Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 RNU1-22P-201ENST00000363334 158 ntBASIC1.08□□□□□ -2.24
SCN2AQ99250 RNA5SP323-201ENST00000391094 133 ntBASIC1.08□□□□□ -2.24
SCN2AQ99250 MIR190B-201ENST00000401119 79 ntBASIC1.08□□□□□ -2.24
SCN2AQ99250 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.08□□□□□ -2.24
SCN2AQ99250 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.08□□□□□ -2.24
SCN2AQ99250 MTCO3P10-201ENST00000455912 772 ntBASIC1.08□□□□□ -2.24
SCN2AQ99250 AC025465.3-201ENST00000510570 311 ntBASIC1.08□□□□□ -2.24
SCN2AQ99250 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.08□□□□□ -2.24
SCN2AQ99250 MIR151B-201ENST00000584249 96 ntBASIC1.08□□□□□ -2.24
SCN2AQ99250 PRR13P7-201ENST00000605538 430 ntBASIC1.08□□□□□ -2.24
SCN2AQ99250 AC021506.2-201ENST00000612354 169 ntBASIC1.08□□□□□ -2.24
SCN2AQ99250 Y_RNA.331-201ENST00000365267 102 ntBASIC1.08□□□□□ -2.24
SCN2AQ99250 RNU6-1080P-201ENST00000383982 107 ntBASIC1.08□□□□□ -2.24
SCN2AQ99250 AL355796.1-201ENST00000406706 323 ntBASIC1.08□□□□□ -2.24
SCN2AQ99250 MRPS18CP6-201ENST00000423587 223 ntBASIC1.08□□□□□ -2.24
SCN2AQ99250 MTND1P14-201ENST00000427400 950 ntBASIC1.08□□□□□ -2.24
SCN2AQ99250 UQCRBP2-201ENST00000447827 297 ntBASIC1.08□□□□□ -2.24
SCN2AQ99250 RPS27P1-201ENST00000450552 247 ntBASIC1.08□□□□□ -2.24
SCN2AQ99250 Y_RNA.632-201ENST00000459189 102 ntBASIC1.08□□□□□ -2.24
SCN2AQ99250 RNU7-34P-201ENST00000459394 64 ntBASIC1.08□□□□□ -2.24
SCN2AQ99250 RPS26P45-201ENST00000471748 340 ntBASIC1.08□□□□□ -2.24
SCN2AQ99250 RN7SKP179-201ENST00000516126 217 ntBASIC1.08□□□□□ -2.24
SCN2AQ99250 RNU6-1291P-201ENST00000516591 104 ntBASIC1.08□□□□□ -2.24
SCN2AQ99250 AC023157.2-201ENST00000540596 141 ntBASIC1.08□□□□□ -2.24
SCN2AQ99250 AC240442.1-201ENST00000616055 283 ntBASIC1.08□□□□□ -2.24
SCN2AQ99250 MTND4LP32-201ENST00000636111 270 ntBASIC1.08□□□□□ -2.24
SCN2AQ99250 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
SCN2AQ99250 RNU1-93P-201ENST00000364704 169 ntBASIC1.07□□□□□ -2.24
SCN2AQ99250 Y_RNA.463-201ENST00000384271 102 ntBASIC1.07□□□□□ -2.24
SCN2AQ99250 Y_RNA.471-201ENST00000384312 102 ntBASIC1.07□□□□□ -2.24
SCN2AQ99250 PGBD4P5-201ENST00000445958 426 ntBASIC1.07□□□□□ -2.24
SCN2AQ99250 U8.20-201ENST00000459445 131 ntBASIC1.07□□□□□ -2.24
SCN2AQ99250 AC005908.1-201ENST00000468701 347 ntBASIC1.07□□□□□ -2.24
SCN2AQ99250 AP000870.1-201ENST00000472927 406 ntBASIC1.07□□□□□ -2.24
SCN2AQ99250 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.07□□□□□ -2.24
SCN2AQ99250 RNU6-970P-201ENST00000516312 107 ntBASIC1.07□□□□□ -2.24
SCN2AQ99250 SNORA40.14-201ENST00000516543 86 ntBASIC1.07□□□□□ -2.24
SCN2AQ99250 MIR4285-201ENST00000581001 85 ntBASIC1.07□□□□□ -2.24
SCN2AQ99250 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.07□□□□□ -2.24
SCN2AQ99250 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
SCN2AQ99250 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SCN2AQ99250 Y_RNA.36-201ENST00000362602 112 ntBASIC1.06□□□□□ -2.24
SCN2AQ99250 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.06□□□□□ -2.24
SCN2AQ99250 MIR758-201ENST00000390227 88 ntBASIC1.06□□□□□ -2.24
SCN2AQ99250 TOMM22P2-201ENST00000430735 237 ntBASIC1.06□□□□□ -2.24
SCN2AQ99250 AC093852.1-201ENST00000503587 266 ntBASIC1.06□□□□□ -2.24
SCN2AQ99250 RNU6-120P-201ENST00000516077 103 ntBASIC1.06□□□□□ -2.24
SCN2AQ99250 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.06□□□□□ -2.24
SCN2AQ99250 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.06□□□□□ -2.24
SCN2AQ99250 AC104985.2-201ENST00000620598 500 ntBASIC1.06□□□□□ -2.24
SCN2AQ99250 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.06□□□□□ -2.24
SCN2AQ99250 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.06□□□□□ -2.24
SCN2AQ99250 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.06□□□□□ -2.24
SCN2AQ99250 AC005592.1-201ENST00000566527 1640 ntBASIC1.06□□□□□ -2.24
SCN2AQ99250 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SCN2AQ99250 RNU6-490P-201ENST00000362985 107 ntBASIC1.06□□□□□ -2.24
SCN2AQ99250 Y_RNA.205-201ENST00000364128 113 ntBASIC1.06□□□□□ -2.24
SCN2AQ99250 Y_RNA.243-201ENST00000364481 109 ntBASIC1.06□□□□□ -2.24
SCN2AQ99250 SNORA75.6-201ENST00000391318 127 ntBASIC1.06□□□□□ -2.24
SCN2AQ99250 AC008134.1-201ENST00000420943 193 ntBASIC1.06□□□□□ -2.24
SCN2AQ99250 AC010154.1-201ENST00000425857 269 ntBASIC1.06□□□□□ -2.24
SCN2AQ99250 AL049830.1-201ENST00000468034 425 ntBASIC1.06□□□□□ -2.24
SCN2AQ99250 RNU6-436P-201ENST00000516171 114 ntBASIC1.06□□□□□ -2.24
SCN2AQ99250 AL929325.1-201ENST00000603096 117 ntBASIC1.06□□□□□ -2.24
SCN2AQ99250 MIR376A1-201ENST00000616574 68 ntBASIC1.06□□□□□ -2.24
SCN2AQ99250 U6.73-201ENST00000619194 103 ntBASIC1.06□□□□□ -2.24
SCN2AQ99250 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
SCN2AQ99250 AL160413.1-201ENST00000622780 310 ntBASIC1.06□□□□□ -2.24
SCN2AQ99250 U6.92-201ENST00000636464 89 ntBASIC1.06□□□□□ -2.24
SCN2AQ99250 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SCN2AQ99250 Y_RNA.445-201ENST00000384168 102 ntBASIC1.05□□□□□ -2.24
SCN2AQ99250 Y_RNA.446-201ENST00000384178 104 ntBASIC1.05□□□□□ -2.24
SCN2AQ99250 AL137792.2-201ENST00000443484 235 ntBASIC1.05□□□□□ -2.24
SCN2AQ99250 AC091951.2-201ENST00000500762 203 ntBASIC1.05□□□□□ -2.24
SCN2AQ99250 RNU7-99P-201ENST00000516271 62 ntBASIC1.05□□□□□ -2.24
SCN2AQ99250 SUMO2P16-201ENST00000519475 264 ntBASIC1.05□□□□□ -2.24
SCN2AQ99250 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.05□□□□□ -2.24
SCN2AQ99250 FAM106DP-201ENST00000586416 501 ntBASIC1.05□□□□□ -2.24
SCN2AQ99250 Y_RNA.80-201ENST00000362996 102 ntBASIC1.05□□□□□ -2.24
SCN2AQ99250 Y_RNA.106-201ENST00000363189 100 ntBASIC1.05□□□□□ -2.24
SCN2AQ99250 RNA5SP325-201ENST00000363756 130 ntBASIC1.05□□□□□ -2.24
SCN2AQ99250 Y_RNA.252-201ENST00000364556 101 ntBASIC1.05□□□□□ -2.24
SCN2AQ99250 RNU6-867P-201ENST00000364956 107 ntBASIC1.05□□□□□ -2.24
SCN2AQ99250 SNORA4.2-201ENST00000365313 147 ntBASIC1.05□□□□□ -2.24
SCN2AQ99250 RNU6-338P-201ENST00000383888 105 ntBASIC1.05□□□□□ -2.24
SCN2AQ99250 Y_RNA.485-201ENST00000384395 102 ntBASIC1.05□□□□□ -2.24
SCN2AQ99250 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.05□□□□□ -2.24
SCN2AQ99250 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.05□□□□□ -2.24
SCN2AQ99250 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.05□□□□□ -2.24
SCN2AQ99250 RNU7-169P-201ENST00000459456 61 ntBASIC1.05□□□□□ -2.24
SCN2AQ99250 SNORD111.1-201ENST00000516421 86 ntBASIC1.05□□□□□ -2.24
SCN2AQ99250 RNA5SP481-201ENST00000516814 122 ntBASIC1.05□□□□□ -2.24
SCN2AQ99250 MIR3684-201ENST00000579779 74 ntBASIC1.05□□□□□ -2.24
SCN2AQ99250 AP001094.1-201ENST00000579805 193 ntBASIC1.05□□□□□ -2.24
SCN2AQ99250 AL078603.1-201ENST00000603824 313 ntBASIC1.05□□□□□ -2.24
SCN2AQ99250 AC091925.1-201ENST00000623204 462 ntBASIC1.05□□□□□ -2.24
SCN2AQ99250 MIR4272-201ENST00000635924 64 ntBASIC1.05□□□□□ -2.24
SCN2AQ99250 MIR3674-201ENST00000636576 68 ntBASIC1.05□□□□□ -2.24
SCN2AQ99250 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
SCN2AQ99250 Y_RNA.67-201ENST00000362870 100 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 153.6 ms