Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 MIR4452-201ENST00000583004 71 ntBASIC1.14□□□□□ -2.23
UBQLN1Q9UMX0 AL132765.2-201ENST00000610812 351 ntBASIC1.14□□□□□ -2.23
UBQLN1Q9UMX0 Y_RNA.243-201ENST00000364481 109 ntBASIC1.13□□□□□ -2.23
UBQLN1Q9UMX0 Y_RNA.387-201ENST00000383918 102 ntBASIC1.13□□□□□ -2.23
UBQLN1Q9UMX0 RNU6-1080P-201ENST00000383982 107 ntBASIC1.13□□□□□ -2.23
UBQLN1Q9UMX0 RNU6-1297P-201ENST00000384415 104 ntBASIC1.13□□□□□ -2.23
UBQLN1Q9UMX0 MIR559-201ENST00000385188 96 ntBASIC1.13□□□□□ -2.23
UBQLN1Q9UMX0 MIR1285-1-201ENST00000408593 84 ntBASIC1.13□□□□□ -2.23
UBQLN1Q9UMX0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.13□□□□□ -2.23
UBQLN1Q9UMX0 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.13□□□□□ -2.23
UBQLN1Q9UMX0 MRPS18CP6-201ENST00000423587 223 ntBASIC1.13□□□□□ -2.23
UBQLN1Q9UMX0 AC018865.2-201ENST00000423631 129 ntBASIC1.13□□□□□ -2.23
UBQLN1Q9UMX0 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.13□□□□□ -2.23
UBQLN1Q9UMX0 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.13□□□□□ -2.23
UBQLN1Q9UMX0 AC091951.2-201ENST00000500762 203 ntBASIC1.13□□□□□ -2.23
UBQLN1Q9UMX0 AC105758.1-201ENST00000506038 399 ntBASIC1.13□□□□□ -2.23
UBQLN1Q9UMX0 RNU7-4P-201ENST00000516961 62 ntBASIC1.13□□□□□ -2.23
UBQLN1Q9UMX0 AC005730.3-201ENST00000583067 366 ntBASIC1.13□□□□□ -2.23
UBQLN1Q9UMX0 AL078603.1-201ENST00000603824 313 ntBASIC1.13□□□□□ -2.23
UBQLN1Q9UMX0 SNORD114-21-201ENST00000606412 72 ntBASIC1.13□□□□□ -2.23
UBQLN1Q9UMX0 AC138305.3-201ENST00000624988 240 ntBASIC1.13□□□□□ -2.23
UBQLN1Q9UMX0 MIR6079-201ENST00000635807 62 ntBASIC1.13□□□□□ -2.23
UBQLN1Q9UMX0 SNORD114-7-201ENST00000362520 77 ntBASIC1.12□□□□□ -2.23
UBQLN1Q9UMX0 RNU6-117P-201ENST00000365415 107 ntBASIC1.12□□□□□ -2.23
UBQLN1Q9UMX0 SNORD114-22-201ENST00000365423 72 ntBASIC1.12□□□□□ -2.23
UBQLN1Q9UMX0 RNA5SP259-201ENST00000365541 109 ntBASIC1.12□□□□□ -2.23
UBQLN1Q9UMX0 RNY3P4-201ENST00000384428 101 ntBASIC1.12□□□□□ -2.23
UBQLN1Q9UMX0 MIR513A1-201ENST00000385138 129 ntBASIC1.12□□□□□ -2.23
UBQLN1Q9UMX0 RNY4P36-201ENST00000391116 96 ntBASIC1.12□□□□□ -2.23
UBQLN1Q9UMX0 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.12□□□□□ -2.23
UBQLN1Q9UMX0 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.12□□□□□ -2.23
UBQLN1Q9UMX0 AL137792.2-201ENST00000443484 235 ntBASIC1.12□□□□□ -2.23
UBQLN1Q9UMX0 RPL30P15-201ENST00000457129 321 ntBASIC1.12□□□□□ -2.23
UBQLN1Q9UMX0 RNA5SP20-201ENST00000515976 84 ntBASIC1.12□□□□□ -2.23
UBQLN1Q9UMX0 RNU7-172P-201ENST00000517125 64 ntBASIC1.12□□□□□ -2.23
UBQLN1Q9UMX0 AC019288.1-201ENST00000557918 224 ntBASIC1.12□□□□□ -2.23
UBQLN1Q9UMX0 AC091178.2-201ENST00000584401 117 ntBASIC1.12□□□□□ -2.23
UBQLN1Q9UMX0 AL365434.2-201ENST00000607979 234 ntBASIC1.12□□□□□ -2.23
UBQLN1Q9UMX0 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.12□□□□□ -2.23
UBQLN1Q9UMX0 MTND4LP32-201ENST00000636111 270 ntBASIC1.12□□□□□ -2.23
UBQLN1Q9UMX0 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
UBQLN1Q9UMX0 MIR96-201ENST00000362288 78 ntBASIC1.11□□□□□ -2.23
UBQLN1Q9UMX0 RNU6-961P-201ENST00000363893 105 ntBASIC1.11□□□□□ -2.23
UBQLN1Q9UMX0 RNU6-1310P-201ENST00000384153 107 ntBASIC1.11□□□□□ -2.23
UBQLN1Q9UMX0 RNY1P14-201ENST00000384426 108 ntBASIC1.11□□□□□ -2.23
UBQLN1Q9UMX0 MIR873-201ENST00000401120 77 ntBASIC1.11□□□□□ -2.23
UBQLN1Q9UMX0 RNA5SP475-201ENST00000410568 110 ntBASIC1.11□□□□□ -2.23
UBQLN1Q9UMX0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.11□□□□□ -2.23
UBQLN1Q9UMX0 SUMO1P2-201ENST00000452524 304 ntBASIC1.11□□□□□ -2.23
UBQLN1Q9UMX0 RNU7-152P-201ENST00000458982 64 ntBASIC1.11□□□□□ -2.23
UBQLN1Q9UMX0 RPL30P7-201ENST00000479312 323 ntBASIC1.11□□□□□ -2.23
UBQLN1Q9UMX0 Y_RNA.718-201ENST00000517110 102 ntBASIC1.11□□□□□ -2.23
UBQLN1Q9UMX0 RNU2-12P-201ENST00000517216 168 ntBASIC1.11□□□□□ -2.23
UBQLN1Q9UMX0 AL162424.1-201ENST00000602325 221 ntBASIC1.11□□□□□ -2.23
UBQLN1Q9UMX0 RBM11P1-201ENST00000604951 799 ntBASIC1.11□□□□□ -2.23
UBQLN1Q9UMX0 AC040896.1-201ENST00000613819 479 ntBASIC1.11□□□□□ -2.23
UBQLN1Q9UMX0 AC133104.2-201ENST00000615272 193 ntBASIC1.11□□□□□ -2.23
UBQLN1Q9UMX0 MIR6734-201ENST00000621166 68 ntBASIC1.11□□□□□ -2.23
UBQLN1Q9UMX0 AL513423.1-201ENST00000621695 132 ntBASIC1.11□□□□□ -2.23
UBQLN1Q9UMX0 MIR1302-1-201ENST00000637932 143 ntBASIC1.11□□□□□ -2.23
UBQLN1Q9UMX0 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
UBQLN1Q9UMX0 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.1□□□□□ -2.23
UBQLN1Q9UMX0 RNU6-490P-201ENST00000362985 107 ntBASIC1.1□□□□□ -2.23
UBQLN1Q9UMX0 Y_RNA.124-201ENST00000363339 93 ntBASIC1.1□□□□□ -2.23
UBQLN1Q9UMX0 SNORD114-27-201ENST00000363766 70 ntBASIC1.1□□□□□ -2.23
UBQLN1Q9UMX0 RNU6-407P-201ENST00000365280 104 ntBASIC1.1□□□□□ -2.23
UBQLN1Q9UMX0 Y_RNA.466-201ENST00000384294 113 ntBASIC1.1□□□□□ -2.23
UBQLN1Q9UMX0 AL034345.1-201ENST00000407768 123 ntBASIC1.1□□□□□ -2.23
UBQLN1Q9UMX0 PGBD4P5-201ENST00000445958 426 ntBASIC1.1□□□□□ -2.23
UBQLN1Q9UMX0 RPS29P28-201ENST00000446439 141 ntBASIC1.1□□□□□ -2.23
UBQLN1Q9UMX0 RNU6-408P-201ENST00000515910 100 ntBASIC1.1□□□□□ -2.23
UBQLN1Q9UMX0 RNU6-875P-201ENST00000516488 106 ntBASIC1.1□□□□□ -2.23
UBQLN1Q9UMX0 RNU6-341P-201ENST00000516973 96 ntBASIC1.1□□□□□ -2.23
UBQLN1Q9UMX0 SUMO2P16-201ENST00000519475 264 ntBASIC1.1□□□□□ -2.23
UBQLN1Q9UMX0 AC144568.1-201ENST00000520139 137 ntBASIC1.1□□□□□ -2.23
UBQLN1Q9UMX0 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.1□□□□□ -2.23
UBQLN1Q9UMX0 AC055872.1-201ENST00000570978 278 ntBASIC1.1□□□□□ -2.23
UBQLN1Q9UMX0 AL021879.1-201ENST00000611756 288 ntBASIC1.1□□□□□ -2.23
UBQLN1Q9UMX0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.1□□□□□ -2.23
UBQLN1Q9UMX0 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
UBQLN1Q9UMX0 Y_RNA.70-201ENST00000362886 110 ntBASIC1.09□□□□□ -2.23
UBQLN1Q9UMX0 SNORD115-30-201ENST00000364117 82 ntBASIC1.09□□□□□ -2.23
UBQLN1Q9UMX0 RNY3P11-201ENST00000364153 102 ntBASIC1.09□□□□□ -2.23
UBQLN1Q9UMX0 Y_RNA.259-201ENST00000364619 101 ntBASIC1.09□□□□□ -2.23
UBQLN1Q9UMX0 Y_RNA.384-201ENST00000383909 102 ntBASIC1.09□□□□□ -2.23
UBQLN1Q9UMX0 RNU6-42P-201ENST00000384165 107 ntBASIC1.09□□□□□ -2.23
UBQLN1Q9UMX0 RNU6-1065P-201ENST00000384513 106 ntBASIC1.09□□□□□ -2.23
UBQLN1Q9UMX0 RNU6-939P-201ENST00000384634 107 ntBASIC1.09□□□□□ -2.23
UBQLN1Q9UMX0 MIR222-201ENST00000384992 110 ntBASIC1.09□□□□□ -2.23
UBQLN1Q9UMX0 RNU11-5P-201ENST00000391216 129 ntBASIC1.09□□□□□ -2.23
UBQLN1Q9UMX0 RNU5A-5P-201ENST00000411054 116 ntBASIC1.09□□□□□ -2.23
UBQLN1Q9UMX0 AC099799.1-201ENST00000439809 192 ntBASIC1.09□□□□□ -2.23
UBQLN1Q9UMX0 AC091021.1-201ENST00000468051 388 ntBASIC1.09□□□□□ -2.23
UBQLN1Q9UMX0 RNU6-911P-201ENST00000516523 104 ntBASIC1.09□□□□□ -2.23
UBQLN1Q9UMX0 RNU6-1012P-201ENST00000516606 109 ntBASIC1.09□□□□□ -2.23
UBQLN1Q9UMX0 RAB11AP2-201ENST00000545905 639 ntBASIC1.09□□□□□ -2.23
UBQLN1Q9UMX0 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.09□□□□□ -2.23
UBQLN1Q9UMX0 MIR4801-201ENST00000582704 82 ntBASIC1.09□□□□□ -2.23
UBQLN1Q9UMX0 AL050343.2-201ENST00000607338 280 ntBASIC1.09□□□□□ -2.23
UBQLN1Q9UMX0 AC073349.3-201ENST00000617616 186 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 229.8 ms