Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 RNY1P16-201ENST00000363063 111 ntBASIC0.97□□□□□ -2.25
HOXC10Q9NYD6 Y_RNA.557-201ENST00000384680 107 ntBASIC0.97□□□□□ -2.25
HOXC10Q9NYD6 RNU6-700P-201ENST00000391043 107 ntBASIC0.97□□□□□ -2.25
HOXC10Q9NYD6 RNU5A-5P-201ENST00000411054 116 ntBASIC0.97□□□□□ -2.25
HOXC10Q9NYD6 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.97□□□□□ -2.25
HOXC10Q9NYD6 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.97□□□□□ -2.25
HOXC10Q9NYD6 RNA5SP480-201ENST00000516840 109 ntBASIC0.97□□□□□ -2.25
HOXC10Q9NYD6 Y_RNA.708-201ENST00000516950 96 ntBASIC0.97□□□□□ -2.25
HOXC10Q9NYD6 RNU7-172P-201ENST00000517125 64 ntBASIC0.97□□□□□ -2.25
HOXC10Q9NYD6 AC023157.2-201ENST00000540596 141 ntBASIC0.97□□□□□ -2.25
HOXC10Q9NYD6 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.97□□□□□ -2.25
HOXC10Q9NYD6 AC005899.2-201ENST00000584353 90 ntBASIC0.97□□□□□ -2.25
HOXC10Q9NYD6 AC060780.3-201ENST00000589464 80 ntBASIC0.97□□□□□ -2.25
HOXC10Q9NYD6 FAM71BP1-201ENST00000604431 523 ntBASIC0.97□□□□□ -2.25
HOXC10Q9NYD6 AL357075.2-201ENST00000614906 189 ntBASIC0.97□□□□□ -2.25
HOXC10Q9NYD6 SNORD3E-202ENST00000627253 216 ntBASIC0.97□□□□□ -2.25
HOXC10Q9NYD6 AC073869.6-201ENST00000640656 341 ntBASIC0.97□□□□□ -2.25
HOXC10Q9NYD6 RNU4-76P-201ENST00000364509 141 ntBASIC0.96□□□□□ -2.26
HOXC10Q9NYD6 RNU6-117P-201ENST00000365415 107 ntBASIC0.96□□□□□ -2.26
HOXC10Q9NYD6 RNU6-424P-201ENST00000384367 105 ntBASIC0.96□□□□□ -2.26
HOXC10Q9NYD6 AL137792.2-201ENST00000443484 235 ntBASIC0.96□□□□□ -2.26
HOXC10Q9NYD6 UQCRBP2-201ENST00000447827 297 ntBASIC0.96□□□□□ -2.26
HOXC10Q9NYD6 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.96□□□□□ -2.26
HOXC10Q9NYD6 AC092989.1-201ENST00000481235 277 ntBASIC0.96□□□□□ -2.26
HOXC10Q9NYD6 OR9P1P-201ENST00000496431 281 ntBASIC0.96□□□□□ -2.26
HOXC10Q9NYD6 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.96□□□□□ -2.26
HOXC10Q9NYD6 MIR2355-201ENST00000517199 87 ntBASIC0.96□□□□□ -2.26
HOXC10Q9NYD6 AC090049.2-201ENST00000550377 109 ntBASIC0.96□□□□□ -2.26
HOXC10Q9NYD6 AC018448.1-201ENST00000552843 316 ntBASIC0.96□□□□□ -2.26
HOXC10Q9NYD6 GHRLOS.1-201ENST00000610995 70 ntBASIC0.96□□□□□ -2.26
HOXC10Q9NYD6 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.96□□□□□ -2.26
HOXC10Q9NYD6 AC073544.1-201ENST00000600110 1595 ntBASIC0.96□□□□□ -2.26
HOXC10Q9NYD6 RNU6-199P-201ENST00000362954 107 ntBASIC0.95□□□□□ -2.26
HOXC10Q9NYD6 Y_RNA.243-201ENST00000364481 109 ntBASIC0.95□□□□□ -2.26
HOXC10Q9NYD6 RNU6-318P-201ENST00000384283 103 ntBASIC0.95□□□□□ -2.26
HOXC10Q9NYD6 MIR873-201ENST00000401120 77 ntBASIC0.95□□□□□ -2.26
HOXC10Q9NYD6 MIR548F5-201ENST00000408421 86 ntBASIC0.95□□□□□ -2.26
HOXC10Q9NYD6 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.95□□□□□ -2.26
HOXC10Q9NYD6 RNA5SP20-201ENST00000515976 84 ntBASIC0.95□□□□□ -2.26
HOXC10Q9NYD6 RNU6-107P-201ENST00000516643 102 ntBASIC0.95□□□□□ -2.26
HOXC10Q9NYD6 AP002004.2-201ENST00000531656 154 ntBASIC0.95□□□□□ -2.26
HOXC10Q9NYD6 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.95□□□□□ -2.26
HOXC10Q9NYD6 RPL21P9-201ENST00000556149 474 ntBASIC0.95□□□□□ -2.26
HOXC10Q9NYD6 AC108706.1-201ENST00000611053 297 ntBASIC0.95□□□□□ -2.26
HOXC10Q9NYD6 U6.115-201ENST00000636045 103 ntBASIC0.95□□□□□ -2.26
HOXC10Q9NYD6 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
HOXC10Q9NYD6 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
HOXC10Q9NYD6 RNU1-133P-201ENST00000364867 167 ntBASIC0.94□□□□□ -2.26
HOXC10Q9NYD6 MIR19B1-201ENST00000384829 87 ntBASIC0.94□□□□□ -2.26
HOXC10Q9NYD6 MIR7-2-201ENST00000384970 110 ntBASIC0.94□□□□□ -2.26
HOXC10Q9NYD6 RNA5SP482-201ENST00000391269 118 ntBASIC0.94□□□□□ -2.26
HOXC10Q9NYD6 RPS3AP52-201ENST00000435639 297 ntBASIC0.94□□□□□ -2.26
HOXC10Q9NYD6 AC107399.1-201ENST00000451226 265 ntBASIC0.94□□□□□ -2.26
HOXC10Q9NYD6 RNU6-718P-201ENST00000516166 105 ntBASIC0.94□□□□□ -2.26
HOXC10Q9NYD6 RNA5SP168-201ENST00000516642 112 ntBASIC0.94□□□□□ -2.26
HOXC10Q9NYD6 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.94□□□□□ -2.26
HOXC10Q9NYD6 AP002001.1-203ENST00000534002 267 ntBASIC0.94□□□□□ -2.26
HOXC10Q9NYD6 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.94□□□□□ -2.26
HOXC10Q9NYD6 MIR4653-201ENST00000585107 83 ntBASIC0.94□□□□□ -2.26
HOXC10Q9NYD6 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.93□□□□□ -2.26
HOXC10Q9NYD6 MIRLET7C-201ENST00000362160 84 ntBASIC0.93□□□□□ -2.26
HOXC10Q9NYD6 Y_RNA.88-201ENST00000363029 99 ntBASIC0.93□□□□□ -2.26
HOXC10Q9NYD6 Y_RNA.166-201ENST00000363730 102 ntBASIC0.93□□□□□ -2.26
HOXC10Q9NYD6 RNU6-454P-201ENST00000364292 107 ntBASIC0.93□□□□□ -2.26
HOXC10Q9NYD6 SNORA2.2-201ENST00000365473 135 ntBASIC0.93□□□□□ -2.26
HOXC10Q9NYD6 Y_RNA.358-201ENST00000365491 99 ntBASIC0.93□□□□□ -2.26
HOXC10Q9NYD6 RNU6-601P-201ENST00000384540 107 ntBASIC0.93□□□□□ -2.26
HOXC10Q9NYD6 SNORD41-201ENST00000386967 70 ntBASIC0.93□□□□□ -2.26
HOXC10Q9NYD6 SNORD12-201ENST00000391002 90 ntBASIC0.93□□□□□ -2.26
HOXC10Q9NYD6 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.93□□□□□ -2.26
HOXC10Q9NYD6 AC018865.2-201ENST00000423631 129 ntBASIC0.93□□□□□ -2.26
HOXC10Q9NYD6 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.93□□□□□ -2.26
HOXC10Q9NYD6 STAG3L5P-204ENST00000443759 179 ntBASIC0.93□□□□□ -2.26
HOXC10Q9NYD6 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.93□□□□□ -2.26
HOXC10Q9NYD6 AC069439.1-201ENST00000494739 167 ntBASIC0.93□□□□□ -2.26
HOXC10Q9NYD6 AC018710.1-201ENST00000506509 158 ntBASIC0.93□□□□□ -2.26
HOXC10Q9NYD6 RNU6-351P-201ENST00000516097 100 ntBASIC0.93□□□□□ -2.26
HOXC10Q9NYD6 RNU6-307P-201ENST00000516743 106 ntBASIC0.93□□□□□ -2.26
HOXC10Q9NYD6 SNORA70.22-201ENST00000517160 124 ntBASIC0.93□□□□□ -2.26
HOXC10Q9NYD6 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.93□□□□□ -2.26
HOXC10Q9NYD6 AC009229.3-201ENST00000608056 282 ntBASIC0.93□□□□□ -2.26
HOXC10Q9NYD6 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.93□□□□□ -2.26
HOXC10Q9NYD6 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.93□□□□□ -2.26
HOXC10Q9NYD6 MIR3674-201ENST00000636576 68 ntBASIC0.93□□□□□ -2.26
HOXC10Q9NYD6 AC068647.2-201ENST00000637380 353 ntBASIC0.93□□□□□ -2.26
HOXC10Q9NYD6 Y_RNA.2-201ENST00000362330 96 ntBASIC0.92□□□□□ -2.26
HOXC10Q9NYD6 Y_RNA.36-201ENST00000362602 112 ntBASIC0.92□□□□□ -2.26
HOXC10Q9NYD6 RNA5SP361-201ENST00000362686 118 ntBASIC0.92□□□□□ -2.26
HOXC10Q9NYD6 RNU6-1310P-201ENST00000384153 107 ntBASIC0.92□□□□□ -2.26
HOXC10Q9NYD6 Y_RNA.498-201ENST00000384460 102 ntBASIC0.92□□□□□ -2.26
HOXC10Q9NYD6 RNU6-1105P-201ENST00000384774 107 ntBASIC0.92□□□□□ -2.26
HOXC10Q9NYD6 MIR520G-201ENST00000385064 90 ntBASIC0.92□□□□□ -2.26
HOXC10Q9NYD6 FCF1P9-201ENST00000412546 282 ntBASIC0.92□□□□□ -2.26
HOXC10Q9NYD6 U8.22-201ENST00000459141 133 ntBASIC0.92□□□□□ -2.26
HOXC10Q9NYD6 AC091021.1-201ENST00000468051 388 ntBASIC0.92□□□□□ -2.26
HOXC10Q9NYD6 RPL17P19-201ENST00000489069 552 ntBASIC0.92□□□□□ -2.26
HOXC10Q9NYD6 Y_RNA.691-201ENST00000516611 103 ntBASIC0.92□□□□□ -2.26
HOXC10Q9NYD6 AL020996.3-201ENST00000606617 222 ntBASIC0.92□□□□□ -2.26
HOXC10Q9NYD6 MIR6835-201ENST00000621552 64 ntBASIC0.92□□□□□ -2.26
HOXC10Q9NYD6 SNORA1B-201ENST00000362535 133 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms