Protein–RNA interactions for Protein: Q96P50

ACAP3, Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAP3Q96P50 MTND5P15-201ENST00000434246 349 ntBASIC2.57□□□□□ -2
ACAP3Q96P50 AC011753.1-201ENST00000451001 220 ntBASIC2.57□□□□□ -2
ACAP3Q96P50 SNORD2.1-201ENST00000458762 69 ntBASIC2.57□□□□□ -2
ACAP3Q96P50 AC097462.1-201ENST00000514125 324 ntBASIC2.57□□□□□ -2
ACAP3Q96P50 RNU7-172P-201ENST00000517125 64 ntBASIC2.57□□□□□ -2
ACAP3Q96P50 AC067747.1-201ENST00000608026 250 ntBASIC2.57□□□□□ -2
ACAP3Q96P50 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
ACAP3Q96P50 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.57□□□□□ -2
ACAP3Q96P50 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
ACAP3Q96P50 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
ACAP3Q96P50 Y_RNA.83-201ENST00000363005 113 ntBASIC2.56□□□□□ -2
ACAP3Q96P50 RNU1-22P-201ENST00000363334 158 ntBASIC2.56□□□□□ -2
ACAP3Q96P50 Y_RNA.274-201ENST00000364714 101 ntBASIC2.56□□□□□ -2
ACAP3Q96P50 RNU1-52P-201ENST00000384190 164 ntBASIC2.56□□□□□ -2
ACAP3Q96P50 RNA5SP467-201ENST00000391274 118 ntBASIC2.56□□□□□ -2
ACAP3Q96P50 Y_RNA.626-201ENST00000411288 95 ntBASIC2.56□□□□□ -2
ACAP3Q96P50 AL139156.1-201ENST00000412785 841 ntBASIC2.56□□□□□ -2
ACAP3Q96P50 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.56□□□□□ -2
ACAP3Q96P50 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.56□□□□□ -2
ACAP3Q96P50 RNU6-1278P-201ENST00000516130 107 ntBASIC2.56□□□□□ -2
ACAP3Q96P50 MIR3169-201ENST00000578032 83 ntBASIC2.56□□□□□ -2
ACAP3Q96P50 SNORD14A-201ENST00000606526 91 ntBASIC2.56□□□□□ -2
ACAP3Q96P50 AC004832.4-201ENST00000608952 331 ntBASIC2.56□□□□□ -2
ACAP3Q96P50 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.56□□□□□ -2
ACAP3Q96P50 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.56□□□□□ -2
ACAP3Q96P50 U6.73-201ENST00000619194 103 ntBASIC2.56□□□□□ -2
ACAP3Q96P50 MIR338-201ENST00000636369 67 ntBASIC2.56□□□□□ -2
ACAP3Q96P50 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ACAP3Q96P50 RNU1-58P-201ENST00000362413 163 ntBASIC2.55□□□□□ -2
ACAP3Q96P50 RNU4-13P-201ENST00000364019 141 ntBASIC2.55□□□□□ -2
ACAP3Q96P50 Y_RNA.297-201ENST00000364950 91 ntBASIC2.55□□□□□ -2
ACAP3Q96P50 RNY4P28-201ENST00000365281 93 ntBASIC2.55□□□□□ -2
ACAP3Q96P50 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.55□□□□□ -2
ACAP3Q96P50 RNU6-376P-201ENST00000384731 106 ntBASIC2.55□□□□□ -2
ACAP3Q96P50 MIR524-201ENST00000385242 87 ntBASIC2.55□□□□□ -2
ACAP3Q96P50 Z98742.3-201ENST00000418637 326 ntBASIC2.55□□□□□ -2
ACAP3Q96P50 RNU7-141P-201ENST00000459304 62 ntBASIC2.55□□□□□ -2
ACAP3Q96P50 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.55□□□□□ -2
ACAP3Q96P50 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.55□□□□□ -2
ACAP3Q96P50 RNA5SP281-201ENST00000516504 135 ntBASIC2.55□□□□□ -2
ACAP3Q96P50 RNA5SP137-201ENST00000516833 135 ntBASIC2.55□□□□□ -2
ACAP3Q96P50 AC007229.1-201ENST00000590455 412 ntBASIC2.55□□□□□ -2
ACAP3Q96P50 AL078604.3-201ENST00000615580 211 ntBASIC2.55□□□□□ -2
ACAP3Q96P50 ZNF658B-202ENST00000615961 3375 ntBASIC2.55□□□□□ -2
ACAP3Q96P50 RNU6-862P-201ENST00000362804 105 ntBASIC2.54□□□□□ -2
ACAP3Q96P50 Y_RNA.293-201ENST00000364908 93 ntBASIC2.54□□□□□ -2
ACAP3Q96P50 RNA5SP323-201ENST00000391094 133 ntBASIC2.54□□□□□ -2
ACAP3Q96P50 RNA5SP511-201ENST00000410487 115 ntBASIC2.54□□□□□ -2
ACAP3Q96P50 RNA5SP270-201ENST00000411361 118 ntBASIC2.54□□□□□ -2
ACAP3Q96P50 AC104332.1-201ENST00000440471 797 ntBASIC2.54□□□□□ -2
ACAP3Q96P50 AC117454.1-201ENST00000491120 168 ntBASIC2.54□□□□□ -2
ACAP3Q96P50 RPS29P21-201ENST00000496272 170 ntBASIC2.54□□□□□ -2
ACAP3Q96P50 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.54□□□□□ -2
ACAP3Q96P50 AC024405.2-202ENST00000532731 184 ntBASIC2.54□□□□□ -2
ACAP3Q96P50 AL137847.3-201ENST00000611521 109 ntBASIC2.54□□□□□ -2
ACAP3Q96P50 AC013791.1-201ENST00000616619 62 ntBASIC2.54□□□□□ -2
ACAP3Q96P50 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ACAP3Q96P50 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.54□□□□□ -2
ACAP3Q96P50 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
ACAP3Q96P50 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
ACAP3Q96P50 MIR21-201ENST00000362134 72 ntBASIC2.53□□□□□ -2
ACAP3Q96P50 RNA5SP432-201ENST00000362480 116 ntBASIC2.53□□□□□ -2
ACAP3Q96P50 SNORA33-201ENST00000363664 130 ntBASIC2.53□□□□□ -2
ACAP3Q96P50 RNU6-899P-201ENST00000363947 107 ntBASIC2.53□□□□□ -2
ACAP3Q96P50 RNU6-117P-201ENST00000365415 107 ntBASIC2.53□□□□□ -2
ACAP3Q96P50 MIR597-201ENST00000384968 97 ntBASIC2.53□□□□□ -2
ACAP3Q96P50 RNU11-3P-201ENST00000391111 133 ntBASIC2.53□□□□□ -2
ACAP3Q96P50 EBAG9P1-201ENST00000418955 543 ntBASIC2.53□□□□□ -2
ACAP3Q96P50 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.53□□□□□ -2
ACAP3Q96P50 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.53□□□□□ -2
ACAP3Q96P50 RNA5SP402-201ENST00000517148 110 ntBASIC2.53□□□□□ -2
ACAP3Q96P50 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.53□□□□□ -2
ACAP3Q96P50 MIR5692C2-201ENST00000577959 77 ntBASIC2.53□□□□□ -2
ACAP3Q96P50 MIR5007-201ENST00000583098 95 ntBASIC2.53□□□□□ -2
ACAP3Q96P50 AC073413.2-201ENST00000604332 360 ntBASIC2.53□□□□□ -2
ACAP3Q96P50 AC005972.2-201ENST00000604690 348 ntBASIC2.53□□□□□ -2
ACAP3Q96P50 AC011921.3-201ENST00000605540 361 ntBASIC2.53□□□□□ -2
ACAP3Q96P50 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.53□□□□□ -2
ACAP3Q96P50 AL353149.1-201ENST00000610667 244 ntBASIC2.53□□□□□ -2
ACAP3Q96P50 AL365265.1-201ENST00000621045 234 ntBASIC2.53□□□□□ -2
ACAP3Q96P50 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
ACAP3Q96P50 MIR411-201ENST00000362239 96 ntBASIC2.52□□□□□ -2.01
ACAP3Q96P50 U8.7-201ENST00000364940 136 ntBASIC2.52□□□□□ -2.01
ACAP3Q96P50 AL117342.1-201ENST00000404861 406 ntBASIC2.52□□□□□ -2.01
ACAP3Q96P50 AL135786.1-201ENST00000415892 214 ntBASIC2.52□□□□□ -2.01
ACAP3Q96P50 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.52□□□□□ -2.01
ACAP3Q96P50 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.52□□□□□ -2.01
ACAP3Q96P50 Z98949.2-201ENST00000440996 144 ntBASIC2.52□□□□□ -2.01
ACAP3Q96P50 RNY3P16-201ENST00000516338 101 ntBASIC2.52□□□□□ -2.01
ACAP3Q96P50 SNORA31.11-201ENST00000516528 139 ntBASIC2.52□□□□□ -2.01
ACAP3Q96P50 AC015720.1-201ENST00000565251 277 ntBASIC2.52□□□□□ -2.01
ACAP3Q96P50 AL359075.3-201ENST00000613288 217 ntBASIC2.52□□□□□ -2.01
ACAP3Q96P50 MIR6895-201ENST00000613497 78 ntBASIC2.52□□□□□ -2.01
ACAP3Q96P50 AC245884.12-201ENST00000615364 59 ntBASIC2.52□□□□□ -2.01
ACAP3Q96P50 MIR548AY-201ENST00000617669 107 ntBASIC2.52□□□□□ -2.01
ACAP3Q96P50 MIR203B-201ENST00000636080 86 ntBASIC2.52□□□□□ -2.01
ACAP3Q96P50 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
ACAP3Q96P50 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
ACAP3Q96P50 RNU6-1205P-201ENST00000363625 106 ntBASIC2.51□□□□□ -2.01
ACAP3Q96P50 RNU1-96P-201ENST00000364163 162 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms