Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.29□□□□□ -2.46
VPS29Q9UBQ0 AC005730.3-201ENST00000583067 366 ntBASIC-0.29□□□□□ -2.46
VPS29Q9UBQ0 MIR4424-201ENST00000585257 86 ntBASIC-0.29□□□□□ -2.46
VPS29Q9UBQ0 MIR5692C1-201ENST00000585309 91 ntBASIC-0.29□□□□□ -2.46
VPS29Q9UBQ0 AC092747.3-201ENST00000603769 301 ntBASIC-0.29□□□□□ -2.46
VPS29Q9UBQ0 SNORA9.1-201ENST00000362412 131 ntBASIC-0.3□□□□□ -2.46
VPS29Q9UBQ0 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.3□□□□□ -2.46
VPS29Q9UBQ0 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.3□□□□□ -2.46
VPS29Q9UBQ0 RNU6-996P-201ENST00000365438 107 ntBASIC-0.3□□□□□ -2.46
VPS29Q9UBQ0 RNU6-214P-201ENST00000384130 107 ntBASIC-0.3□□□□□ -2.46
VPS29Q9UBQ0 RNU6-297P-201ENST00000384636 107 ntBASIC-0.3□□□□□ -2.46
VPS29Q9UBQ0 RNY3P9-201ENST00000384727 106 ntBASIC-0.3□□□□□ -2.46
VPS29Q9UBQ0 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-0.3□□□□□ -2.46
VPS29Q9UBQ0 MTATP6P18-201ENST00000417994 673 ntBASIC-0.3□□□□□ -2.46
VPS29Q9UBQ0 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.3□□□□□ -2.46
VPS29Q9UBQ0 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-0.3□□□□□ -2.46
VPS29Q9UBQ0 TPTE2P5-203ENST00000458118 728 ntBASIC-0.3□□□□□ -2.46
VPS29Q9UBQ0 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.3□□□□□ -2.46
VPS29Q9UBQ0 MTND1P8-201ENST00000571424 950 ntBASIC-0.3□□□□□ -2.46
VPS29Q9UBQ0 AL355375.2-201ENST00000574825 175 ntBASIC-0.3□□□□□ -2.46
VPS29Q9UBQ0 AL133215.3-201ENST00000609801 448 ntBASIC-0.3□□□□□ -2.46
VPS29Q9UBQ0 AL121757.2-201ENST00000611223 313 ntBASIC-0.3□□□□□ -2.46
VPS29Q9UBQ0 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.3□□□□□ -2.46
VPS29Q9UBQ0 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.3□□□□□ -2.46
VPS29Q9UBQ0 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.31□□□□□ -2.46
VPS29Q9UBQ0 RNU6-580P-201ENST00000365159 107 ntBASIC-0.31□□□□□ -2.46
VPS29Q9UBQ0 RNU6-514P-201ENST00000384208 107 ntBASIC-0.31□□□□□ -2.46
VPS29Q9UBQ0 RNU6-136P-201ENST00000384663 107 ntBASIC-0.31□□□□□ -2.46
VPS29Q9UBQ0 SNORD100-201ENST00000408573 76 ntBASIC-0.31□□□□□ -2.46
VPS29Q9UBQ0 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.31□□□□□ -2.46
VPS29Q9UBQ0 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.31□□□□□ -2.46
VPS29Q9UBQ0 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.31□□□□□ -2.46
VPS29Q9UBQ0 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.31□□□□□ -2.46
VPS29Q9UBQ0 AC141557.1-201ENST00000540982 400 ntBASIC-0.31□□□□□ -2.46
VPS29Q9UBQ0 AL158063.1-201ENST00000615349 536 ntBASIC-0.31□□□□□ -2.46
VPS29Q9UBQ0 RNU6-1214P-201ENST00000363650 109 ntBASIC-0.32□□□□□ -2.46
VPS29Q9UBQ0 RNU6-82P-201ENST00000363970 107 ntBASIC-0.32□□□□□ -2.46
VPS29Q9UBQ0 MIR610-201ENST00000385139 96 ntBASIC-0.32□□□□□ -2.46
VPS29Q9UBQ0 MIR644A-201ENST00000385262 94 ntBASIC-0.32□□□□□ -2.46
VPS29Q9UBQ0 MIR873-201ENST00000401120 77 ntBASIC-0.32□□□□□ -2.46
VPS29Q9UBQ0 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-0.32□□□□□ -2.46
VPS29Q9UBQ0 AL353572.1-201ENST00000442490 417 ntBASIC-0.32□□□□□ -2.46
VPS29Q9UBQ0 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-0.32□□□□□ -2.46
VPS29Q9UBQ0 SNORA19.2-201ENST00000516013 114 ntBASIC-0.32□□□□□ -2.46
VPS29Q9UBQ0 Y_RNA.683-201ENST00000516508 93 ntBASIC-0.32□□□□□ -2.46
VPS29Q9UBQ0 MIR4676-201ENST00000583078 72 ntBASIC-0.32□□□□□ -2.46
VPS29Q9UBQ0 SNORD45.3-201ENST00000363836 72 ntBASIC-0.33□□□□□ -2.46
VPS29Q9UBQ0 MT-TN-201ENST00000387400 73 ntBASIC-0.33□□□□□ -2.46
VPS29Q9UBQ0 RNU2-59P-201ENST00000410482 191 ntBASIC-0.33□□□□□ -2.46
VPS29Q9UBQ0 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.33□□□□□ -2.46
VPS29Q9UBQ0 RNU7-56P-201ENST00000458744 62 ntBASIC-0.33□□□□□ -2.46
VPS29Q9UBQ0 SNORD42A-201ENST00000459584 64 ntBASIC-0.33□□□□□ -2.46
VPS29Q9UBQ0 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.33□□□□□ -2.46
VPS29Q9UBQ0 RNA5SP330-201ENST00000517096 96 ntBASIC-0.33□□□□□ -2.46
VPS29Q9UBQ0 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.33□□□□□ -2.46
VPS29Q9UBQ0 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.33□□□□□ -2.46
VPS29Q9UBQ0 AC106754.1-201ENST00000562632 1513 ntBASIC-0.33□□□□□ -2.46
VPS29Q9UBQ0 RNU6-302P-201ENST00000365249 107 ntBASIC-0.34□□□□□ -2.46
VPS29Q9UBQ0 RNU6-716P-201ENST00000365621 103 ntBASIC-0.34□□□□□ -2.46
VPS29Q9UBQ0 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.34□□□□□ -2.46
VPS29Q9UBQ0 RNU6V-201ENST00000384105 107 ntBASIC-0.34□□□□□ -2.46
VPS29Q9UBQ0 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.34□□□□□ -2.46
VPS29Q9UBQ0 MIR145-201ENST00000384967 88 ntBASIC-0.34□□□□□ -2.46
VPS29Q9UBQ0 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.34□□□□□ -2.46
VPS29Q9UBQ0 RNU2-54P-201ENST00000410299 190 ntBASIC-0.34□□□□□ -2.46
VPS29Q9UBQ0 RNU6-248P-201ENST00000410720 107 ntBASIC-0.34□□□□□ -2.46
VPS29Q9UBQ0 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.34□□□□□ -2.46
VPS29Q9UBQ0 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-0.34□□□□□ -2.46
VPS29Q9UBQ0 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.34□□□□□ -2.46
VPS29Q9UBQ0 RPL30P10-201ENST00000488148 337 ntBASIC-0.34□□□□□ -2.46
VPS29Q9UBQ0 SNORD45.4-201ENST00000516629 73 ntBASIC-0.34□□□□□ -2.46
VPS29Q9UBQ0 AP002371.2-201ENST00000624450 503 ntBASIC-0.34□□□□□ -2.46
VPS29Q9UBQ0 MIR593-201ENST00000384856 100 ntBASIC-0.35□□□□□ -2.47
VPS29Q9UBQ0 SNORD28B-201ENST00000390993 75 ntBASIC-0.35□□□□□ -2.47
VPS29Q9UBQ0 PCNPP3-201ENST00000393579 471 ntBASIC-0.35□□□□□ -2.47
VPS29Q9UBQ0 AC073464.1-201ENST00000429823 534 ntBASIC-0.35□□□□□ -2.47
VPS29Q9UBQ0 HMGN2P32-201ENST00000444648 269 ntBASIC-0.35□□□□□ -2.47
VPS29Q9UBQ0 AC046134.1-201ENST00000514454 666 ntBASIC-0.35□□□□□ -2.47
VPS29Q9UBQ0 RNU6-1038P-201ENST00000516516 104 ntBASIC-0.35□□□□□ -2.47
VPS29Q9UBQ0 RNU6-63P-201ENST00000516690 95 ntBASIC-0.35□□□□□ -2.47
VPS29Q9UBQ0 AC100830.2-201ENST00000581636 240 ntBASIC-0.35□□□□□ -2.47
VPS29Q9UBQ0 AP000753.3-201ENST00000604083 169 ntBASIC-0.35□□□□□ -2.47
VPS29Q9UBQ0 MIR643-201ENST00000385267 97 ntBASIC-0.36□□□□□ -2.47
VPS29Q9UBQ0 RNU6-205P-201ENST00000390858 107 ntBASIC-0.36□□□□□ -2.47
VPS29Q9UBQ0 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.36□□□□□ -2.47
VPS29Q9UBQ0 RN7SKP287-201ENST00000516546 266 ntBASIC-0.36□□□□□ -2.47
VPS29Q9UBQ0 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.36□□□□□ -2.47
VPS29Q9UBQ0 AC134698.4-201ENST00000523451 826 ntBASIC-0.36□□□□□ -2.47
VPS29Q9UBQ0 MIR548AR-201ENST00000582191 57 ntBASIC-0.36□□□□□ -2.47
VPS29Q9UBQ0 AC020891.4-201ENST00000605745 93 ntBASIC-0.36□□□□□ -2.47
VPS29Q9UBQ0 MIR2909-201ENST00000617113 69 ntBASIC-0.36□□□□□ -2.47
VPS29Q9UBQ0 AC005609.4-201ENST00000625071 447 ntBASIC-0.36□□□□□ -2.47
VPS29Q9UBQ0 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.36□□□□□ -2.47
VPS29Q9UBQ0 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.37□□□□□ -2.47
VPS29Q9UBQ0 Y_RNA.159-201ENST00000363674 87 ntBASIC-0.37□□□□□ -2.47
VPS29Q9UBQ0 RNA5SP325-201ENST00000363756 130 ntBASIC-0.37□□□□□ -2.47
VPS29Q9UBQ0 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.37□□□□□ -2.47
VPS29Q9UBQ0 RNU6-929P-201ENST00000384429 107 ntBASIC-0.37□□□□□ -2.47
VPS29Q9UBQ0 RNU6-790P-201ENST00000384479 105 ntBASIC-0.37□□□□□ -2.47
VPS29Q9UBQ0 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms