Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 RNU1-139P-201ENST00000391307 165 ntBASIC0.1□□□□□ -2.39
NKX6-2Q9C056 AL354751.2-201ENST00000415471 210 ntBASIC0.1□□□□□ -2.39
NKX6-2Q9C056 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.1□□□□□ -2.39
NKX6-2Q9C056 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.1□□□□□ -2.39
NKX6-2Q9C056 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.1□□□□□ -2.39
NKX6-2Q9C056 MIR5696-201ENST00000578474 85 ntBASIC0.1□□□□□ -2.39
NKX6-2Q9C056 AC104984.5-201ENST00000586878 94 ntBASIC0.1□□□□□ -2.39
NKX6-2Q9C056 AC124303.1-201ENST00000605703 360 ntBASIC0.1□□□□□ -2.39
NKX6-2Q9C056 AF250324.2-201ENST00000608299 610 ntBASIC0.1□□□□□ -2.39
NKX6-2Q9C056 AC019193.3-201ENST00000609144 554 ntBASIC0.1□□□□□ -2.39
NKX6-2Q9C056 MIR4251-201ENST00000635819 61 ntBASIC0.1□□□□□ -2.39
NKX6-2Q9C056 MIR18A-201ENST00000362310 71 ntBASIC0.09□□□□□ -2.4
NKX6-2Q9C056 Y_RNA.373-201ENST00000365600 103 ntBASIC0.09□□□□□ -2.4
NKX6-2Q9C056 AC117470.1-201ENST00000381974 330 ntBASIC0.09□□□□□ -2.4
NKX6-2Q9C056 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.09□□□□□ -2.4
NKX6-2Q9C056 RNU6-1068P-201ENST00000410958 103 ntBASIC0.09□□□□□ -2.4
NKX6-2Q9C056 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.09□□□□□ -2.4
NKX6-2Q9C056 MTND1P4-201ENST00000435196 415 ntBASIC0.09□□□□□ -2.4
NKX6-2Q9C056 RNU6-956P-201ENST00000458868 103 ntBASIC0.09□□□□□ -2.4
NKX6-2Q9C056 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.09□□□□□ -2.4
NKX6-2Q9C056 Y_RNA.706-201ENST00000516933 99 ntBASIC0.09□□□□□ -2.4
NKX6-2Q9C056 MIR4431-201ENST00000579990 94 ntBASIC0.09□□□□□ -2.4
NKX6-2Q9C056 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.09□□□□□ -2.4
NKX6-2Q9C056 MIR6788-201ENST00000618842 66 ntBASIC0.09□□□□□ -2.4
NKX6-2Q9C056 AC015726.2-201ENST00000620112 122 ntBASIC0.09□□□□□ -2.4
NKX6-2Q9C056 AC092634.7-201ENST00000621022 103 ntBASIC0.09□□□□□ -2.4
NKX6-2Q9C056 MIR6513-201ENST00000621188 64 ntBASIC0.09□□□□□ -2.4
NKX6-2Q9C056 RNU6-369P-201ENST00000362515 102 ntBASIC0.08□□□□□ -2.4
NKX6-2Q9C056 RNA5SP62-201ENST00000363457 110 ntBASIC0.08□□□□□ -2.4
NKX6-2Q9C056 MIR520F-201ENST00000384824 87 ntBASIC0.08□□□□□ -2.4
NKX6-2Q9C056 MIR548J-201ENST00000408833 112 ntBASIC0.08□□□□□ -2.4
NKX6-2Q9C056 RNU6-613P-201ENST00000410412 108 ntBASIC0.08□□□□□ -2.4
NKX6-2Q9C056 RNA5SP511-201ENST00000410487 115 ntBASIC0.08□□□□□ -2.4
NKX6-2Q9C056 MLLT10P1-201ENST00000418346 262 ntBASIC0.08□□□□□ -2.4
NKX6-2Q9C056 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.08□□□□□ -2.4
NKX6-2Q9C056 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.08□□□□□ -2.4
NKX6-2Q9C056 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.08□□□□□ -2.4
NKX6-2Q9C056 MIR4762-201ENST00000585261 75 ntBASIC0.08□□□□□ -2.4
NKX6-2Q9C056 AL138726.1-201ENST00000614873 333 ntBASIC0.08□□□□□ -2.4
NKX6-2Q9C056 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
NKX6-2Q9C056 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.08□□□□□ -2.4
NKX6-2Q9C056 Y_RNA.106-201ENST00000363189 100 ntBASIC0.07□□□□□ -2.4
NKX6-2Q9C056 RNU6-454P-201ENST00000364292 107 ntBASIC0.07□□□□□ -2.4
NKX6-2Q9C056 MIR329-1-201ENST00000385028 80 ntBASIC0.07□□□□□ -2.4
NKX6-2Q9C056 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.07□□□□□ -2.4
NKX6-2Q9C056 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.07□□□□□ -2.4
NKX6-2Q9C056 MIR1276-201ENST00000408707 83 ntBASIC0.07□□□□□ -2.4
NKX6-2Q9C056 SNORD83.1-201ENST00000411362 77 ntBASIC0.07□□□□□ -2.4
NKX6-2Q9C056 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.07□□□□□ -2.4
NKX6-2Q9C056 USMG5P1-201ENST00000425964 177 ntBASIC0.07□□□□□ -2.4
NKX6-2Q9C056 AC015818.7-201ENST00000428754 109 ntBASIC0.07□□□□□ -2.4
NKX6-2Q9C056 DLGAP5P1-201ENST00000430307 464 ntBASIC0.07□□□□□ -2.4
NKX6-2Q9C056 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.07□□□□□ -2.4
NKX6-2Q9C056 AC087499.7-201ENST00000441958 109 ntBASIC0.07□□□□□ -2.4
NKX6-2Q9C056 SNRPGP12-201ENST00000449481 213 ntBASIC0.07□□□□□ -2.4
NKX6-2Q9C056 snoU13.21-201ENST00000459368 105 ntBASIC0.07□□□□□ -2.4
NKX6-2Q9C056 AC105313.1-201ENST00000509121 353 ntBASIC0.07□□□□□ -2.4
NKX6-2Q9C056 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.07□□□□□ -2.4
NKX6-2Q9C056 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.07□□□□□ -2.4
NKX6-2Q9C056 MIR3612-201ENST00000579753 87 ntBASIC0.07□□□□□ -2.4
NKX6-2Q9C056 MIR151B-201ENST00000584249 96 ntBASIC0.07□□□□□ -2.4
NKX6-2Q9C056 AC104695.3-201ENST00000604052 296 ntBASIC0.07□□□□□ -2.4
NKX6-2Q9C056 AC005828.6-201ENST00000606610 232 ntBASIC0.07□□□□□ -2.4
NKX6-2Q9C056 AC092954.2-201ENST00000609103 430 ntBASIC0.07□□□□□ -2.4
NKX6-2Q9C056 ZNF299P-201ENST00000406845 1804 ntBASIC0.06□□□□□ -2.4
NKX6-2Q9C056 Y_RNA.168-201ENST00000363740 102 ntBASIC0.06□□□□□ -2.4
NKX6-2Q9C056 Y_RNA.615-201ENST00000410769 117 ntBASIC0.06□□□□□ -2.4
NKX6-2Q9C056 AC092447.3-201ENST00000426027 686 ntBASIC0.06□□□□□ -2.4
NKX6-2Q9C056 SNORD45.4-201ENST00000516629 73 ntBASIC0.06□□□□□ -2.4
NKX6-2Q9C056 MIR2115-201ENST00000516657 100 ntBASIC0.06□□□□□ -2.4
NKX6-2Q9C056 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.06□□□□□ -2.4
NKX6-2Q9C056 MIR4711-201ENST00000578274 70 ntBASIC0.06□□□□□ -2.4
NKX6-2Q9C056 MIR4273-201ENST00000582824 84 ntBASIC0.06□□□□□ -2.4
NKX6-2Q9C056 AC010525.2-201ENST00000590920 195 ntBASIC0.06□□□□□ -2.4
NKX6-2Q9C056 AC068137.3-201ENST00000639191 341 ntBASIC0.06□□□□□ -2.4
NKX6-2Q9C056 RNU6-1084P-201ENST00000362498 107 ntBASIC0.05□□□□□ -2.4
NKX6-2Q9C056 Y_RNA.253-201ENST00000364562 112 ntBASIC0.05□□□□□ -2.4
NKX6-2Q9C056 RNU4-45P-201ENST00000365469 141 ntBASIC0.05□□□□□ -2.4
NKX6-2Q9C056 SNORD28B-201ENST00000390993 75 ntBASIC0.05□□□□□ -2.4
NKX6-2Q9C056 MIR1295A-201ENST00000408463 79 ntBASIC0.05□□□□□ -2.4
NKX6-2Q9C056 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.05□□□□□ -2.4
NKX6-2Q9C056 MTND1P26-201ENST00000440488 538 ntBASIC0.05□□□□□ -2.4
NKX6-2Q9C056 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.05□□□□□ -2.4
NKX6-2Q9C056 RNU6-625P-201ENST00000459412 107 ntBASIC0.05□□□□□ -2.4
NKX6-2Q9C056 RNU7-66P-201ENST00000459469 62 ntBASIC0.05□□□□□ -2.4
NKX6-2Q9C056 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.05□□□□□ -2.4
NKX6-2Q9C056 SNORA25.12-201ENST00000516202 82 ntBASIC0.05□□□□□ -2.4
NKX6-2Q9C056 RNU6-977P-201ENST00000516411 103 ntBASIC0.05□□□□□ -2.4
NKX6-2Q9C056 RNU6-256P-201ENST00000516747 97 ntBASIC0.05□□□□□ -2.4
NKX6-2Q9C056 AC018448.1-201ENST00000552843 316 ntBASIC0.05□□□□□ -2.4
NKX6-2Q9C056 AC022523.2-201ENST00000561045 150 ntBASIC0.05□□□□□ -2.4
NKX6-2Q9C056 AC090617.3-201ENST00000573670 475 ntBASIC0.05□□□□□ -2.4
NKX6-2Q9C056 MIR548AO-201ENST00000579992 96 ntBASIC0.05□□□□□ -2.4
NKX6-2Q9C056 AC100812.1-201ENST00000607622 580 ntBASIC0.05□□□□□ -2.4
NKX6-2Q9C056 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.05□□□□□ -2.4
NKX6-2Q9C056 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.05□□□□□ -2.4
NKX6-2Q9C056 MIR6863-201ENST00000636112 90 ntBASIC0.05□□□□□ -2.4
NKX6-2Q9C056 Y_RNA.135-201ENST00000363439 95 ntBASIC0.04□□□□□ -2.4
NKX6-2Q9C056 RNU6-1085P-201ENST00000363576 107 ntBASIC0.04□□□□□ -2.4
NKX6-2Q9C056 RNU6-595P-201ENST00000363944 107 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms