LRRC42Q9Y546 ELOCP24-201ENST00000456370 334 ntBASIC0.56□□□□□ -2.32
LRRC42Q9Y546 AC023442.1-201ENST00000531247 422 ntBASIC0.56□□□□□ -2.32
LRRC42Q9Y546 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.56□□□□□ -2.32
LRRC42Q9Y546 AC018638.8-201ENST00000588755 281 ntBASIC0.56□□□□□ -2.32
LRRC42Q9Y546 BNIP3P10-201ENST00000605360 577 ntBASIC0.56□□□□□ -2.32
LRRC42Q9Y546 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.56□□□□□ -2.32
LRRC42Q9Y546 AC090517.2-201ENST00000614966 680 ntBASIC0.56□□□□□ -2.32
LRRC42Q9Y546 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms