Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 JPX_2.1-201ENST00000614161 69 ntBASIC3.03□□□□□ -1.92
SSU72Q9NP77 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
SSU72Q9NP77 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
SSU72Q9NP77 MAPK10-362ENST00000641864 4484 ntBASIC3.03□□□□□ -1.93
SSU72Q9NP77 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
SSU72Q9NP77 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
SSU72Q9NP77 SNORD15B-201ENST00000384714 146 ntBASIC3.02□□□□□ -1.93
SSU72Q9NP77 MIR548A2-201ENST00000384956 97 ntBASIC3.02□□□□□ -1.93
SSU72Q9NP77 MIR548A3-201ENST00000385297 97 ntBASIC3.02□□□□□ -1.93
SSU72Q9NP77 SNORA12.1-201ENST00000390873 148 ntBASIC3.02□□□□□ -1.93
SSU72Q9NP77 SNORA57.1-201ENST00000391227 145 ntBASIC3.02□□□□□ -1.93
SSU72Q9NP77 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.02□□□□□ -1.93
SSU72Q9NP77 HMGN1P7-201ENST00000491722 313 ntBASIC3.02□□□□□ -1.93
SSU72Q9NP77 AC023141.11-201ENST00000508864 202 ntBASIC3.02□□□□□ -1.93
SSU72Q9NP77 RNU6-504P-201ENST00000516568 104 ntBASIC3.02□□□□□ -1.93
SSU72Q9NP77 RNU6-1291P-201ENST00000516591 104 ntBASIC3.02□□□□□ -1.93
SSU72Q9NP77 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.02□□□□□ -1.93
SSU72Q9NP77 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.02□□□□□ -1.93
SSU72Q9NP77 MIR3160-1-201ENST00000577972 85 ntBASIC3.02□□□□□ -1.93
SSU72Q9NP77 AC068724.3-201ENST00000625906 87 ntBASIC3.02□□□□□ -1.93
SSU72Q9NP77 MIR338-201ENST00000636369 67 ntBASIC3.02□□□□□ -1.93
SSU72Q9NP77 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
SSU72Q9NP77 AC108206.1-201ENST00000570186 4159 ntBASIC3.02□□□□□ -1.93
SSU72Q9NP77 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
SSU72Q9NP77 SNORA33-201ENST00000363664 130 ntBASIC3.01□□□□□ -1.93
SSU72Q9NP77 MIR887-201ENST00000401258 79 ntBASIC3.01□□□□□ -1.93
SSU72Q9NP77 RNA5SP89-201ENST00000410300 108 ntBASIC3.01□□□□□ -1.93
SSU72Q9NP77 AF228730.3-201ENST00000436691 102 ntBASIC3.01□□□□□ -1.93
SSU72Q9NP77 AL021397.1-201ENST00000451806 248 ntBASIC3.01□□□□□ -1.93
SSU72Q9NP77 RNU6-126P-201ENST00000516685 103 ntBASIC3.01□□□□□ -1.93
SSU72Q9NP77 AC008507.4-201ENST00000585464 127 ntBASIC3.01□□□□□ -1.93
SSU72Q9NP77 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.01□□□□□ -1.93
SSU72Q9NP77 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SSU72Q9NP77 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
SSU72Q9NP77 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3□□□□□ -1.93
SSU72Q9NP77 RNU6-888P-201ENST00000363010 101 ntBASIC3□□□□□ -1.93
SSU72Q9NP77 RNU6-1255P-201ENST00000363434 112 ntBASIC3□□□□□ -1.93
SSU72Q9NP77 SNORD114-6-201ENST00000364393 72 ntBASIC3□□□□□ -1.93
SSU72Q9NP77 RNU6-1292P-201ENST00000383856 107 ntBASIC3□□□□□ -1.93
SSU72Q9NP77 MIR548A1-201ENST00000385041 97 ntBASIC3□□□□□ -1.93
SSU72Q9NP77 MIR1193-201ENST00000408109 78 ntBASIC3□□□□□ -1.93
SSU72Q9NP77 Y_RNA.621-201ENST00000411065 96 ntBASIC3□□□□□ -1.93
SSU72Q9NP77 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3□□□□□ -1.93
SSU72Q9NP77 SNRPGP10-201ENST00000432323 225 ntBASIC3□□□□□ -1.93
SSU72Q9NP77 CYP2C59P-201ENST00000457790 269 ntBASIC3□□□□□ -1.93
SSU72Q9NP77 Y_RNA.666-201ENST00000516187 112 ntBASIC3□□□□□ -1.93
SSU72Q9NP77 RNU6-1041P-201ENST00000516254 102 ntBASIC3□□□□□ -1.93
SSU72Q9NP77 VN1R85P-201ENST00000601587 426 ntBASIC3□□□□□ -1.93
SSU72Q9NP77 AC025166.1-201ENST00000612411 163 ntBASIC3□□□□□ -1.93
SSU72Q9NP77 AC007318.2-201ENST00000620999 243 ntBASIC3□□□□□ -1.93
SSU72Q9NP77 MTND5P18-201ENST00000445624 1801 ntBASIC3□□□□□ -1.93
SSU72Q9NP77 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3□□□□□ -1.93
SSU72Q9NP77 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SSU72Q9NP77 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.99□□□□□ -1.93
SSU72Q9NP77 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SSU72Q9NP77 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.99□□□□□ -1.93
SSU72Q9NP77 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SSU72Q9NP77 RNA5SP124-201ENST00000362739 110 ntBASIC2.99□□□□□ -1.93
SSU72Q9NP77 RNU6-220P-201ENST00000390919 107 ntBASIC2.99□□□□□ -1.93
SSU72Q9NP77 AL117342.1-201ENST00000404861 406 ntBASIC2.99□□□□□ -1.93
SSU72Q9NP77 AC233266.1-201ENST00000454518 96 ntBASIC2.99□□□□□ -1.93
SSU72Q9NP77 AC096725.1-201ENST00000514266 313 ntBASIC2.99□□□□□ -1.93
SSU72Q9NP77 SCARNA15-202ENST00000516881 127 ntBASIC2.99□□□□□ -1.93
SSU72Q9NP77 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.99□□□□□ -1.93
SSU72Q9NP77 AC007229.1-201ENST00000590455 412 ntBASIC2.99□□□□□ -1.93
SSU72Q9NP77 AC242852.1-201ENST00000612151 96 ntBASIC2.99□□□□□ -1.93
SSU72Q9NP77 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.99□□□□□ -1.93
SSU72Q9NP77 AC244015.1-201ENST00000622301 99 ntBASIC2.99□□□□□ -1.93
SSU72Q9NP77 MIR6733-201ENST00000635723 61 ntBASIC2.99□□□□□ -1.93
SSU72Q9NP77 MIR6079-201ENST00000635807 62 ntBASIC2.99□□□□□ -1.93
SSU72Q9NP77 MIR376A2-201ENST00000636782 80 ntBASIC2.99□□□□□ -1.93
SSU72Q9NP77 MIR4679-1-201ENST00000637619 75 ntBASIC2.99□□□□□ -1.93
SSU72Q9NP77 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
SSU72Q9NP77 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.98□□□□□ -1.93
SSU72Q9NP77 SNORD77.3-201ENST00000391113 65 ntBASIC2.98□□□□□ -1.93
SSU72Q9NP77 AL031121.1-201ENST00000406553 254 ntBASIC2.98□□□□□ -1.93
SSU72Q9NP77 AL353689.1-201ENST00000438895 199 ntBASIC2.98□□□□□ -1.93
SSU72Q9NP77 CYCSP35-201ENST00000451978 304 ntBASIC2.98□□□□□ -1.93
SSU72Q9NP77 Y_RNA.649-201ENST00000459077 103 ntBASIC2.98□□□□□ -1.93
SSU72Q9NP77 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.98□□□□□ -1.93
SSU72Q9NP77 RNU6-168P-201ENST00000516189 101 ntBASIC2.98□□□□□ -1.93
SSU72Q9NP77 RNU6-1146P-201ENST00000516282 102 ntBASIC2.98□□□□□ -1.93
SSU72Q9NP77 RNU6-1270P-201ENST00000517128 108 ntBASIC2.98□□□□□ -1.93
SSU72Q9NP77 RNU6-667P-201ENST00000517186 102 ntBASIC2.98□□□□□ -1.93
SSU72Q9NP77 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.98□□□□□ -1.93
SSU72Q9NP77 AL121890.5-201ENST00000620848 304 ntBASIC2.98□□□□□ -1.93
SSU72Q9NP77 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SSU72Q9NP77 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
SSU72Q9NP77 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SSU72Q9NP77 AC018630.2-201ENST00000534866 2403 ntBASIC2.97□□□□□ -1.93
SSU72Q9NP77 RNU1-33P-201ENST00000364249 162 ntBASIC2.97□□□□□ -1.93
SSU72Q9NP77 Y_RNA.346-201ENST00000365385 112 ntBASIC2.97□□□□□ -1.93
SSU72Q9NP77 SNORD24-201ENST00000383884 75 ntBASIC2.97□□□□□ -1.93
SSU72Q9NP77 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.97□□□□□ -1.93
SSU72Q9NP77 RN7SL499P-201ENST00000481141 276 ntBASIC2.97□□□□□ -1.93
SSU72Q9NP77 SCGB1D5P-201ENST00000515134 247 ntBASIC2.97□□□□□ -1.93
SSU72Q9NP77 RNU6-341P-201ENST00000516973 96 ntBASIC2.97□□□□□ -1.93
SSU72Q9NP77 AL591926.4-201ENST00000616895 298 ntBASIC2.97□□□□□ -1.93
SSU72Q9NP77 AC034229.5-201ENST00000624258 185 ntBASIC2.97□□□□□ -1.93
SSU72Q9NP77 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms