Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC026271.5-201ENST00000577873 130 ntBASIC2.26□□□□□ -2.05
SNX18Q96RF0 AC004832.4-201ENST00000608952 331 ntBASIC2.26□□□□□ -2.05
SNX18Q96RF0 U4.3-201ENST00000621047 82 ntBASIC2.26□□□□□ -2.05
SNX18Q96RF0 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SNX18Q96RF0 ZNF720P1-201ENST00000562403 1939 ntBASIC2.25□□□□□ -2.05
SNX18Q96RF0 U8.7-201ENST00000364940 136 ntBASIC2.25□□□□□ -2.05
SNX18Q96RF0 MIR518C-201ENST00000384822 101 ntBASIC2.25□□□□□ -2.05
SNX18Q96RF0 MIR1253-201ENST00000408273 105 ntBASIC2.25□□□□□ -2.05
SNX18Q96RF0 AC060773.1-201ENST00000421698 310 ntBASIC2.25□□□□□ -2.05
SNX18Q96RF0 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.25□□□□□ -2.05
SNX18Q96RF0 AC245102.2-201ENST00000448956 180 ntBASIC2.25□□□□□ -2.05
SNX18Q96RF0 AC117454.1-201ENST00000491120 168 ntBASIC2.25□□□□□ -2.05
SNX18Q96RF0 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.25□□□□□ -2.05
SNX18Q96RF0 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.25□□□□□ -2.05
SNX18Q96RF0 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.25□□□□□ -2.05
SNX18Q96RF0 AC100767.1-201ENST00000528178 123 ntBASIC2.25□□□□□ -2.05
SNX18Q96RF0 MIR3126-201ENST00000577443 74 ntBASIC2.25□□□□□ -2.05
SNX18Q96RF0 MIR4658-201ENST00000584344 65 ntBASIC2.25□□□□□ -2.05
SNX18Q96RF0 MIR6817-201ENST00000615588 66 ntBASIC2.25□□□□□ -2.05
SNX18Q96RF0 AC006435.5-201ENST00000624486 112 ntBASIC2.25□□□□□ -2.05
SNX18Q96RF0 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SNX18Q96RF0 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SNX18Q96RF0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
SNX18Q96RF0 SNORD115-3-201ENST00000363100 82 ntBASIC2.24□□□□□ -2.05
SNX18Q96RF0 SNORD114-6-201ENST00000364393 72 ntBASIC2.24□□□□□ -2.05
SNX18Q96RF0 RNU4-17P-201ENST00000365598 141 ntBASIC2.24□□□□□ -2.05
SNX18Q96RF0 RNU1-148P-201ENST00000384472 162 ntBASIC2.24□□□□□ -2.05
SNX18Q96RF0 RNU6-160P-201ENST00000384591 107 ntBASIC2.24□□□□□ -2.05
SNX18Q96RF0 MIR27B-201ENST00000385129 97 ntBASIC2.24□□□□□ -2.05
SNX18Q96RF0 MIR524-201ENST00000385242 87 ntBASIC2.24□□□□□ -2.05
SNX18Q96RF0 SNORA40.19-201ENST00000390846 128 ntBASIC2.24□□□□□ -2.05
SNX18Q96RF0 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.24□□□□□ -2.05
SNX18Q96RF0 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.24□□□□□ -2.05
SNX18Q96RF0 HMGN2P34-201ENST00000437647 269 ntBASIC2.24□□□□□ -2.05
SNX18Q96RF0 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.24□□□□□ -2.05
SNX18Q96RF0 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.24□□□□□ -2.05
SNX18Q96RF0 SUMO2P18-201ENST00000518873 252 ntBASIC2.24□□□□□ -2.05
SNX18Q96RF0 MIR4438-201ENST00000585271 93 ntBASIC2.24□□□□□ -2.05
SNX18Q96RF0 AL365434.2-201ENST00000607979 234 ntBASIC2.24□□□□□ -2.05
SNX18Q96RF0 U2.15-201ENST00000611544 191 ntBASIC2.24□□□□□ -2.05
SNX18Q96RF0 U2.16-201ENST00000613119 191 ntBASIC2.24□□□□□ -2.05
SNX18Q96RF0 AC022202.1-201ENST00000613515 211 ntBASIC2.24□□□□□ -2.05
SNX18Q96RF0 U2.12-201ENST00000613778 191 ntBASIC2.24□□□□□ -2.05
SNX18Q96RF0 U2.20-201ENST00000613956 192 ntBASIC2.24□□□□□ -2.05
SNX18Q96RF0 U2.9-201ENST00000615427 191 ntBASIC2.24□□□□□ -2.05
SNX18Q96RF0 U2.11-201ENST00000616345 191 ntBASIC2.24□□□□□ -2.05
SNX18Q96RF0 U2.2-201ENST00000616535 191 ntBASIC2.24□□□□□ -2.05
SNX18Q96RF0 U2.3-201ENST00000617785 191 ntBASIC2.24□□□□□ -2.05
SNX18Q96RF0 U2.19-201ENST00000618602 191 ntBASIC2.24□□□□□ -2.05
SNX18Q96RF0 RNU2-1-201ENST00000618664 191 ntBASIC2.24□□□□□ -2.05
SNX18Q96RF0 U2.6-201ENST00000619225 191 ntBASIC2.24□□□□□ -2.05
SNX18Q96RF0 U2.5-201ENST00000619465 191 ntBASIC2.24□□□□□ -2.05
SNX18Q96RF0 U2.10-201ENST00000620268 191 ntBASIC2.24□□□□□ -2.05
SNX18Q96RF0 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.24□□□□□ -2.05
SNX18Q96RF0 MIR203B-201ENST00000636080 86 ntBASIC2.24□□□□□ -2.05
SNX18Q96RF0 AC016717.2-201ENST00000609089 5141 ntBASIC2.23□□□□□ -2.05
SNX18Q96RF0 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
SNX18Q96RF0 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SNX18Q96RF0 RNU6-1205P-201ENST00000363625 106 ntBASIC2.23□□□□□ -2.05
SNX18Q96RF0 RNA5SP68-201ENST00000363885 119 ntBASIC2.23□□□□□ -2.05
SNX18Q96RF0 RNU6-136P-201ENST00000384663 107 ntBASIC2.23□□□□□ -2.05
SNX18Q96RF0 Y_RNA.572-201ENST00000384757 98 ntBASIC2.23□□□□□ -2.05
SNX18Q96RF0 AL603908.1-201ENST00000406098 201 ntBASIC2.23□□□□□ -2.05
SNX18Q96RF0 AL355497.1-201ENST00000406262 551 ntBASIC2.23□□□□□ -2.05
SNX18Q96RF0 RNU2-2P-201ENST00000410396 191 ntBASIC2.23□□□□□ -2.05
SNX18Q96RF0 RNA5SP511-201ENST00000410487 115 ntBASIC2.23□□□□□ -2.05
SNX18Q96RF0 Y_RNA.662-201ENST00000516028 97 ntBASIC2.23□□□□□ -2.05
SNX18Q96RF0 RNU6-1219P-201ENST00000516143 112 ntBASIC2.23□□□□□ -2.05
SNX18Q96RF0 RNA5SP148-201ENST00000516527 94 ntBASIC2.23□□□□□ -2.05
SNX18Q96RF0 AC104984.5-201ENST00000586878 94 ntBASIC2.23□□□□□ -2.05
SNX18Q96RF0 RNU2-4P-201ENST00000606190 192 ntBASIC2.23□□□□□ -2.05
SNX18Q96RF0 MIR548AY-201ENST00000617669 107 ntBASIC2.23□□□□□ -2.05
SNX18Q96RF0 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
SNX18Q96RF0 ZNF658B-202ENST00000615961 3375 ntBASIC2.23□□□□□ -2.05
SNX18Q96RF0 CENPCP1-201ENST00000533085 2578 ntBASIC2.23□□□□□ -2.05
SNX18Q96RF0 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.22□□□□□ -2.05
SNX18Q96RF0 Y_RNA.24-201ENST00000362508 103 ntBASIC2.22□□□□□ -2.05
SNX18Q96RF0 RNU6-417P-201ENST00000384712 107 ntBASIC2.22□□□□□ -2.05
SNX18Q96RF0 Y_RNA.571-201ENST00000384753 98 ntBASIC2.22□□□□□ -2.05
SNX18Q96RF0 AL513328.1-201ENST00000446460 224 ntBASIC2.22□□□□□ -2.05
SNX18Q96RF0 AC008413.1-201ENST00000511864 177 ntBASIC2.22□□□□□ -2.05
SNX18Q96RF0 AC011406.1-201ENST00000512440 370 ntBASIC2.22□□□□□ -2.05
SNX18Q96RF0 RNU6-1041P-201ENST00000516254 102 ntBASIC2.22□□□□□ -2.05
SNX18Q96RF0 RNU6-1146P-201ENST00000516282 102 ntBASIC2.22□□□□□ -2.05
SNX18Q96RF0 RNU7-115P-201ENST00000516433 55 ntBASIC2.22□□□□□ -2.05
SNX18Q96RF0 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.22□□□□□ -2.05
SNX18Q96RF0 AC021269.2-201ENST00000532318 330 ntBASIC2.22□□□□□ -2.05
SNX18Q96RF0 POLR3GP1-201ENST00000594073 261 ntBASIC2.22□□□□□ -2.05
SNX18Q96RF0 AC005972.2-201ENST00000604690 348 ntBASIC2.22□□□□□ -2.05
SNX18Q96RF0 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
SNX18Q96RF0 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SNX18Q96RF0 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SNX18Q96RF0 Y_RNA.7-201ENST00000362352 102 ntBASIC2.21□□□□□ -2.06
SNX18Q96RF0 RNU1-22P-201ENST00000363334 158 ntBASIC2.21□□□□□ -2.06
SNX18Q96RF0 Y_RNA.238-201ENST00000364441 102 ntBASIC2.21□□□□□ -2.06
SNX18Q96RF0 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.21□□□□□ -2.06
SNX18Q96RF0 Y_RNA.435-201ENST00000384095 112 ntBASIC2.21□□□□□ -2.06
SNX18Q96RF0 SNORA8.3-201ENST00000384679 139 ntBASIC2.21□□□□□ -2.06
SNX18Q96RF0 AL135786.1-201ENST00000415892 214 ntBASIC2.21□□□□□ -2.06
SNX18Q96RF0 MTND2P29-201ENST00000438595 412 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms