Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 DEFA7P-201ENST00000382676 285 ntBASIC3.06□□□□□ -1.92
DDX41Q9UJV9 SNORA36B-201ENST00000410438 131 ntBASIC3.06□□□□□ -1.92
DDX41Q9UJV9 COX6CP10-201ENST00000416832 224 ntBASIC3.06□□□□□ -1.92
DDX41Q9UJV9 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.06□□□□□ -1.92
DDX41Q9UJV9 AL162725.1-201ENST00000435405 301 ntBASIC3.06□□□□□ -1.92
DDX41Q9UJV9 AC018634.1-201ENST00000437554 401 ntBASIC3.06□□□□□ -1.92
DDX41Q9UJV9 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.06□□□□□ -1.92
DDX41Q9UJV9 RNU7-99P-201ENST00000516271 62 ntBASIC3.06□□□□□ -1.92
DDX41Q9UJV9 RNU1-142P-201ENST00000516682 145 ntBASIC3.06□□□□□ -1.92
DDX41Q9UJV9 RNA5SP137-201ENST00000516833 135 ntBASIC3.06□□□□□ -1.92
DDX41Q9UJV9 AC100767.1-201ENST00000528178 123 ntBASIC3.06□□□□□ -1.92
DDX41Q9UJV9 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.06□□□□□ -1.92
DDX41Q9UJV9 MIR4724-201ENST00000579485 89 ntBASIC3.06□□□□□ -1.92
DDX41Q9UJV9 MIR338-201ENST00000636369 67 ntBASIC3.06□□□□□ -1.92
DDX41Q9UJV9 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
DDX41Q9UJV9 MIR6073-201ENST00000352083 89 ntBASIC3.05□□□□□ -1.92
DDX41Q9UJV9 MIR26A1-201ENST00000362205 77 ntBASIC3.05□□□□□ -1.92
DDX41Q9UJV9 Y_RNA.7-201ENST00000362352 102 ntBASIC3.05□□□□□ -1.92
DDX41Q9UJV9 RNA5SP68-201ENST00000363885 119 ntBASIC3.05□□□□□ -1.92
DDX41Q9UJV9 Y_RNA.233-201ENST00000364407 101 ntBASIC3.05□□□□□ -1.92
DDX41Q9UJV9 RNU6-117P-201ENST00000365415 107 ntBASIC3.05□□□□□ -1.92
DDX41Q9UJV9 RNU6-47P-201ENST00000383866 107 ntBASIC3.05□□□□□ -1.92
DDX41Q9UJV9 Y_RNA.435-201ENST00000384095 112 ntBASIC3.05□□□□□ -1.92
DDX41Q9UJV9 RNU6-136P-201ENST00000384663 107 ntBASIC3.05□□□□□ -1.92
DDX41Q9UJV9 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
DDX41Q9UJV9 RNA5SP323-201ENST00000391094 133 ntBASIC3.05□□□□□ -1.92
DDX41Q9UJV9 RNU6-918P-201ENST00000391219 106 ntBASIC3.05□□□□□ -1.92
DDX41Q9UJV9 MIR548I3-201ENST00000408378 149 ntBASIC3.05□□□□□ -1.92
DDX41Q9UJV9 MIR548I1-201ENST00000408810 149 ntBASIC3.05□□□□□ -1.92
DDX41Q9UJV9 EBAG9P1-201ENST00000418955 543 ntBASIC3.05□□□□□ -1.92
DDX41Q9UJV9 YWHAEP4-201ENST00000505390 198 ntBASIC3.05□□□□□ -1.92
DDX41Q9UJV9 AC015720.1-201ENST00000565251 277 ntBASIC3.05□□□□□ -1.92
DDX41Q9UJV9 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.05□□□□□ -1.92
DDX41Q9UJV9 MIR4658-201ENST00000584344 65 ntBASIC3.05□□□□□ -1.92
DDX41Q9UJV9 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.05□□□□□ -1.92
DDX41Q9UJV9 RNU1-96P-201ENST00000364163 162 ntBASIC3.04□□□□□ -1.92
DDX41Q9UJV9 RNU4-70P-201ENST00000384579 139 ntBASIC3.04□□□□□ -1.92
DDX41Q9UJV9 MIR526A2-201ENST00000390198 65 ntBASIC3.04□□□□□ -1.92
DDX41Q9UJV9 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.04□□□□□ -1.92
DDX41Q9UJV9 RPL23AP54-201ENST00000495129 419 ntBASIC3.04□□□□□ -1.92
DDX41Q9UJV9 AC096725.1-201ENST00000514266 313 ntBASIC3.04□□□□□ -1.92
DDX41Q9UJV9 SNORA9.3-201ENST00000516383 129 ntBASIC3.04□□□□□ -1.92
DDX41Q9UJV9 AC021269.2-201ENST00000532318 330 ntBASIC3.04□□□□□ -1.92
DDX41Q9UJV9 AC127455.1-201ENST00000565496 145 ntBASIC3.04□□□□□ -1.92
DDX41Q9UJV9 MIR6715A-201ENST00000615929 79 ntBASIC3.04□□□□□ -1.92
DDX41Q9UJV9 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.04□□□□□ -1.92
DDX41Q9UJV9 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
DDX41Q9UJV9 ZNF271P-202ENST00000465539 1970 ntBASIC3.03□□□□□ -1.92
DDX41Q9UJV9 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
DDX41Q9UJV9 RNU1-58P-201ENST00000362413 163 ntBASIC3.03□□□□□ -1.92
DDX41Q9UJV9 RNU6-1164P-201ENST00000364428 107 ntBASIC3.03□□□□□ -1.92
DDX41Q9UJV9 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.03□□□□□ -1.92
DDX41Q9UJV9 SNORA72-201ENST00000384339 132 ntBASIC3.03□□□□□ -1.92
DDX41Q9UJV9 MIR626-201ENST00000385032 94 ntBASIC3.03□□□□□ -1.92
DDX41Q9UJV9 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.03□□□□□ -1.92
DDX41Q9UJV9 SNORA11.4-201ENST00000408823 129 ntBASIC3.03□□□□□ -1.92
DDX41Q9UJV9 CST2P1-201ENST00000425770 87 ntBASIC3.03□□□□□ -1.92
DDX41Q9UJV9 SNORA31.15-201ENST00000516771 132 ntBASIC3.03□□□□□ -1.92
DDX41Q9UJV9 MIR6817-201ENST00000615588 66 ntBASIC3.03□□□□□ -1.92
DDX41Q9UJV9 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.03□□□□□ -1.92
DDX41Q9UJV9 Y_RNA.121-201ENST00000363309 113 ntBASIC3.02□□□□□ -1.93
DDX41Q9UJV9 Y_RNA.150-201ENST00000363562 102 ntBASIC3.02□□□□□ -1.93
DDX41Q9UJV9 MIR520G-201ENST00000385064 90 ntBASIC3.02□□□□□ -1.93
DDX41Q9UJV9 RNA5SP181-201ENST00000410246 98 ntBASIC3.02□□□□□ -1.93
DDX41Q9UJV9 Y_RNA.662-201ENST00000516028 97 ntBASIC3.02□□□□□ -1.93
DDX41Q9UJV9 RN7SKP164-201ENST00000516138 266 ntBASIC3.02□□□□□ -1.93
DDX41Q9UJV9 AC024995.1-201ENST00000523014 93 ntBASIC3.02□□□□□ -1.93
DDX41Q9UJV9 MIR4308-201ENST00000580634 81 ntBASIC3.02□□□□□ -1.93
DDX41Q9UJV9 MIR5194-201ENST00000582634 120 ntBASIC3.02□□□□□ -1.93
DDX41Q9UJV9 AC022202.1-201ENST00000613515 211 ntBASIC3.02□□□□□ -1.93
DDX41Q9UJV9 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
DDX41Q9UJV9 Y_RNA.24-201ENST00000362508 103 ntBASIC3.01□□□□□ -1.93
DDX41Q9UJV9 RNU6-886P-201ENST00000384319 105 ntBASIC3.01□□□□□ -1.93
DDX41Q9UJV9 Y_RNA.571-201ENST00000384753 98 ntBASIC3.01□□□□□ -1.93
DDX41Q9UJV9 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.01□□□□□ -1.93
DDX41Q9UJV9 RNU6-861P-201ENST00000516745 106 ntBASIC3.01□□□□□ -1.93
DDX41Q9UJV9 RNA5SP402-201ENST00000517148 110 ntBASIC3.01□□□□□ -1.93
DDX41Q9UJV9 MIR3169-201ENST00000578032 83 ntBASIC3.01□□□□□ -1.93
DDX41Q9UJV9 MIR3605-201ENST00000583214 100 ntBASIC3.01□□□□□ -1.93
DDX41Q9UJV9 AC073413.2-201ENST00000604332 360 ntBASIC3.01□□□□□ -1.93
DDX41Q9UJV9 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.01□□□□□ -1.93
DDX41Q9UJV9 FO624990.1-201ENST00000636373 85 ntBASIC3.01□□□□□ -1.93
DDX41Q9UJV9 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.01□□□□□ -1.93
DDX41Q9UJV9 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3□□□□□ -1.93
DDX41Q9UJV9 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
DDX41Q9UJV9 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
DDX41Q9UJV9 RNU6-103P-201ENST00000363686 107 ntBASIC3□□□□□ -1.93
DDX41Q9UJV9 Y_RNA.180-201ENST00000363867 113 ntBASIC3□□□□□ -1.93
DDX41Q9UJV9 Y_RNA.238-201ENST00000364441 102 ntBASIC3□□□□□ -1.93
DDX41Q9UJV9 MIR562-201ENST00000384894 95 ntBASIC3□□□□□ -1.93
DDX41Q9UJV9 RNA5SP467-201ENST00000391274 118 ntBASIC3□□□□□ -1.93
DDX41Q9UJV9 RNA5SP508-201ENST00000411327 119 ntBASIC3□□□□□ -1.93
DDX41Q9UJV9 RNU6-437P-201ENST00000459408 95 ntBASIC3□□□□□ -1.93
DDX41Q9UJV9 RNU7-94P-201ENST00000459576 63 ntBASIC3□□□□□ -1.93
DDX41Q9UJV9 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3□□□□□ -1.93
DDX41Q9UJV9 RNA5SP148-201ENST00000516527 94 ntBASIC3□□□□□ -1.93
DDX41Q9UJV9 AC005786.1-201ENST00000588553 154 ntBASIC3□□□□□ -1.93
DDX41Q9UJV9 U6.106-201ENST00000636360 105 ntBASIC3□□□□□ -1.93
DDX41Q9UJV9 AC131280.1-202ENST00000624067 4211 ntBASIC3□□□□□ -1.93
DDX41Q9UJV9 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms