Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
ATG3Q9NT62 MIR548A1-201ENST00000385041 97 ntBASIC3.51□□□□□ -1.85
ATG3Q9NT62 AL355796.1-201ENST00000406706 323 ntBASIC3.51□□□□□ -1.85
ATG3Q9NT62 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.51□□□□□ -1.85
ATG3Q9NT62 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.51□□□□□ -1.85
ATG3Q9NT62 RPS26P45-201ENST00000471748 340 ntBASIC3.51□□□□□ -1.85
ATG3Q9NT62 SNORA70.12-201ENST00000516084 153 ntBASIC3.51□□□□□ -1.85
ATG3Q9NT62 RNU6-1337P-201ENST00000516525 95 ntBASIC3.51□□□□□ -1.85
ATG3Q9NT62 AC109329.2-201ENST00000519658 482 ntBASIC3.51□□□□□ -1.85
ATG3Q9NT62 AC007536.1-201ENST00000533382 349 ntBASIC3.51□□□□□ -1.85
ATG3Q9NT62 AC091152.3-201ENST00000604227 325 ntBASIC3.51□□□□□ -1.85
ATG3Q9NT62 uc_338.28-201ENST00000612082 187 ntBASIC3.51□□□□□ -1.85
ATG3Q9NT62 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ATG3Q9NT62 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.51□□□□□ -1.85
ATG3Q9NT62 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.51□□□□□ -1.85
ATG3Q9NT62 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ATG3Q9NT62 AC009487.2-201ENST00000420969 6821 ntBASIC3.5□□□□□ -1.85
ATG3Q9NT62 RNU6-309P-201ENST00000364573 106 ntBASIC3.5□□□□□ -1.85
ATG3Q9NT62 RNU6-32P-201ENST00000383948 107 ntBASIC3.5□□□□□ -1.85
ATG3Q9NT62 RNU6-484P-201ENST00000384016 107 ntBASIC3.5□□□□□ -1.85
ATG3Q9NT62 SNORA70B-201ENST00000384210 135 ntBASIC3.5□□□□□ -1.85
ATG3Q9NT62 RNU6-13P-201ENST00000384248 107 ntBASIC3.5□□□□□ -1.85
ATG3Q9NT62 RNU6-12P-201ENST00000384604 107 ntBASIC3.5□□□□□ -1.85
ATG3Q9NT62 RNU6-41P-201ENST00000384741 107 ntBASIC3.5□□□□□ -1.85
ATG3Q9NT62 MRPS36P2-201ENST00000512569 299 ntBASIC3.5□□□□□ -1.85
ATG3Q9NT62 AC096725.1-201ENST00000514266 313 ntBASIC3.5□□□□□ -1.85
ATG3Q9NT62 RNU6-197P-201ENST00000516680 100 ntBASIC3.5□□□□□ -1.85
ATG3Q9NT62 RPS15AP11-201ENST00000594193 385 ntBASIC3.5□□□□□ -1.85
ATG3Q9NT62 AP003357.1-201ENST00000604497 148 ntBASIC3.5□□□□□ -1.85
ATG3Q9NT62 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ATG3Q9NT62 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
ATG3Q9NT62 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.49□□□□□ -1.85
ATG3Q9NT62 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.49□□□□□ -1.85
ATG3Q9NT62 Y_RNA.116-201ENST00000363292 103 ntBASIC3.49□□□□□ -1.85
ATG3Q9NT62 SNORD73B-201ENST00000364394 72 ntBASIC3.49□□□□□ -1.85
ATG3Q9NT62 SNORA51.4-201ENST00000364993 124 ntBASIC3.49□□□□□ -1.85
ATG3Q9NT62 SNORD21-201ENST00000383953 95 ntBASIC3.49□□□□□ -1.85
ATG3Q9NT62 MIR518C-201ENST00000384822 101 ntBASIC3.49□□□□□ -1.85
ATG3Q9NT62 MIRLET7F2-201ENST00000385277 83 ntBASIC3.49□□□□□ -1.85
ATG3Q9NT62 RPL23AP7-203ENST00000449021 469 ntBASIC3.49□□□□□ -1.85
ATG3Q9NT62 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.49□□□□□ -1.85
ATG3Q9NT62 snoU13.14-201ENST00000459372 104 ntBASIC3.49□□□□□ -1.85
ATG3Q9NT62 RN7SL499P-201ENST00000481141 276 ntBASIC3.49□□□□□ -1.85
ATG3Q9NT62 SNORD19.2-201ENST00000516978 73 ntBASIC3.49□□□□□ -1.85
ATG3Q9NT62 SNORD53-201ENST00000579969 78 ntBASIC3.49□□□□□ -1.85
ATG3Q9NT62 ZNF861P-201ENST00000588126 639 ntBASIC3.49□□□□□ -1.85
ATG3Q9NT62 AL121890.5-201ENST00000620848 304 ntBASIC3.49□□□□□ -1.85
ATG3Q9NT62 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.49□□□□□ -1.85
ATG3Q9NT62 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
ATG3Q9NT62 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
ATG3Q9NT62 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ATG3Q9NT62 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
ATG3Q9NT62 SNORA12-201ENST00000391162 147 ntBASIC3.48□□□□□ -1.85
ATG3Q9NT62 SNORA26.7-201ENST00000391288 122 ntBASIC3.48□□□□□ -1.85
ATG3Q9NT62 U6atac.2-201ENST00000408644 118 ntBASIC3.48□□□□□ -1.85
ATG3Q9NT62 MIR1302-4-201ENST00000408701 150 ntBASIC3.48□□□□□ -1.85
ATG3Q9NT62 RN7SKP101-201ENST00000411376 320 ntBASIC3.48□□□□□ -1.85
ATG3Q9NT62 AL031737.1-201ENST00000450125 223 ntBASIC3.48□□□□□ -1.85
ATG3Q9NT62 AC090515.1-201ENST00000465295 476 ntBASIC3.48□□□□□ -1.85
ATG3Q9NT62 AC003982.1-202ENST00000469928 248 ntBASIC3.48□□□□□ -1.85
ATG3Q9NT62 Y_RNA.677-201ENST00000516401 85 ntBASIC3.48□□□□□ -1.85
ATG3Q9NT62 POLR3GP1-201ENST00000594073 261 ntBASIC3.48□□□□□ -1.85
ATG3Q9NT62 AL021707.8-201ENST00000609428 183 ntBASIC3.48□□□□□ -1.85
ATG3Q9NT62 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
ATG3Q9NT62 AC093908.1-201ENST00000623125 8092 ntBASIC3.47□□□□□ -1.85
ATG3Q9NT62 RNU6-1323P-201ENST00000384025 107 ntBASIC3.47□□□□□ -1.85
ATG3Q9NT62 RPS29P6-201ENST00000438196 145 ntBASIC3.47□□□□□ -1.85
ATG3Q9NT62 RPS29P24-201ENST00000486345 171 ntBASIC3.47□□□□□ -1.85
ATG3Q9NT62 RNA5SP24-201ENST00000516478 95 ntBASIC3.47□□□□□ -1.85
ATG3Q9NT62 Y_RNA.690-201ENST00000516603 95 ntBASIC3.47□□□□□ -1.85
ATG3Q9NT62 AL591926.4-201ENST00000616895 298 ntBASIC3.47□□□□□ -1.85
ATG3Q9NT62 AC064859.1-201ENST00000624741 174 ntBASIC3.47□□□□□ -1.85
ATG3Q9NT62 MIR6733-201ENST00000635723 61 ntBASIC3.47□□□□□ -1.85
ATG3Q9NT62 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
ATG3Q9NT62 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.47□□□□□ -1.85
ATG3Q9NT62 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
ATG3Q9NT62 RNU6-1010P-201ENST00000362757 107 ntBASIC3.46□□□□□ -1.86
ATG3Q9NT62 RNU6-1305P-201ENST00000364353 104 ntBASIC3.46□□□□□ -1.86
ATG3Q9NT62 U8.9-201ENST00000365667 134 ntBASIC3.46□□□□□ -1.86
ATG3Q9NT62 RNU6-106P-201ENST00000384405 107 ntBASIC3.46□□□□□ -1.86
ATG3Q9NT62 RNU6-880P-201ENST00000384526 107 ntBASIC3.46□□□□□ -1.86
ATG3Q9NT62 MIR181B1-201ENST00000385240 110 ntBASIC3.46□□□□□ -1.86
ATG3Q9NT62 AL603914.1-201ENST00000401964 204 ntBASIC3.46□□□□□ -1.86
ATG3Q9NT62 SNORA3.2-201ENST00000408221 125 ntBASIC3.46□□□□□ -1.86
ATG3Q9NT62 SNORA79-201ENST00000408376 140 ntBASIC3.46□□□□□ -1.86
ATG3Q9NT62 MIR1185-2-201ENST00000408687 86 ntBASIC3.46□□□□□ -1.86
ATG3Q9NT62 AL135786.1-201ENST00000415892 214 ntBASIC3.46□□□□□ -1.86
ATG3Q9NT62 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.46□□□□□ -1.86
ATG3Q9NT62 Y_RNA.649-201ENST00000459077 103 ntBASIC3.46□□□□□ -1.86
ATG3Q9NT62 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.46□□□□□ -1.86
ATG3Q9NT62 RN7SKP19-201ENST00000516016 252 ntBASIC3.46□□□□□ -1.86
ATG3Q9NT62 RNU6-537P-201ENST00000517277 103 ntBASIC3.46□□□□□ -1.86
ATG3Q9NT62 HSPE1P18-201ENST00000517602 280 ntBASIC3.46□□□□□ -1.86
ATG3Q9NT62 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.46□□□□□ -1.86
ATG3Q9NT62 AC091178.2-201ENST00000584401 117 ntBASIC3.46□□□□□ -1.86
ATG3Q9NT62 AC131055.1-201ENST00000584626 316 ntBASIC3.46□□□□□ -1.86
ATG3Q9NT62 AL049861.1-201ENST00000603130 150 ntBASIC3.46□□□□□ -1.86
ATG3Q9NT62 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
ATG3Q9NT62 MIR26A1-201ENST00000362205 77 ntBASIC3.45□□□□□ -1.86
ATG3Q9NT62 Y_RNA.432-201ENST00000384087 111 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms