Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.72□□□□□ -2.13
ZNF541Q9H0D2 MIR4285-201ENST00000581001 85 ntBASIC1.72□□□□□ -2.13
ZNF541Q9H0D2 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.72□□□□□ -2.13
ZNF541Q9H0D2 MIR4438-201ENST00000585271 93 ntBASIC1.72□□□□□ -2.13
ZNF541Q9H0D2 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.72□□□□□ -2.13
ZNF541Q9H0D2 Y_RNA.27-201ENST00000362540 103 ntBASIC1.71□□□□□ -2.14
ZNF541Q9H0D2 Y_RNA.80-201ENST00000362996 102 ntBASIC1.71□□□□□ -2.14
ZNF541Q9H0D2 RNU6-626P-201ENST00000363354 107 ntBASIC1.71□□□□□ -2.14
ZNF541Q9H0D2 Y_RNA.374-201ENST00000365606 101 ntBASIC1.71□□□□□ -2.14
ZNF541Q9H0D2 Y_RNA.424-201ENST00000384063 103 ntBASIC1.71□□□□□ -2.14
ZNF541Q9H0D2 Y_RNA.445-201ENST00000384168 102 ntBASIC1.71□□□□□ -2.14
ZNF541Q9H0D2 Y_RNA.485-201ENST00000384395 102 ntBASIC1.71□□□□□ -2.14
ZNF541Q9H0D2 RPS20P15-201ENST00000412792 311 ntBASIC1.71□□□□□ -2.14
ZNF541Q9H0D2 AC009310.1-201ENST00000414414 451 ntBASIC1.71□□□□□ -2.14
ZNF541Q9H0D2 PMCHL1-202ENST00000423102 261 ntBASIC1.71□□□□□ -2.14
ZNF541Q9H0D2 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.71□□□□□ -2.14
ZNF541Q9H0D2 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.71□□□□□ -2.14
ZNF541Q9H0D2 AC092991.1-201ENST00000477176 376 ntBASIC1.71□□□□□ -2.14
ZNF541Q9H0D2 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.71□□□□□ -2.14
ZNF541Q9H0D2 RNU4-77P-201ENST00000516692 156 ntBASIC1.71□□□□□ -2.14
ZNF541Q9H0D2 RNA5SP481-201ENST00000516814 122 ntBASIC1.71□□□□□ -2.14
ZNF541Q9H0D2 AC024995.1-201ENST00000523014 93 ntBASIC1.71□□□□□ -2.14
ZNF541Q9H0D2 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.71□□□□□ -2.14
ZNF541Q9H0D2 AC010900.2-201ENST00000604508 210 ntBASIC1.71□□□□□ -2.14
ZNF541Q9H0D2 AC007485.1-201ENST00000616755 206 ntBASIC1.71□□□□□ -2.14
ZNF541Q9H0D2 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.71□□□□□ -2.14
ZNF541Q9H0D2 AL606534.2-204ENST00000635008 178 ntBASIC1.71□□□□□ -2.14
ZNF541Q9H0D2 MIR4272-201ENST00000635924 64 ntBASIC1.71□□□□□ -2.14
ZNF541Q9H0D2 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
ZNF541Q9H0D2 MIR598-201ENST00000384868 97 ntBASIC1.7□□□□□ -2.14
ZNF541Q9H0D2 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
ZNF541Q9H0D2 RNU11-5P-201ENST00000391216 129 ntBASIC1.7□□□□□ -2.14
ZNF541Q9H0D2 FTH1P12-201ENST00000432137 551 ntBASIC1.7□□□□□ -2.14
ZNF541Q9H0D2 AC112492.4-201ENST00000456549 352 ntBASIC1.7□□□□□ -2.14
ZNF541Q9H0D2 AC005176.2-201ENST00000596933 147 ntBASIC1.7□□□□□ -2.14
ZNF541Q9H0D2 SNORD58B-201ENST00000607313 66 ntBASIC1.7□□□□□ -2.14
ZNF541Q9H0D2 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
ZNF541Q9H0D2 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
ZNF541Q9H0D2 SNORA33-201ENST00000363664 130 ntBASIC1.69□□□□□ -2.14
ZNF541Q9H0D2 RNU6-271P-201ENST00000363858 105 ntBASIC1.69□□□□□ -2.14
ZNF541Q9H0D2 RNU6-961P-201ENST00000363893 105 ntBASIC1.69□□□□□ -2.14
ZNF541Q9H0D2 RNU6-324P-201ENST00000363957 106 ntBASIC1.69□□□□□ -2.14
ZNF541Q9H0D2 RNA5SP363-201ENST00000365072 115 ntBASIC1.69□□□□□ -2.14
ZNF541Q9H0D2 RNU1-115P-201ENST00000365329 160 ntBASIC1.69□□□□□ -2.14
ZNF541Q9H0D2 RNU6-20P-201ENST00000384106 107 ntBASIC1.69□□□□□ -2.14
ZNF541Q9H0D2 SNORA20B-201ENST00000384220 132 ntBASIC1.69□□□□□ -2.14
ZNF541Q9H0D2 Y_RNA.526-201ENST00000384572 110 ntBASIC1.69□□□□□ -2.14
ZNF541Q9H0D2 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
ZNF541Q9H0D2 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.69□□□□□ -2.14
ZNF541Q9H0D2 RPL31P63-201ENST00000422565 375 ntBASIC1.69□□□□□ -2.14
ZNF541Q9H0D2 AC245047.4-201ENST00000433189 144 ntBASIC1.69□□□□□ -2.14
ZNF541Q9H0D2 AC004223.1-201ENST00000479840 271 ntBASIC1.69□□□□□ -2.14
ZNF541Q9H0D2 RNU7-99P-201ENST00000516271 62 ntBASIC1.69□□□□□ -2.14
ZNF541Q9H0D2 RNU6-1153P-201ENST00000516760 105 ntBASIC1.69□□□□□ -2.14
ZNF541Q9H0D2 Y_RNA.701-201ENST00000516812 110 ntBASIC1.69□□□□□ -2.14
ZNF541Q9H0D2 Y_RNA.772-201ENST00000606692 102 ntBASIC1.69□□□□□ -2.14
ZNF541Q9H0D2 MIR8074-201ENST00000615081 81 ntBASIC1.69□□□□□ -2.14
ZNF541Q9H0D2 AC240442.1-201ENST00000616055 283 ntBASIC1.69□□□□□ -2.14
ZNF541Q9H0D2 U6.73-201ENST00000619194 103 ntBASIC1.69□□□□□ -2.14
ZNF541Q9H0D2 AC006435.5-201ENST00000624486 112 ntBASIC1.69□□□□□ -2.14
ZNF541Q9H0D2 MIR6767-201ENST00000637302 66 ntBASIC1.69□□□□□ -2.14
ZNF541Q9H0D2 RNU6-296P-201ENST00000384608 107 ntBASIC1.68□□□□□ -2.14
ZNF541Q9H0D2 RNU6-360P-201ENST00000390944 104 ntBASIC1.68□□□□□ -2.14
ZNF541Q9H0D2 AL354751.2-201ENST00000415471 210 ntBASIC1.68□□□□□ -2.14
ZNF541Q9H0D2 AC005002.2-201ENST00000438228 269 ntBASIC1.68□□□□□ -2.14
ZNF541Q9H0D2 MTND4P19-201ENST00000446659 478 ntBASIC1.68□□□□□ -2.14
ZNF541Q9H0D2 COX6CP14-201ENST00000469580 174 ntBASIC1.68□□□□□ -2.14
ZNF541Q9H0D2 RNA5SP20-201ENST00000515976 84 ntBASIC1.68□□□□□ -2.14
ZNF541Q9H0D2 RNU6-1223P-201ENST00000517124 104 ntBASIC1.68□□□□□ -2.14
ZNF541Q9H0D2 RNU7-172P-201ENST00000517125 64 ntBASIC1.68□□□□□ -2.14
ZNF541Q9H0D2 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.68□□□□□ -2.14
ZNF541Q9H0D2 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.68□□□□□ -2.14
ZNF541Q9H0D2 MIR5188-201ENST00000583467 113 ntBASIC1.68□□□□□ -2.14
ZNF541Q9H0D2 U6.115-201ENST00000636045 103 ntBASIC1.68□□□□□ -2.14
ZNF541Q9H0D2 SNORD14.1-201ENST00000365609 90 ntBASIC1.67□□□□□ -2.14
ZNF541Q9H0D2 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.67□□□□□ -2.14
ZNF541Q9H0D2 RNU6-950P-201ENST00000384651 107 ntBASIC1.67□□□□□ -2.14
ZNF541Q9H0D2 MIR1267-201ENST00000408723 78 ntBASIC1.67□□□□□ -2.14
ZNF541Q9H0D2 MCFD2P1-201ENST00000417812 300 ntBASIC1.67□□□□□ -2.14
ZNF541Q9H0D2 AC010154.1-201ENST00000425857 269 ntBASIC1.67□□□□□ -2.14
ZNF541Q9H0D2 MTND1P14-201ENST00000427400 950 ntBASIC1.67□□□□□ -2.14
ZNF541Q9H0D2 MTCO2P12-201ENST00000427426 682 ntBASIC1.67□□□□□ -2.14
ZNF541Q9H0D2 RNU7-34P-201ENST00000459394 64 ntBASIC1.67□□□□□ -2.14
ZNF541Q9H0D2 Y_RNA.631-201ENST00000459607 101 ntBASIC1.67□□□□□ -2.14
ZNF541Q9H0D2 RNU6-1012P-201ENST00000516606 109 ntBASIC1.67□□□□□ -2.14
ZNF541Q9H0D2 AP002001.1-203ENST00000534002 267 ntBASIC1.67□□□□□ -2.14
ZNF541Q9H0D2 AC020661.2-201ENST00000560114 134 ntBASIC1.67□□□□□ -2.14
ZNF541Q9H0D2 MIR4709-201ENST00000577272 72 ntBASIC1.67□□□□□ -2.14
ZNF541Q9H0D2 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.67□□□□□ -2.14
ZNF541Q9H0D2 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.67□□□□□ -2.14
ZNF541Q9H0D2 U6.92-201ENST00000636464 89 ntBASIC1.67□□□□□ -2.14
ZNF541Q9H0D2 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
ZNF541Q9H0D2 Y_RNA.128-201ENST00000363391 112 ntBASIC1.66□□□□□ -2.14
ZNF541Q9H0D2 Y_RNA.148-201ENST00000363557 117 ntBASIC1.66□□□□□ -2.14
ZNF541Q9H0D2 Y_RNA.216-201ENST00000364205 93 ntBASIC1.66□□□□□ -2.14
ZNF541Q9H0D2 RNU6-439P-201ENST00000384188 106 ntBASIC1.66□□□□□ -2.14
ZNF541Q9H0D2 RNU6-376P-201ENST00000384731 106 ntBASIC1.66□□□□□ -2.14
ZNF541Q9H0D2 RNA5SP109-201ENST00000391010 116 ntBASIC1.66□□□□□ -2.14
ZNF541Q9H0D2 AL355796.1-201ENST00000406706 323 ntBASIC1.66□□□□□ -2.14
ZNF541Q9H0D2 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms