Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 RNU6-418P-201ENST00000384035 107 ntBASIC1.06□□□□□ -2.24
CDX2Q99626 Y_RNA.460-201ENST00000384255 102 ntBASIC1.06□□□□□ -2.24
CDX2Q99626 RNU6-975P-201ENST00000384296 105 ntBASIC1.06□□□□□ -2.24
CDX2Q99626 RNU6-1026P-201ENST00000384465 108 ntBASIC1.06□□□□□ -2.24
CDX2Q99626 RNU6-1235P-201ENST00000384559 107 ntBASIC1.06□□□□□ -2.24
CDX2Q99626 RNU6-939P-201ENST00000384634 107 ntBASIC1.06□□□□□ -2.24
CDX2Q99626 AC018865.2-201ENST00000423631 129 ntBASIC1.06□□□□□ -2.24
CDX2Q99626 RPS27P16-201ENST00000425758 201 ntBASIC1.06□□□□□ -2.24
CDX2Q99626 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.06□□□□□ -2.24
CDX2Q99626 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.06□□□□□ -2.24
CDX2Q99626 MTND4P19-201ENST00000446659 478 ntBASIC1.06□□□□□ -2.24
CDX2Q99626 RPS27P1-201ENST00000450552 247 ntBASIC1.06□□□□□ -2.24
CDX2Q99626 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.06□□□□□ -2.24
CDX2Q99626 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.06□□□□□ -2.24
CDX2Q99626 snoU13.9-201ENST00000458927 103 ntBASIC1.06□□□□□ -2.24
CDX2Q99626 RNU6-498P-201ENST00000459468 107 ntBASIC1.06□□□□□ -2.24
CDX2Q99626 RPS26P55-201ENST00000471178 356 ntBASIC1.06□□□□□ -2.24
CDX2Q99626 AC011406.1-201ENST00000512440 370 ntBASIC1.06□□□□□ -2.24
CDX2Q99626 RNU4-77P-201ENST00000516692 156 ntBASIC1.06□□□□□ -2.24
CDX2Q99626 RNU6-902P-201ENST00000517212 91 ntBASIC1.06□□□□□ -2.24
CDX2Q99626 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.06□□□□□ -2.24
CDX2Q99626 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.06□□□□□ -2.24
CDX2Q99626 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.06□□□□□ -2.24
CDX2Q99626 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.06□□□□□ -2.24
CDX2Q99626 RRN3P3-201ENST00000549207 578 ntBASIC1.06□□□□□ -2.24
CDX2Q99626 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.06□□□□□ -2.24
CDX2Q99626 AC104695.3-201ENST00000604052 296 ntBASIC1.06□□□□□ -2.24
CDX2Q99626 Y_RNA.26-201ENST00000362539 101 ntBASIC1.05□□□□□ -2.24
CDX2Q99626 Y_RNA.106-201ENST00000363189 100 ntBASIC1.05□□□□□ -2.24
CDX2Q99626 Y_RNA.146-201ENST00000363549 102 ntBASIC1.05□□□□□ -2.24
CDX2Q99626 RNU1-96P-201ENST00000364163 162 ntBASIC1.05□□□□□ -2.24
CDX2Q99626 RNU4-38P-201ENST00000364472 129 ntBASIC1.05□□□□□ -2.24
CDX2Q99626 Y_RNA.512-201ENST00000384518 102 ntBASIC1.05□□□□□ -2.24
CDX2Q99626 MIR586-201ENST00000385035 97 ntBASIC1.05□□□□□ -2.24
CDX2Q99626 MIR1267-201ENST00000408723 78 ntBASIC1.05□□□□□ -2.24
CDX2Q99626 RNU6-1156P-201ENST00000410365 100 ntBASIC1.05□□□□□ -2.24
CDX2Q99626 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.05□□□□□ -2.24
CDX2Q99626 MTCO2P27-201ENST00000420740 428 ntBASIC1.05□□□□□ -2.24
CDX2Q99626 USMG5P1-201ENST00000425964 177 ntBASIC1.05□□□□□ -2.24
CDX2Q99626 AC027119.1-201ENST00000440877 241 ntBASIC1.05□□□□□ -2.24
CDX2Q99626 AC004386.2-201ENST00000441858 148 ntBASIC1.05□□□□□ -2.24
CDX2Q99626 AL118496.2-201ENST00000448300 230 ntBASIC1.05□□□□□ -2.24
CDX2Q99626 AC010655.3-201ENST00000478818 450 ntBASIC1.05□□□□□ -2.24
CDX2Q99626 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.05□□□□□ -2.24
CDX2Q99626 RNU6-1041P-201ENST00000516254 102 ntBASIC1.05□□□□□ -2.24
CDX2Q99626 RNU6-966P-201ENST00000516479 104 ntBASIC1.05□□□□□ -2.24
CDX2Q99626 RNU6-1046P-201ENST00000516538 107 ntBASIC1.05□□□□□ -2.24
CDX2Q99626 AC090821.2-201ENST00000523552 176 ntBASIC1.05□□□□□ -2.24
CDX2Q99626 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.05□□□□□ -2.24
CDX2Q99626 MIR4273-201ENST00000582824 84 ntBASIC1.05□□□□□ -2.24
CDX2Q99626 MIR5690-201ENST00000583739 73 ntBASIC1.05□□□□□ -2.24
CDX2Q99626 AC092447.9-201ENST00000603395 144 ntBASIC1.05□□□□□ -2.24
CDX2Q99626 AC006157.1-201ENST00000611750 366 ntBASIC1.05□□□□□ -2.24
CDX2Q99626 AL357075.2-201ENST00000614906 189 ntBASIC1.05□□□□□ -2.24
CDX2Q99626 PISRT1.1-201ENST00000616930 107 ntBASIC1.05□□□□□ -2.24
CDX2Q99626 AC090971.5-201ENST00000621102 293 ntBASIC1.05□□□□□ -2.24
CDX2Q99626 MTND5P16-201ENST00000460269 1703 ntBASIC1.05□□□□□ -2.24
CDX2Q99626 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.04□□□□□ -2.24
CDX2Q99626 AL442644.1-201ENST00000454390 3105 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 Y_RNA.11-201ENST00000362375 109 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 RNA5SP361-201ENST00000362686 118 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 SNORA33-201ENST00000363664 130 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 RNU6-414P-201ENST00000363705 104 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 SNORA63C-201ENST00000364578 129 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 SNORD1A-201ENST00000364968 72 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 RNU6-596P-201ENST00000365395 98 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 Y_RNA.358-201ENST00000365491 99 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 RNU6-968P-201ENST00000384076 107 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 Y_RNA.445-201ENST00000384168 102 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 RNU6-318P-201ENST00000384283 103 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 Y_RNA.527-201ENST00000384573 102 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 Y_RNA.557-201ENST00000384680 107 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 MIR32-201ENST00000384965 70 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 MIR548P-201ENST00000408336 84 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 RNA5SP504-201ENST00000410676 117 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 AC016909.1-201ENST00000415916 166 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 MCFD2P1-201ENST00000417812 300 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 AL591704.2-201ENST00000421658 181 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.04□□□□□ -2.24
CDX2Q99626 AC092423.1-201ENST00000430165 186 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 RPL23AP50-201ENST00000434149 455 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 AC015922.2-201ENST00000435593 184 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 HMGN2P34-201ENST00000437647 269 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 DAP3P1-201ENST00000441522 278 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 MTCO3P8-201ENST00000453691 755 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 MTATP8P1-201ENST00000467115 207 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 AC010469.2-201ENST00000496412 480 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.04□□□□□ -2.24
CDX2Q99626 ACA59.1-201ENST00000515966 143 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 RN7SKP179-201ENST00000516126 217 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 RN7SKP295-201ENST00000517264 153 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 AK6P2-201ENST00000549020 471 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 AC055872.1-201ENST00000570978 278 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 MIR4698-201ENST00000577795 80 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 AL021879.1-201ENST00000611756 288 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.04□□□□□ -2.24
CDX2Q99626 AC011476.5-201ENST00000615594 130 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 SCARNA4-201ENST00000629045 128 ntBASIC1.04□□□□□ -2.24
CDX2Q99626 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms