Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 MIR4423-201ENST00000580922 80 ntBASIC0.98□□□□□ -2.25
HDHD3Q9BSH5 AC073349.3-201ENST00000617616 186 ntBASIC0.98□□□□□ -2.25
HDHD3Q9BSH5 AC127459.3-201ENST00000624328 466 ntBASIC0.98□□□□□ -2.25
HDHD3Q9BSH5 U6.92-201ENST00000636464 89 ntBASIC0.98□□□□□ -2.25
HDHD3Q9BSH5 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
HDHD3Q9BSH5 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.97□□□□□ -2.25
HDHD3Q9BSH5 Y_RNA.252-201ENST00000364556 101 ntBASIC0.97□□□□□ -2.25
HDHD3Q9BSH5 Y_RNA.384-201ENST00000383909 102 ntBASIC0.97□□□□□ -2.25
HDHD3Q9BSH5 RNU6-926P-201ENST00000384075 107 ntBASIC0.97□□□□□ -2.25
HDHD3Q9BSH5 RNU6-20P-201ENST00000384106 107 ntBASIC0.97□□□□□ -2.25
HDHD3Q9BSH5 RNU6-505P-201ENST00000384427 107 ntBASIC0.97□□□□□ -2.25
HDHD3Q9BSH5 MIR653-201ENST00000385279 96 ntBASIC0.97□□□□□ -2.25
HDHD3Q9BSH5 RNU6-1009P-201ENST00000390996 107 ntBASIC0.97□□□□□ -2.25
HDHD3Q9BSH5 AL034345.1-201ENST00000407768 123 ntBASIC0.97□□□□□ -2.25
HDHD3Q9BSH5 RNU4-62P-201ENST00000410125 130 ntBASIC0.97□□□□□ -2.25
HDHD3Q9BSH5 RNU2-54P-201ENST00000410299 190 ntBASIC0.97□□□□□ -2.25
HDHD3Q9BSH5 AL591704.2-201ENST00000421658 181 ntBASIC0.97□□□□□ -2.25
HDHD3Q9BSH5 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.97□□□□□ -2.25
HDHD3Q9BSH5 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.97□□□□□ -2.25
HDHD3Q9BSH5 HSPE1P13-201ENST00000451143 297 ntBASIC0.97□□□□□ -2.25
HDHD3Q9BSH5 RN7SL429P-201ENST00000479090 223 ntBASIC0.97□□□□□ -2.25
HDHD3Q9BSH5 RN7SL489P-201ENST00000486185 223 ntBASIC0.97□□□□□ -2.25
HDHD3Q9BSH5 RN7SL327P-201ENST00000488659 223 ntBASIC0.97□□□□□ -2.25
HDHD3Q9BSH5 RNU6-63P-201ENST00000516690 95 ntBASIC0.97□□□□□ -2.25
HDHD3Q9BSH5 RNU4-77P-201ENST00000516692 156 ntBASIC0.97□□□□□ -2.25
HDHD3Q9BSH5 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.97□□□□□ -2.25
HDHD3Q9BSH5 RAB11AP2-201ENST00000545905 639 ntBASIC0.97□□□□□ -2.25
HDHD3Q9BSH5 MIR4659A-201ENST00000580269 81 ntBASIC0.97□□□□□ -2.25
HDHD3Q9BSH5 AL162424.1-201ENST00000602325 221 ntBASIC0.97□□□□□ -2.25
HDHD3Q9BSH5 AL021879.1-201ENST00000611756 288 ntBASIC0.97□□□□□ -2.25
HDHD3Q9BSH5 AC040896.1-201ENST00000613819 479 ntBASIC0.97□□□□□ -2.25
HDHD3Q9BSH5 AC011476.5-201ENST00000615594 130 ntBASIC0.97□□□□□ -2.25
HDHD3Q9BSH5 AC010205.1-201ENST00000616668 449 ntBASIC0.97□□□□□ -2.25
HDHD3Q9BSH5 RN7SL853P-201ENST00000617250 223 ntBASIC0.97□□□□□ -2.25
HDHD3Q9BSH5 AL121890.5-201ENST00000620848 304 ntBASIC0.97□□□□□ -2.25
HDHD3Q9BSH5 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
HDHD3Q9BSH5 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC0.96□□□□□ -2.26
HDHD3Q9BSH5 Y_RNA.58-201ENST00000362807 102 ntBASIC0.96□□□□□ -2.26
HDHD3Q9BSH5 RNU6-626P-201ENST00000363354 107 ntBASIC0.96□□□□□ -2.26
HDHD3Q9BSH5 Y_RNA.154-201ENST00000363624 102 ntBASIC0.96□□□□□ -2.26
HDHD3Q9BSH5 Y_RNA.172-201ENST00000363765 102 ntBASIC0.96□□□□□ -2.26
HDHD3Q9BSH5 RNY3P1-201ENST00000365085 102 ntBASIC0.96□□□□□ -2.26
HDHD3Q9BSH5 Y_RNA.314-201ENST00000365114 102 ntBASIC0.96□□□□□ -2.26
HDHD3Q9BSH5 RNY3-201ENST00000365484 102 ntBASIC0.96□□□□□ -2.26
HDHD3Q9BSH5 SNORD78.2-201ENST00000391076 69 ntBASIC0.96□□□□□ -2.26
HDHD3Q9BSH5 U8.16-201ENST00000391279 133 ntBASIC0.96□□□□□ -2.26
HDHD3Q9BSH5 AL031003.1-201ENST00000404229 172 ntBASIC0.96□□□□□ -2.26
HDHD3Q9BSH5 RNA5SP511-201ENST00000410487 115 ntBASIC0.96□□□□□ -2.26
HDHD3Q9BSH5 CALM2P4-201ENST00000430810 426 ntBASIC0.96□□□□□ -2.26
HDHD3Q9BSH5 AL591806.2-201ENST00000433122 173 ntBASIC0.96□□□□□ -2.26
HDHD3Q9BSH5 AL162725.1-201ENST00000435405 301 ntBASIC0.96□□□□□ -2.26
HDHD3Q9BSH5 AL135790.2-201ENST00000437701 267 ntBASIC0.96□□□□□ -2.26
HDHD3Q9BSH5 MTATP6P23-201ENST00000440153 476 ntBASIC0.96□□□□□ -2.26
HDHD3Q9BSH5 STAG3L5P-204ENST00000443759 179 ntBASIC0.96□□□□□ -2.26
HDHD3Q9BSH5 AL049830.1-201ENST00000468034 425 ntBASIC0.96□□□□□ -2.26
HDHD3Q9BSH5 AC092991.1-201ENST00000477176 376 ntBASIC0.96□□□□□ -2.26
HDHD3Q9BSH5 AC093852.1-201ENST00000503587 266 ntBASIC0.96□□□□□ -2.26
HDHD3Q9BSH5 RNU6-436P-201ENST00000516171 114 ntBASIC0.96□□□□□ -2.26
HDHD3Q9BSH5 RNA5SP168-201ENST00000516642 112 ntBASIC0.96□□□□□ -2.26
HDHD3Q9BSH5 AL358944.1-201ENST00000528537 144 ntBASIC0.96□□□□□ -2.26
HDHD3Q9BSH5 CYP3A52P-201ENST00000563326 91 ntBASIC0.96□□□□□ -2.26
HDHD3Q9BSH5 VN1R91P-201ENST00000594377 169 ntBASIC0.96□□□□□ -2.26
HDHD3Q9BSH5 AL117336.2-201ENST00000602435 335 ntBASIC0.96□□□□□ -2.26
HDHD3Q9BSH5 SNORD58B-201ENST00000607313 66 ntBASIC0.96□□□□□ -2.26
HDHD3Q9BSH5 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.96□□□□□ -2.26
HDHD3Q9BSH5 AC133104.2-201ENST00000615272 193 ntBASIC0.96□□□□□ -2.26
HDHD3Q9BSH5 AC005592.1-201ENST00000566527 1640 ntBASIC0.96□□□□□ -2.26
HDHD3Q9BSH5 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
HDHD3Q9BSH5 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
HDHD3Q9BSH5 RNU4-79P-201ENST00000362764 141 ntBASIC0.95□□□□□ -2.26
HDHD3Q9BSH5 Y_RNA.446-201ENST00000384178 104 ntBASIC0.95□□□□□ -2.26
HDHD3Q9BSH5 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.95□□□□□ -2.26
HDHD3Q9BSH5 SNX2P2-201ENST00000424553 323 ntBASIC0.95□□□□□ -2.26
HDHD3Q9BSH5 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.95□□□□□ -2.26
HDHD3Q9BSH5 MTND3P22-201ENST00000510932 243 ntBASIC0.95□□□□□ -2.26
HDHD3Q9BSH5 AL117351.2-201ENST00000513571 157 ntBASIC0.95□□□□□ -2.26
HDHD3Q9BSH5 RNU6-1337P-201ENST00000516525 95 ntBASIC0.95□□□□□ -2.26
HDHD3Q9BSH5 AP002004.2-201ENST00000531656 154 ntBASIC0.95□□□□□ -2.26
HDHD3Q9BSH5 MIR3937-201ENST00000580135 106 ntBASIC0.95□□□□□ -2.26
HDHD3Q9BSH5 MIR5188-201ENST00000583467 113 ntBASIC0.95□□□□□ -2.26
HDHD3Q9BSH5 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.95□□□□□ -2.26
HDHD3Q9BSH5 AC022441.3-201ENST00000605737 136 ntBASIC0.95□□□□□ -2.26
HDHD3Q9BSH5 AL512598.1-201ENST00000610158 273 ntBASIC0.95□□□□□ -2.26
HDHD3Q9BSH5 Y_RNA.146-201ENST00000363549 102 ntBASIC0.94□□□□□ -2.26
HDHD3Q9BSH5 Y_RNA.230-201ENST00000364348 109 ntBASIC0.94□□□□□ -2.26
HDHD3Q9BSH5 RNU4-41P-201ENST00000364426 143 ntBASIC0.94□□□□□ -2.26
HDHD3Q9BSH5 RNU1-115P-201ENST00000365329 160 ntBASIC0.94□□□□□ -2.26
HDHD3Q9BSH5 RNA5SP259-201ENST00000365541 109 ntBASIC0.94□□□□□ -2.26
HDHD3Q9BSH5 SNORD116-13-201ENST00000384408 92 ntBASIC0.94□□□□□ -2.26
HDHD3Q9BSH5 Y_RNA.570-201ENST00000384750 101 ntBASIC0.94□□□□□ -2.26
HDHD3Q9BSH5 SNORD41-201ENST00000386967 70 ntBASIC0.94□□□□□ -2.26
HDHD3Q9BSH5 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
HDHD3Q9BSH5 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.94□□□□□ -2.26
HDHD3Q9BSH5 Y_RNA.605-201ENST00000410577 105 ntBASIC0.94□□□□□ -2.26
HDHD3Q9BSH5 AL354751.2-201ENST00000415471 210 ntBASIC0.94□□□□□ -2.26
HDHD3Q9BSH5 AC093019.1-201ENST00000443135 252 ntBASIC0.94□□□□□ -2.26
HDHD3Q9BSH5 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.94□□□□□ -2.26
HDHD3Q9BSH5 RNU7-95P-201ENST00000459222 64 ntBASIC0.94□□□□□ -2.26
HDHD3Q9BSH5 SNORA25.10-201ENST00000515926 124 ntBASIC0.94□□□□□ -2.26
HDHD3Q9BSH5 RNU6-1278P-201ENST00000516130 107 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms