Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 RPS29P25-201ENST00000481709 171 ntBASIC0.91□□□□□ -2.26
RPAP1Q9BWH6 OR9P1P-201ENST00000496431 281 ntBASIC0.91□□□□□ -2.26
RPAP1Q9BWH6 RNU4-49P-201ENST00000516080 140 ntBASIC0.91□□□□□ -2.26
RPAP1Q9BWH6 RNU6-917P-201ENST00000516294 104 ntBASIC0.91□□□□□ -2.26
RPAP1Q9BWH6 RNU6-720P-201ENST00000516363 108 ntBASIC0.91□□□□□ -2.26
RPAP1Q9BWH6 Y_RNA.682-201ENST00000516457 100 ntBASIC0.91□□□□□ -2.26
RPAP1Q9BWH6 RNU2-56P-201ENST00000516826 190 ntBASIC0.91□□□□□ -2.26
RPAP1Q9BWH6 RNU6-341P-201ENST00000516973 96 ntBASIC0.91□□□□□ -2.26
RPAP1Q9BWH6 EIF1P4-201ENST00000572664 335 ntBASIC0.91□□□□□ -2.26
RPAP1Q9BWH6 AC136932.1-201ENST00000574771 208 ntBASIC0.91□□□□□ -2.26
RPAP1Q9BWH6 MIR4790-201ENST00000577799 79 ntBASIC0.91□□□□□ -2.26
RPAP1Q9BWH6 MIR5701-3-201ENST00000578890 82 ntBASIC0.91□□□□□ -2.26
RPAP1Q9BWH6 MIR3684-201ENST00000579779 74 ntBASIC0.91□□□□□ -2.26
RPAP1Q9BWH6 MIR5701-1-201ENST00000585138 82 ntBASIC0.91□□□□□ -2.26
RPAP1Q9BWH6 AC125232.2-201ENST00000592457 143 ntBASIC0.91□□□□□ -2.26
RPAP1Q9BWH6 MIR5701-2-201ENST00000615634 82 ntBASIC0.91□□□□□ -2.26
RPAP1Q9BWH6 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.9□□□□□ -2.26
RPAP1Q9BWH6 AC073544.1-201ENST00000600110 1595 ntBASIC0.9□□□□□ -2.27
RPAP1Q9BWH6 RNU4-79P-201ENST00000362764 141 ntBASIC0.9□□□□□ -2.27
RPAP1Q9BWH6 RNU6-623P-201ENST00000363143 105 ntBASIC0.9□□□□□ -2.27
RPAP1Q9BWH6 RNU6-407P-201ENST00000365280 104 ntBASIC0.9□□□□□ -2.27
RPAP1Q9BWH6 SNORA2.2-201ENST00000365473 135 ntBASIC0.9□□□□□ -2.27
RPAP1Q9BWH6 Y_RNA.453-201ENST00000384223 109 ntBASIC0.9□□□□□ -2.27
RPAP1Q9BWH6 Y_RNA.516-201ENST00000384541 124 ntBASIC0.9□□□□□ -2.27
RPAP1Q9BWH6 SNORD116-4-201ENST00000384733 96 ntBASIC0.9□□□□□ -2.27
RPAP1Q9BWH6 MIR19B1-201ENST00000384829 87 ntBASIC0.9□□□□□ -2.27
RPAP1Q9BWH6 MIR562-201ENST00000384894 95 ntBASIC0.9□□□□□ -2.27
RPAP1Q9BWH6 MIR146A-201ENST00000385201 99 ntBASIC0.9□□□□□ -2.27
RPAP1Q9BWH6 AL139396.1-201ENST00000421137 167 ntBASIC0.9□□□□□ -2.27
RPAP1Q9BWH6 AC245047.7-201ENST00000440265 293 ntBASIC0.9□□□□□ -2.27
RPAP1Q9BWH6 UQCRBP2-201ENST00000447827 297 ntBASIC0.9□□□□□ -2.27
RPAP1Q9BWH6 AC093850.1-201ENST00000454121 251 ntBASIC0.9□□□□□ -2.27
RPAP1Q9BWH6 UBL5P1-201ENST00000507979 193 ntBASIC0.9□□□□□ -2.27
RPAP1Q9BWH6 RNU7-12P-201ENST00000516030 62 ntBASIC0.9□□□□□ -2.27
RPAP1Q9BWH6 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.9□□□□□ -2.27
RPAP1Q9BWH6 AC080078.2-201ENST00000603766 501 ntBASIC0.9□□□□□ -2.27
RPAP1Q9BWH6 AC012676.2-201ENST00000619258 186 ntBASIC0.9□□□□□ -2.27
RPAP1Q9BWH6 AC010487.4-201ENST00000637027 61 ntBASIC0.9□□□□□ -2.27
RPAP1Q9BWH6 AC005592.1-201ENST00000566527 1640 ntBASIC0.89□□□□□ -2.27
RPAP1Q9BWH6 SNORA27.1-201ENST00000362604 124 ntBASIC0.89□□□□□ -2.27
RPAP1Q9BWH6 SNORD114-23-201ENST00000363536 72 ntBASIC0.89□□□□□ -2.27
RPAP1Q9BWH6 Y_RNA.364-201ENST00000365532 101 ntBASIC0.89□□□□□ -2.27
RPAP1Q9BWH6 AL451046.2-201ENST00000403074 277 ntBASIC0.89□□□□□ -2.27
RPAP1Q9BWH6 AC018865.2-201ENST00000423631 129 ntBASIC0.89□□□□□ -2.27
RPAP1Q9BWH6 PCNPP5-201ENST00000452246 481 ntBASIC0.89□□□□□ -2.27
RPAP1Q9BWH6 RNU7-87P-201ENST00000459343 62 ntBASIC0.89□□□□□ -2.27
RPAP1Q9BWH6 MTND5P5-201ENST00000503764 376 ntBASIC0.89□□□□□ -2.27
RPAP1Q9BWH6 AC105313.1-201ENST00000509121 353 ntBASIC0.89□□□□□ -2.27
RPAP1Q9BWH6 RNU6-322P-201ENST00000516010 103 ntBASIC0.89□□□□□ -2.27
RPAP1Q9BWH6 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.89□□□□□ -2.27
RPAP1Q9BWH6 AC018462.2-201ENST00000605375 395 ntBASIC0.89□□□□□ -2.27
RPAP1Q9BWH6 AL357075.2-201ENST00000614906 189 ntBASIC0.89□□□□□ -2.27
RPAP1Q9BWH6 MIR6866-201ENST00000638146 69 ntBASIC0.89□□□□□ -2.27
RPAP1Q9BWH6 AL391516.1-201ENST00000554380 2449 ntBASIC0.88□□□□□ -2.27
RPAP1Q9BWH6 SNORA1B-201ENST00000362535 133 ntBASIC0.88□□□□□ -2.27
RPAP1Q9BWH6 Y_RNA.473-201ENST00000384333 102 ntBASIC0.88□□□□□ -2.27
RPAP1Q9BWH6 Y_RNA.498-201ENST00000384460 102 ntBASIC0.88□□□□□ -2.27
RPAP1Q9BWH6 Y_RNA.557-201ENST00000384680 107 ntBASIC0.88□□□□□ -2.27
RPAP1Q9BWH6 RNU6-376P-201ENST00000384731 106 ntBASIC0.88□□□□□ -2.27
RPAP1Q9BWH6 RNU6-700P-201ENST00000391043 107 ntBASIC0.88□□□□□ -2.27
RPAP1Q9BWH6 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.88□□□□□ -2.27
RPAP1Q9BWH6 AC002429.1-201ENST00000437672 148 ntBASIC0.88□□□□□ -2.27
RPAP1Q9BWH6 AC022493.2-201ENST00000506122 481 ntBASIC0.88□□□□□ -2.27
RPAP1Q9BWH6 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.88□□□□□ -2.27
RPAP1Q9BWH6 AC026782.1-201ENST00000512952 449 ntBASIC0.88□□□□□ -2.27
RPAP1Q9BWH6 AC074133.1-201ENST00000515696 183 ntBASIC0.88□□□□□ -2.27
RPAP1Q9BWH6 AP002004.2-201ENST00000531656 154 ntBASIC0.88□□□□□ -2.27
RPAP1Q9BWH6 AC005014.2-201ENST00000607795 599 ntBASIC0.88□□□□□ -2.27
RPAP1Q9BWH6 U4.5-201ENST00000617137 123 ntBASIC0.88□□□□□ -2.27
RPAP1Q9BWH6 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.88□□□□□ -2.27
RPAP1Q9BWH6 Y_RNA.2-201ENST00000362330 96 ntBASIC0.87□□□□□ -2.27
RPAP1Q9BWH6 Y_RNA.363-201ENST00000365529 113 ntBASIC0.87□□□□□ -2.27
RPAP1Q9BWH6 RNA5SP482-201ENST00000391269 118 ntBASIC0.87□□□□□ -2.27
RPAP1Q9BWH6 RNU6-329P-201ENST00000459618 107 ntBASIC0.87□□□□□ -2.27
RPAP1Q9BWH6 SNORD79.1-201ENST00000516069 84 ntBASIC0.87□□□□□ -2.27
RPAP1Q9BWH6 AC018448.1-201ENST00000552843 316 ntBASIC0.87□□□□□ -2.27
RPAP1Q9BWH6 AC104260.1-201ENST00000616660 539 ntBASIC0.87□□□□□ -2.27
RPAP1Q9BWH6 MIR6835-201ENST00000621552 64 ntBASIC0.87□□□□□ -2.27
RPAP1Q9BWH6 U6.115-201ENST00000636045 103 ntBASIC0.87□□□□□ -2.27
RPAP1Q9BWH6 MIR3688-2-201ENST00000636963 87 ntBASIC0.87□□□□□ -2.27
RPAP1Q9BWH6 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.86□□□□□ -2.27
RPAP1Q9BWH6 RNU6-879P-201ENST00000364328 108 ntBASIC0.86□□□□□ -2.27
RPAP1Q9BWH6 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.86□□□□□ -2.27
RPAP1Q9BWH6 MIR508-201ENST00000384857 115 ntBASIC0.86□□□□□ -2.27
RPAP1Q9BWH6 SNORD12-201ENST00000391002 90 ntBASIC0.86□□□□□ -2.27
RPAP1Q9BWH6 SNORD115-47-201ENST00000391226 86 ntBASIC0.86□□□□□ -2.27
RPAP1Q9BWH6 MIR548F1-201ENST00000408667 84 ntBASIC0.86□□□□□ -2.27
RPAP1Q9BWH6 AC074085.1-201ENST00000413598 418 ntBASIC0.86□□□□□ -2.27
RPAP1Q9BWH6 AC063976.4-201ENST00000421971 163 ntBASIC0.86□□□□□ -2.27
RPAP1Q9BWH6 MTCYBP10-201ENST00000424905 650 ntBASIC0.86□□□□□ -2.27
RPAP1Q9BWH6 AL137792.2-201ENST00000443484 235 ntBASIC0.86□□□□□ -2.27
RPAP1Q9BWH6 UBE2V1P7-201ENST00000446395 340 ntBASIC0.86□□□□□ -2.27
RPAP1Q9BWH6 RNU6-1291P-201ENST00000516591 104 ntBASIC0.86□□□□□ -2.27
RPAP1Q9BWH6 AC105029.1-201ENST00000520250 669 ntBASIC0.86□□□□□ -2.27
RPAP1Q9BWH6 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.86□□□□□ -2.27
RPAP1Q9BWH6 AL357312.1-201ENST00000603879 298 ntBASIC0.86□□□□□ -2.27
RPAP1Q9BWH6 AC090517.2-201ENST00000614966 680 ntBASIC0.86□□□□□ -2.27
RPAP1Q9BWH6 AC127459.3-201ENST00000624328 466 ntBASIC0.86□□□□□ -2.27
RPAP1Q9BWH6 AL589743.1-201ENST00000551932 2712 ntBASIC0.86□□□□□ -2.27
RPAP1Q9BWH6 MIRLET7C-201ENST00000362160 84 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms