Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 AC080100.1-201ENST00000624239 5356 ntBASIC2.4□□□□□ -2.03
MKS1Q9NXB0 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
MKS1Q9NXB0 AC018630.2-201ENST00000534866 2403 ntBASIC2.39□□□□□ -2.03
MKS1Q9NXB0 RNU4-13P-201ENST00000364019 141 ntBASIC2.39□□□□□ -2.03
MKS1Q9NXB0 RNU6-1323P-201ENST00000384025 107 ntBASIC2.39□□□□□ -2.03
MKS1Q9NXB0 Y_RNA.590-201ENST00000410140 107 ntBASIC2.39□□□□□ -2.03
MKS1Q9NXB0 AL356379.1-201ENST00000414105 126 ntBASIC2.39□□□□□ -2.03
MKS1Q9NXB0 AC104332.1-201ENST00000440471 797 ntBASIC2.39□□□□□ -2.03
MKS1Q9NXB0 U8.19-201ENST00000459095 133 ntBASIC2.39□□□□□ -2.03
MKS1Q9NXB0 TRBV12-1-201ENST00000479785 344 ntBASIC2.39□□□□□ -2.03
MKS1Q9NXB0 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.39□□□□□ -2.03
MKS1Q9NXB0 RNA5SP320-201ENST00000516263 124 ntBASIC2.39□□□□□ -2.03
MKS1Q9NXB0 RNU6-111P-201ENST00000517179 105 ntBASIC2.39□□□□□ -2.03
MKS1Q9NXB0 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.39□□□□□ -2.03
MKS1Q9NXB0 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.39□□□□□ -2.03
MKS1Q9NXB0 AL137790.1-201ENST00000634283 177 ntBASIC2.39□□□□□ -2.03
MKS1Q9NXB0 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
MKS1Q9NXB0 Y_RNA.65-201ENST00000362846 100 ntBASIC2.38□□□□□ -2.03
MKS1Q9NXB0 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
MKS1Q9NXB0 RNU6-338P-201ENST00000383888 105 ntBASIC2.38□□□□□ -2.03
MKS1Q9NXB0 COTL1P1-201ENST00000422309 375 ntBASIC2.38□□□□□ -2.03
MKS1Q9NXB0 SNORD2.1-201ENST00000458762 69 ntBASIC2.38□□□□□ -2.03
MKS1Q9NXB0 RNU7-141P-201ENST00000459304 62 ntBASIC2.38□□□□□ -2.03
MKS1Q9NXB0 AC091021.1-201ENST00000468051 388 ntBASIC2.38□□□□□ -2.03
MKS1Q9NXB0 RNU7-115P-201ENST00000516433 55 ntBASIC2.38□□□□□ -2.03
MKS1Q9NXB0 MIR3671-201ENST00000580455 88 ntBASIC2.38□□□□□ -2.03
MKS1Q9NXB0 AC091178.2-201ENST00000584401 117 ntBASIC2.38□□□□□ -2.03
MKS1Q9NXB0 AL008718.3-201ENST00000610217 321 ntBASIC2.38□□□□□ -2.03
MKS1Q9NXB0 MIR1291-201ENST00000627649 87 ntBASIC2.38□□□□□ -2.03
MKS1Q9NXB0 MIR6079-201ENST00000635807 62 ntBASIC2.38□□□□□ -2.03
MKS1Q9NXB0 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
MKS1Q9NXB0 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.37□□□□□ -2.03
MKS1Q9NXB0 AC008555.8-201ENST00000623602 2168 ntBASIC2.37□□□□□ -2.03
MKS1Q9NXB0 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
MKS1Q9NXB0 AC134026.1-201ENST00000623249 2239 ntBASIC2.37□□□□□ -2.03
MKS1Q9NXB0 Y_RNA.76-201ENST00000362931 109 ntBASIC2.37□□□□□ -2.03
MKS1Q9NXB0 RNU6-899P-201ENST00000363947 107 ntBASIC2.37□□□□□ -2.03
MKS1Q9NXB0 SNORA16B-201ENST00000364674 135 ntBASIC2.37□□□□□ -2.03
MKS1Q9NXB0 U8.7-201ENST00000364940 136 ntBASIC2.37□□□□□ -2.03
MKS1Q9NXB0 MIR520G-201ENST00000385064 90 ntBASIC2.37□□□□□ -2.03
MKS1Q9NXB0 MTCO2P33-201ENST00000402100 465 ntBASIC2.37□□□□□ -2.03
MKS1Q9NXB0 AL359511.1-201ENST00000402970 211 ntBASIC2.37□□□□□ -2.03
MKS1Q9NXB0 NDUFB4P4-201ENST00000404822 243 ntBASIC2.37□□□□□ -2.03
MKS1Q9NXB0 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.37□□□□□ -2.03
MKS1Q9NXB0 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.37□□□□□ -2.03
MKS1Q9NXB0 AC069257.2-201ENST00000441819 155 ntBASIC2.37□□□□□ -2.03
MKS1Q9NXB0 RPS4XP11-201ENST00000446897 772 ntBASIC2.37□□□□□ -2.03
MKS1Q9NXB0 RNU7-94P-201ENST00000459576 63 ntBASIC2.37□□□□□ -2.03
MKS1Q9NXB0 AC117454.1-201ENST00000491120 168 ntBASIC2.37□□□□□ -2.03
MKS1Q9NXB0 AC090255.1-201ENST00000495779 349 ntBASIC2.37□□□□□ -2.03
MKS1Q9NXB0 Y_RNA.679-201ENST00000516416 91 ntBASIC2.37□□□□□ -2.03
MKS1Q9NXB0 RNU7-116P-201ENST00000516940 62 ntBASIC2.37□□□□□ -2.03
MKS1Q9NXB0 AC005357.1-201ENST00000588399 301 ntBASIC2.37□□□□□ -2.03
MKS1Q9NXB0 POLR3GP1-201ENST00000594073 261 ntBASIC2.37□□□□□ -2.03
MKS1Q9NXB0 AP003357.1-201ENST00000604497 148 ntBASIC2.37□□□□□ -2.03
MKS1Q9NXB0 AC013791.1-201ENST00000616619 62 ntBASIC2.37□□□□□ -2.03
MKS1Q9NXB0 MIR548AY-201ENST00000617669 107 ntBASIC2.37□□□□□ -2.03
MKS1Q9NXB0 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
MKS1Q9NXB0 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
MKS1Q9NXB0 SNORD114-30-201ENST00000364448 72 ntBASIC2.36□□□□□ -2.03
MKS1Q9NXB0 Y_RNA.269-201ENST00000364685 89 ntBASIC2.36□□□□□ -2.03
MKS1Q9NXB0 RNU6-211P-201ENST00000384047 107 ntBASIC2.36□□□□□ -2.03
MKS1Q9NXB0 RNU6-388P-201ENST00000517012 105 ntBASIC2.36□□□□□ -2.03
MKS1Q9NXB0 RNU6-389P-201ENST00000517048 105 ntBASIC2.36□□□□□ -2.03
MKS1Q9NXB0 RNU6-1096P-201ENST00000517089 102 ntBASIC2.36□□□□□ -2.03
MKS1Q9NXB0 AC024405.2-202ENST00000532731 184 ntBASIC2.36□□□□□ -2.03
MKS1Q9NXB0 EIF4BP1-201ENST00000554881 351 ntBASIC2.36□□□□□ -2.03
MKS1Q9NXB0 AC103810.6-201ENST00000606708 136 ntBASIC2.36□□□□□ -2.03
MKS1Q9NXB0 MIR7106-201ENST00000612419 65 ntBASIC2.36□□□□□ -2.03
MKS1Q9NXB0 AC006386.2-201ENST00000624491 75 ntBASIC2.36□□□□□ -2.03
MKS1Q9NXB0 AC012005.1-201ENST00000624575 75 ntBASIC2.36□□□□□ -2.03
MKS1Q9NXB0 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.36□□□□□ -2.03
MKS1Q9NXB0 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.36□□□□□ -2.03
MKS1Q9NXB0 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
MKS1Q9NXB0 AC005336.3-201ENST00000623833 2679 ntBASIC2.35□□□□□ -2.03
MKS1Q9NXB0 ZNF720P1-201ENST00000562403 1939 ntBASIC2.35□□□□□ -2.03
MKS1Q9NXB0 RNU6-112P-201ENST00000363599 104 ntBASIC2.35□□□□□ -2.03
MKS1Q9NXB0 SNORA72-201ENST00000384339 132 ntBASIC2.35□□□□□ -2.03
MKS1Q9NXB0 AL513328.1-201ENST00000446460 224 ntBASIC2.35□□□□□ -2.03
MKS1Q9NXB0 SNORD109B-201ENST00000458961 67 ntBASIC2.35□□□□□ -2.03
MKS1Q9NXB0 SNORD109A-201ENST00000459128 67 ntBASIC2.35□□□□□ -2.03
MKS1Q9NXB0 Y_RNA.638-201ENST00000459374 113 ntBASIC2.35□□□□□ -2.03
MKS1Q9NXB0 RN7SKP132-201ENST00000516001 208 ntBASIC2.35□□□□□ -2.03
MKS1Q9NXB0 RNU4-71P-201ENST00000516258 113 ntBASIC2.35□□□□□ -2.03
MKS1Q9NXB0 RNU6-341P-201ENST00000516973 96 ntBASIC2.35□□□□□ -2.03
MKS1Q9NXB0 MIR5692C2-201ENST00000577959 77 ntBASIC2.35□□□□□ -2.03
MKS1Q9NXB0 ELOCP29-201ENST00000588193 334 ntBASIC2.35□□□□□ -2.03
MKS1Q9NXB0 AC022217.4-201ENST00000604389 163 ntBASIC2.35□□□□□ -2.03
MKS1Q9NXB0 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.35□□□□□ -2.03
MKS1Q9NXB0 AL442067.1-201ENST00000613261 223 ntBASIC2.35□□□□□ -2.03
MKS1Q9NXB0 AC073349.3-201ENST00000617616 186 ntBASIC2.35□□□□□ -2.03
MKS1Q9NXB0 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
MKS1Q9NXB0 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
MKS1Q9NXB0 ZNF702P-202ENST00000434269 1966 ntBASIC2.34□□□□□ -2.03
MKS1Q9NXB0 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.03
MKS1Q9NXB0 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
MKS1Q9NXB0 SNORA63D-201ENST00000364359 132 ntBASIC2.34□□□□□ -2.03
MKS1Q9NXB0 MIR562-201ENST00000384894 95 ntBASIC2.34□□□□□ -2.03
MKS1Q9NXB0 RNA5SP109-201ENST00000391010 116 ntBASIC2.34□□□□□ -2.03
MKS1Q9NXB0 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms