Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RTN4Q9NQC3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC4.35□□□□□ -1.71
RTN4Q9NQC3 AC008555.8-201ENST00000623602 2168 ntBASIC4.35□□□□□ -1.71
RTN4Q9NQC3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
RTN4Q9NQC3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC4.34□□□□□ -1.71
RTN4Q9NQC3 RNA5SP509-201ENST00000364577 119 ntBASIC4.34□□□□□ -1.71
RTN4Q9NQC3 RNU6-1189P-201ENST00000383958 107 ntBASIC4.34□□□□□ -1.71
RTN4Q9NQC3 RNU6-296P-201ENST00000384608 107 ntBASIC4.34□□□□□ -1.71
RTN4Q9NQC3 RNA5SP293-201ENST00000410527 113 ntBASIC4.34□□□□□ -1.71
RTN4Q9NQC3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC4.34□□□□□ -1.71
RTN4Q9NQC3 RN7SL20P-201ENST00000488827 297 ntBASIC4.34□□□□□ -1.71
RTN4Q9NQC3 RN7SKP21-201ENST00000516503 220 ntBASIC4.34□□□□□ -1.71
RTN4Q9NQC3 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.34□□□□□ -1.71
RTN4Q9NQC3 MIR7641-1-201ENST00000627518 61 ntBASIC4.34□□□□□ -1.71
RTN4Q9NQC3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
RTN4Q9NQC3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RTN4Q9NQC3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
RTN4Q9NQC3 RNA5SP399-201ENST00000364003 117 ntBASIC4.33□□□□□ -1.72
RTN4Q9NQC3 SNORA56-201ENST00000383966 129 ntBASIC4.33□□□□□ -1.72
RTN4Q9NQC3 MIR548A2-201ENST00000384956 97 ntBASIC4.33□□□□□ -1.72
RTN4Q9NQC3 AC091167.1-201ENST00000492017 396 ntBASIC4.33□□□□□ -1.72
RTN4Q9NQC3 RNU2-19P-201ENST00000517288 84 ntBASIC4.33□□□□□ -1.72
RTN4Q9NQC3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC4.33□□□□□ -1.72
RTN4Q9NQC3 MIR4284-201ENST00000578924 81 ntBASIC4.33□□□□□ -1.72
RTN4Q9NQC3 AL359881.1-201ENST00000602916 267 ntBASIC4.33□□□□□ -1.72
RTN4Q9NQC3 AC114781.5-201ENST00000615297 108 ntBASIC4.33□□□□□ -1.72
RTN4Q9NQC3 MIR3653-201ENST00000625572 110 ntBASIC4.33□□□□□ -1.72
RTN4Q9NQC3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.33□□□□□ -1.72
RTN4Q9NQC3 MIRLET7C-201ENST00000362160 84 ntBASIC4.32□□□□□ -1.72
RTN4Q9NQC3 RNU6-525P-201ENST00000363685 104 ntBASIC4.32□□□□□ -1.72
RTN4Q9NQC3 MIR452-201ENST00000385020 85 ntBASIC4.32□□□□□ -1.72
RTN4Q9NQC3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC4.32□□□□□ -1.72
RTN4Q9NQC3 AC091153.1-201ENST00000466297 402 ntBASIC4.32□□□□□ -1.72
RTN4Q9NQC3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
RTN4Q9NQC3 RNU6-1333P-201ENST00000516162 93 ntBASIC4.32□□□□□ -1.72
RTN4Q9NQC3 RNA5SP168-201ENST00000516642 112 ntBASIC4.32□□□□□ -1.72
RTN4Q9NQC3 RNU6-113P-201ENST00000516653 101 ntBASIC4.32□□□□□ -1.72
RTN4Q9NQC3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC4.32□□□□□ -1.72
RTN4Q9NQC3 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RTN4Q9NQC3 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC4.32□□□□□ -1.72
RTN4Q9NQC3 MIR6868-201ENST00000611215 58 ntBASIC4.32□□□□□ -1.72
RTN4Q9NQC3 AL365222.1-201ENST00000614661 98 ntBASIC4.32□□□□□ -1.72
RTN4Q9NQC3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC4.32□□□□□ -1.72
RTN4Q9NQC3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RTN4Q9NQC3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RTN4Q9NQC3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RTN4Q9NQC3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RTN4Q9NQC3 MIR383-201ENST00000362257 73 ntBASIC4.31□□□□□ -1.72
RTN4Q9NQC3 RNU6-647P-201ENST00000364243 107 ntBASIC4.31□□□□□ -1.72
RTN4Q9NQC3 AL445646.1-201ENST00000431784 216 ntBASIC4.31□□□□□ -1.72
RTN4Q9NQC3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.31□□□□□ -1.72
RTN4Q9NQC3 AC105272.1-201ENST00000438604 198 ntBASIC4.31□□□□□ -1.72
RTN4Q9NQC3 RN7SL860P-201ENST00000473738 223 ntBASIC4.31□□□□□ -1.72
RTN4Q9NQC3 RNU7-12P-201ENST00000516030 62 ntBASIC4.31□□□□□ -1.72
RTN4Q9NQC3 RNU6-830P-201ENST00000516353 107 ntBASIC4.31□□□□□ -1.72
RTN4Q9NQC3 CYCSP29-201ENST00000533731 318 ntBASIC4.31□□□□□ -1.72
RTN4Q9NQC3 RN7SL600P-201ENST00000581811 299 ntBASIC4.31□□□□□ -1.72
RTN4Q9NQC3 MIR5197-201ENST00000583721 112 ntBASIC4.31□□□□□ -1.72
RTN4Q9NQC3 MIR8059-201ENST00000620427 81 ntBASIC4.31□□□□□ -1.72
RTN4Q9NQC3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RTN4Q9NQC3 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RTN4Q9NQC3 PWAR6-201ENST00000552334 4618 ntBASIC4.3□□□□□ -1.72
RTN4Q9NQC3 Y_RNA.547-201ENST00000384654 119 ntBASIC4.3□□□□□ -1.72
RTN4Q9NQC3 MIR141-201ENST00000384975 95 ntBASIC4.3□□□□□ -1.72
RTN4Q9NQC3 RNU6-360P-201ENST00000390944 104 ntBASIC4.3□□□□□ -1.72
RTN4Q9NQC3 SNORD77.3-201ENST00000391113 65 ntBASIC4.3□□□□□ -1.72
RTN4Q9NQC3 PGBD4P5-201ENST00000445958 426 ntBASIC4.3□□□□□ -1.72
RTN4Q9NQC3 AC009220.1-201ENST00000451614 275 ntBASIC4.3□□□□□ -1.72
RTN4Q9NQC3 RNU7-25P-201ENST00000516544 62 ntBASIC4.3□□□□□ -1.72
RTN4Q9NQC3 RNA5SP437-201ENST00000517249 129 ntBASIC4.3□□□□□ -1.72
RTN4Q9NQC3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC4.3□□□□□ -1.72
RTN4Q9NQC3 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.29□□□□□ -1.72
RTN4Q9NQC3 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RTN4Q9NQC3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
RTN4Q9NQC3 Y_RNA.218-201ENST00000364218 104 ntBASIC4.29□□□□□ -1.72
RTN4Q9NQC3 RNA5SP205-201ENST00000364653 136 ntBASIC4.29□□□□□ -1.72
RTN4Q9NQC3 SNORA73.2-201ENST00000364946 201 ntBASIC4.29□□□□□ -1.72
RTN4Q9NQC3 RNU6-805P-201ENST00000365643 106 ntBASIC4.29□□□□□ -1.72
RTN4Q9NQC3 SNORA22C-201ENST00000384614 134 ntBASIC4.29□□□□□ -1.72
RTN4Q9NQC3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC4.29□□□□□ -1.72
RTN4Q9NQC3 CALM2P4-201ENST00000430810 426 ntBASIC4.29□□□□□ -1.72
RTN4Q9NQC3 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.29□□□□□ -1.72
RTN4Q9NQC3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
RTN4Q9NQC3 SCARNA16.3-201ENST00000516595 184 ntBASIC4.29□□□□□ -1.72
RTN4Q9NQC3 AC022695.1-201ENST00000522089 237 ntBASIC4.29□□□□□ -1.72
RTN4Q9NQC3 MIR5096-201ENST00000583713 70 ntBASIC4.29□□□□□ -1.72
RTN4Q9NQC3 AC015726.2-201ENST00000620112 122 ntBASIC4.29□□□□□ -1.72
RTN4Q9NQC3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RTN4Q9NQC3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RTN4Q9NQC3 U8.16-201ENST00000391279 133 ntBASIC4.28□□□□□ -1.72
RTN4Q9NQC3 Y_RNA.629-201ENST00000411368 105 ntBASIC4.28□□□□□ -1.72
RTN4Q9NQC3 HMGN2P35-201ENST00000412164 270 ntBASIC4.28□□□□□ -1.72
RTN4Q9NQC3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC4.28□□□□□ -1.72
RTN4Q9NQC3 RNU7-70P-201ENST00000516941 66 ntBASIC4.28□□□□□ -1.72
RTN4Q9NQC3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC4.28□□□□□ -1.72
RTN4Q9NQC3 MIR3121-201ENST00000579680 77 ntBASIC4.28□□□□□ -1.72
RTN4Q9NQC3 uc_338.25-201ENST00000613756 156 ntBASIC4.28□□□□□ -1.72
RTN4Q9NQC3 RNA5SP196-201ENST00000625967 102 ntBASIC4.28□□□□□ -1.72
RTN4Q9NQC3 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.27□□□□□ -1.73
RTN4Q9NQC3 Y_RNA.37-201ENST00000362606 108 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 499.3 ms