Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC006435.5-201ENST00000624486 112 ntBASIC2.63□□□□□ -1.99
SEC61A2Q9H9S3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.63□□□□□ -1.99
SEC61A2Q9H9S3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
SEC61A2Q9H9S3 RNU6-834P-201ENST00000362367 110 ntBASIC2.62□□□□□ -1.99
SEC61A2Q9H9S3 Y_RNA.563-201ENST00000384707 108 ntBASIC2.62□□□□□ -1.99
SEC61A2Q9H9S3 RNU6-476P-201ENST00000384726 107 ntBASIC2.62□□□□□ -1.99
SEC61A2Q9H9S3 SNORD88.1-201ENST00000408684 91 ntBASIC2.62□□□□□ -1.99
SEC61A2Q9H9S3 RNU2-55P-201ENST00000411146 174 ntBASIC2.62□□□□□ -1.99
SEC61A2Q9H9S3 MLLT10P1-201ENST00000418346 262 ntBASIC2.62□□□□□ -1.99
SEC61A2Q9H9S3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.62□□□□□ -1.99
SEC61A2Q9H9S3 S100A11P2-201ENST00000467589 312 ntBASIC2.62□□□□□ -1.99
SEC61A2Q9H9S3 AP004217.1-201ENST00000480579 346 ntBASIC2.62□□□□□ -1.99
SEC61A2Q9H9S3 AC097462.1-201ENST00000514125 324 ntBASIC2.62□□□□□ -1.99
SEC61A2Q9H9S3 SCARNA3-201ENST00000517097 143 ntBASIC2.62□□□□□ -1.99
SEC61A2Q9H9S3 AC018630.3-201ENST00000542637 96 ntBASIC2.62□□□□□ -1.99
SEC61A2Q9H9S3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
SEC61A2Q9H9S3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
SEC61A2Q9H9S3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
SEC61A2Q9H9S3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
SEC61A2Q9H9S3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SEC61A2Q9H9S3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
SEC61A2Q9H9S3 RNU6-508P-201ENST00000363231 103 ntBASIC2.61□□□□□ -1.99
SEC61A2Q9H9S3 RNU6-1209P-201ENST00000363655 107 ntBASIC2.61□□□□□ -1.99
SEC61A2Q9H9S3 SNORA44-201ENST00000384584 132 ntBASIC2.61□□□□□ -1.99
SEC61A2Q9H9S3 Y_RNA.621-201ENST00000411065 96 ntBASIC2.61□□□□□ -1.99
SEC61A2Q9H9S3 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.61□□□□□ -1.99
SEC61A2Q9H9S3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.61□□□□□ -1.99
SEC61A2Q9H9S3 AC010154.1-201ENST00000425857 269 ntBASIC2.61□□□□□ -1.99
SEC61A2Q9H9S3 AC025750.2-201ENST00000442609 450 ntBASIC2.61□□□□□ -1.99
SEC61A2Q9H9S3 AC245102.2-201ENST00000448956 180 ntBASIC2.61□□□□□ -1.99
SEC61A2Q9H9S3 CKS1BP2-201ENST00000497342 240 ntBASIC2.61□□□□□ -1.99
SEC61A2Q9H9S3 PDCD5P2-201ENST00000507570 312 ntBASIC2.61□□□□□ -1.99
SEC61A2Q9H9S3 RNU6-772P-201ENST00000516042 105 ntBASIC2.61□□□□□ -1.99
SEC61A2Q9H9S3 RNU6-991P-201ENST00000516168 107 ntBASIC2.61□□□□□ -1.99
SEC61A2Q9H9S3 Y_RNA.692-201ENST00000516627 105 ntBASIC2.61□□□□□ -1.99
SEC61A2Q9H9S3 AC011604.1-201ENST00000545978 196 ntBASIC2.61□□□□□ -1.99
SEC61A2Q9H9S3 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.61□□□□□ -1.99
SEC61A2Q9H9S3 AC105245.1-201ENST00000581934 244 ntBASIC2.61□□□□□ -1.99
SEC61A2Q9H9S3 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.61□□□□□ -1.99
SEC61A2Q9H9S3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.61□□□□□ -1.99
SEC61A2Q9H9S3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.61□□□□□ -1.99
SEC61A2Q9H9S3 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
SEC61A2Q9H9S3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
SEC61A2Q9H9S3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
SEC61A2Q9H9S3 RNU1-23P-201ENST00000363361 144 ntBASIC2.6□□□□□ -1.99
SEC61A2Q9H9S3 Y_RNA.796-201ENST00000364268 102 ntBASIC2.6□□□□□ -1.99
SEC61A2Q9H9S3 Y_RNA.634-201ENST00000364811 113 ntBASIC2.6□□□□□ -1.99
SEC61A2Q9H9S3 Y_RNA.799-201ENST00000364992 102 ntBASIC2.6□□□□□ -1.99
SEC61A2Q9H9S3 MIR181B1-201ENST00000385240 110 ntBASIC2.6□□□□□ -1.99
SEC61A2Q9H9S3 RNY4P18-201ENST00000391107 89 ntBASIC2.6□□□□□ -1.99
SEC61A2Q9H9S3 FO393413.1-201ENST00000402892 195 ntBASIC2.6□□□□□ -1.99
SEC61A2Q9H9S3 MIR1253-201ENST00000408273 105 ntBASIC2.6□□□□□ -1.99
SEC61A2Q9H9S3 AC023449.1-201ENST00000454464 154 ntBASIC2.6□□□□□ -1.99
SEC61A2Q9H9S3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.6□□□□□ -1.99
SEC61A2Q9H9S3 SCGB1D5P-201ENST00000515134 247 ntBASIC2.6□□□□□ -1.99
SEC61A2Q9H9S3 RNU6-1061P-201ENST00000516530 99 ntBASIC2.6□□□□□ -1.99
SEC61A2Q9H9S3 Y_RNA.712-201ENST00000517011 92 ntBASIC2.6□□□□□ -1.99
SEC61A2Q9H9S3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.6□□□□□ -1.99
SEC61A2Q9H9S3 AC108081.1-201ENST00000604358 221 ntBASIC2.6□□□□□ -1.99
SEC61A2Q9H9S3 Pinc.1-201ENST00000616452 154 ntBASIC2.6□□□□□ -1.99
SEC61A2Q9H9S3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SEC61A2Q9H9S3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
SEC61A2Q9H9S3 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SEC61A2Q9H9S3 RNU6-1144P-201ENST00000384247 104 ntBASIC2.59□□□□□ -1.99
SEC61A2Q9H9S3 RNU6-1186P-201ENST00000410429 97 ntBASIC2.59□□□□□ -1.99
SEC61A2Q9H9S3 Y_RNA.630-201ENST00000411370 108 ntBASIC2.59□□□□□ -1.99
SEC61A2Q9H9S3 HMGN2P34-201ENST00000437647 269 ntBASIC2.59□□□□□ -1.99
SEC61A2Q9H9S3 AL161788.1-201ENST00000441805 169 ntBASIC2.59□□□□□ -1.99
SEC61A2Q9H9S3 MTCO1P44-201ENST00000441935 243 ntBASIC2.59□□□□□ -1.99
SEC61A2Q9H9S3 SNORD11-201ENST00000459124 84 ntBASIC2.59□□□□□ -1.99
SEC61A2Q9H9S3 RPS29P21-201ENST00000496272 170 ntBASIC2.59□□□□□ -1.99
SEC61A2Q9H9S3 SNORD77.4-201ENST00000516158 81 ntBASIC2.59□□□□□ -1.99
SEC61A2Q9H9S3 RNU7-149P-201ENST00000516739 59 ntBASIC2.59□□□□□ -1.99
SEC61A2Q9H9S3 AC107016.2-201ENST00000547968 190 ntBASIC2.59□□□□□ -1.99
SEC61A2Q9H9S3 AC133485.4-201ENST00000561835 220 ntBASIC2.59□□□□□ -1.99
SEC61A2Q9H9S3 AC138907.4-201ENST00000570107 226 ntBASIC2.59□□□□□ -1.99
SEC61A2Q9H9S3 MIR2681-201ENST00000581814 105 ntBASIC2.59□□□□□ -1.99
SEC61A2Q9H9S3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.59□□□□□ -1.99
SEC61A2Q9H9S3 MIR5739-201ENST00000619803 80 ntBASIC2.59□□□□□ -1.99
SEC61A2Q9H9S3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.59□□□□□ -1.99
SEC61A2Q9H9S3 AL035425.3-201ENST00000564206 4996 ntBASIC2.59□□□□□ -2
SEC61A2Q9H9S3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -2
SEC61A2Q9H9S3 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.59□□□□□ -2
SEC61A2Q9H9S3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.59□□□□□ -2
SEC61A2Q9H9S3 AC080128.1-201ENST00000474389 1917 ntBASIC2.58□□□□□ -2
SEC61A2Q9H9S3 Z82195.2-201ENST00000612348 18351 ntBASIC2.58□□□□□ -2
SEC61A2Q9H9S3 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SEC61A2Q9H9S3 Y_RNA.111-201ENST00000363248 100 ntBASIC2.58□□□□□ -2
SEC61A2Q9H9S3 Y_RNA.114-201ENST00000363265 113 ntBASIC2.58□□□□□ -2
SEC61A2Q9H9S3 RNU6-525P-201ENST00000363685 104 ntBASIC2.58□□□□□ -2
SEC61A2Q9H9S3 RNA5SP139-201ENST00000364340 117 ntBASIC2.58□□□□□ -2
SEC61A2Q9H9S3 SNORA9.2-201ENST00000365361 133 ntBASIC2.58□□□□□ -2
SEC61A2Q9H9S3 SNORA40.5-201ENST00000391061 128 ntBASIC2.58□□□□□ -2
SEC61A2Q9H9S3 U6atac.2-201ENST00000408644 118 ntBASIC2.58□□□□□ -2
SEC61A2Q9H9S3 AL513477.1-202ENST00000417061 214 ntBASIC2.58□□□□□ -2
SEC61A2Q9H9S3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.58□□□□□ -2
SEC61A2Q9H9S3 AL158147.1-201ENST00000443970 75 ntBASIC2.58□□□□□ -2
SEC61A2Q9H9S3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.58□□□□□ -2
SEC61A2Q9H9S3 RNU2-34P-201ENST00000516534 121 ntBASIC2.58□□□□□ -2
SEC61A2Q9H9S3 RNU6-1096P-201ENST00000517089 102 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 184.6 ms