Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 RNA5SP511-201ENST00000410487 115 ntBASIC0.95□□□□□ -2.26
NSMCE2Q96MF7 AL354751.2-201ENST00000415471 210 ntBASIC0.95□□□□□ -2.26
NSMCE2Q96MF7 MTND1P4-201ENST00000435196 415 ntBASIC0.95□□□□□ -2.26
NSMCE2Q96MF7 AC009474.2-201ENST00000451383 136 ntBASIC0.95□□□□□ -2.26
NSMCE2Q96MF7 RPS26P48-201ENST00000491713 339 ntBASIC0.95□□□□□ -2.26
NSMCE2Q96MF7 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.95□□□□□ -2.26
NSMCE2Q96MF7 CYCTP-201ENST00000504253 315 ntBASIC0.95□□□□□ -2.26
NSMCE2Q96MF7 RNU2-12P-201ENST00000517216 168 ntBASIC0.95□□□□□ -2.26
NSMCE2Q96MF7 AC023442.1-201ENST00000531247 422 ntBASIC0.95□□□□□ -2.26
NSMCE2Q96MF7 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.95□□□□□ -2.26
NSMCE2Q96MF7 AC120024.3-201ENST00000603167 156 ntBASIC0.95□□□□□ -2.26
NSMCE2Q96MF7 AC080078.3-201ENST00000605407 463 ntBASIC0.95□□□□□ -2.26
NSMCE2Q96MF7 AL020996.3-201ENST00000606617 222 ntBASIC0.95□□□□□ -2.26
NSMCE2Q96MF7 AC004832.4-201ENST00000608952 331 ntBASIC0.95□□□□□ -2.26
NSMCE2Q96MF7 AC004467.1-201ENST00000615678 330 ntBASIC0.95□□□□□ -2.26
NSMCE2Q96MF7 AL353770.2-201ENST00000620024 78 ntBASIC0.95□□□□□ -2.26
NSMCE2Q96MF7 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
NSMCE2Q96MF7 RNU1-17P-201ENST00000363022 152 ntBASIC0.94□□□□□ -2.26
NSMCE2Q96MF7 SNORD115-30-201ENST00000364117 82 ntBASIC0.94□□□□□ -2.26
NSMCE2Q96MF7 RNU6-1187P-201ENST00000364771 110 ntBASIC0.94□□□□□ -2.26
NSMCE2Q96MF7 SNORD114-24-201ENST00000365029 72 ntBASIC0.94□□□□□ -2.26
NSMCE2Q96MF7 RNU6-163P-201ENST00000384396 106 ntBASIC0.94□□□□□ -2.26
NSMCE2Q96MF7 MTND4P28-201ENST00000426217 387 ntBASIC0.94□□□□□ -2.26
NSMCE2Q96MF7 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.94□□□□□ -2.26
NSMCE2Q96MF7 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.94□□□□□ -2.26
NSMCE2Q96MF7 SNORD111.1-201ENST00000516421 86 ntBASIC0.94□□□□□ -2.26
NSMCE2Q96MF7 RNU6-1337P-201ENST00000516525 95 ntBASIC0.94□□□□□ -2.26
NSMCE2Q96MF7 AC136932.1-201ENST00000574771 208 ntBASIC0.94□□□□□ -2.26
NSMCE2Q96MF7 MIR3945-201ENST00000581853 98 ntBASIC0.94□□□□□ -2.26
NSMCE2Q96MF7 AL096861.1-201ENST00000610899 123 ntBASIC0.94□□□□□ -2.26
NSMCE2Q96MF7 AC027279.3-201ENST00000625055 122 ntBASIC0.94□□□□□ -2.26
NSMCE2Q96MF7 AC008163.1-202ENST00000636004 2889 ntBASIC0.93□□□□□ -2.26
NSMCE2Q96MF7 SNORD68-201ENST00000363214 84 ntBASIC0.93□□□□□ -2.26
NSMCE2Q96MF7 RNU6-961P-201ENST00000363893 105 ntBASIC0.93□□□□□ -2.26
NSMCE2Q96MF7 RNU6-969P-201ENST00000383900 105 ntBASIC0.93□□□□□ -2.26
NSMCE2Q96MF7 RNU6-1080P-201ENST00000383982 107 ntBASIC0.93□□□□□ -2.26
NSMCE2Q96MF7 MIR625-201ENST00000385047 85 ntBASIC0.93□□□□□ -2.26
NSMCE2Q96MF7 SNORA69.1-201ENST00000390904 137 ntBASIC0.93□□□□□ -2.26
NSMCE2Q96MF7 RNU4-14P-201ENST00000410858 122 ntBASIC0.93□□□□□ -2.26
NSMCE2Q96MF7 POLR2J4-204ENST00000418424 324 ntBASIC0.93□□□□□ -2.26
NSMCE2Q96MF7 PIGPP3-201ENST00000425307 415 ntBASIC0.93□□□□□ -2.26
NSMCE2Q96MF7 AL162725.1-201ENST00000435405 301 ntBASIC0.93□□□□□ -2.26
NSMCE2Q96MF7 RPL39P28-201ENST00000465655 155 ntBASIC0.93□□□□□ -2.26
NSMCE2Q96MF7 SNORA70.12-201ENST00000516084 153 ntBASIC0.93□□□□□ -2.26
NSMCE2Q96MF7 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.93□□□□□ -2.26
NSMCE2Q96MF7 AC068790.6-201ENST00000602558 258 ntBASIC0.93□□□□□ -2.26
NSMCE2Q96MF7 AC087588.2-201ENST00000617667 426 ntBASIC0.93□□□□□ -2.26
NSMCE2Q96MF7 RNU4-38P-201ENST00000364472 129 ntBASIC0.92□□□□□ -2.26
NSMCE2Q96MF7 Y_RNA.577-201ENST00000384794 101 ntBASIC0.92□□□□□ -2.26
NSMCE2Q96MF7 Y_RNA.592-201ENST00000410274 109 ntBASIC0.92□□□□□ -2.26
NSMCE2Q96MF7 Y_RNA.621-201ENST00000411065 96 ntBASIC0.92□□□□□ -2.26
NSMCE2Q96MF7 BTF3P4-201ENST00000418852 495 ntBASIC0.92□□□□□ -2.26
NSMCE2Q96MF7 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.92□□□□□ -2.26
NSMCE2Q96MF7 RPS4XP11-201ENST00000446897 772 ntBASIC0.92□□□□□ -2.26
NSMCE2Q96MF7 FGF7P6-202ENST00000451282 293 ntBASIC0.92□□□□□ -2.26
NSMCE2Q96MF7 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.92□□□□□ -2.26
NSMCE2Q96MF7 MTND4P17-201ENST00000470444 350 ntBASIC0.92□□□□□ -2.26
NSMCE2Q96MF7 RNU6-120P-201ENST00000516077 103 ntBASIC0.92□□□□□ -2.26
NSMCE2Q96MF7 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
NSMCE2Q96MF7 AC055872.1-201ENST00000570978 278 ntBASIC0.92□□□□□ -2.26
NSMCE2Q96MF7 PRELID3BP2-201ENST00000605362 201 ntBASIC0.92□□□□□ -2.26
NSMCE2Q96MF7 AL157834.3-201ENST00000615543 103 ntBASIC0.92□□□□□ -2.26
NSMCE2Q96MF7 AL008636.1-201ENST00000625038 1018 ntBASIC0.92□□□□□ -2.26
NSMCE2Q96MF7 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.92□□□□□ -2.26
NSMCE2Q96MF7 RNU6-845P-201ENST00000362578 103 ntBASIC0.91□□□□□ -2.26
NSMCE2Q96MF7 Y_RNA.336-201ENST00000365307 109 ntBASIC0.91□□□□□ -2.26
NSMCE2Q96MF7 RNU6-926P-201ENST00000384075 107 ntBASIC0.91□□□□□ -2.26
NSMCE2Q96MF7 RNU6-1105P-201ENST00000384774 107 ntBASIC0.91□□□□□ -2.26
NSMCE2Q96MF7 MIR200A-201ENST00000384875 90 ntBASIC0.91□□□□□ -2.26
NSMCE2Q96MF7 MIR1261-201ENST00000408659 82 ntBASIC0.91□□□□□ -2.26
NSMCE2Q96MF7 RNU4-62P-201ENST00000410125 130 ntBASIC0.91□□□□□ -2.26
NSMCE2Q96MF7 RNU6-1156P-201ENST00000410365 100 ntBASIC0.91□□□□□ -2.26
NSMCE2Q96MF7 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.91□□□□□ -2.26
NSMCE2Q96MF7 AC245047.8-201ENST00000456455 284 ntBASIC0.91□□□□□ -2.26
NSMCE2Q96MF7 RNU7-95P-201ENST00000459222 64 ntBASIC0.91□□□□□ -2.26
NSMCE2Q96MF7 RNU7-21P-201ENST00000459430 62 ntBASIC0.91□□□□□ -2.26
NSMCE2Q96MF7 AC114811.1-201ENST00000507207 168 ntBASIC0.91□□□□□ -2.26
NSMCE2Q96MF7 PDCD5P2-201ENST00000507570 312 ntBASIC0.91□□□□□ -2.26
NSMCE2Q96MF7 Y_RNA.691-201ENST00000516611 103 ntBASIC0.91□□□□□ -2.26
NSMCE2Q96MF7 RNU6-264P-201ENST00000517134 104 ntBASIC0.91□□□□□ -2.26
NSMCE2Q96MF7 AC006380.1-201ENST00000603598 186 ntBASIC0.91□□□□□ -2.26
NSMCE2Q96MF7 CASC19-280ENST00000642102 1351 ntBASIC0.91□□□□□ -2.26
NSMCE2Q96MF7 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
NSMCE2Q96MF7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.91□□□□□ -2.26
NSMCE2Q96MF7 RNU1-36P-201ENST00000365130 165 ntBASIC0.9□□□□□ -2.27
NSMCE2Q96MF7 SNORA75.2-201ENST00000391138 150 ntBASIC0.9□□□□□ -2.27
NSMCE2Q96MF7 SNORA75.3-201ENST00000391231 150 ntBASIC0.9□□□□□ -2.27
NSMCE2Q96MF7 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.9□□□□□ -2.27
NSMCE2Q96MF7 RPEP5-201ENST00000441137 268 ntBASIC0.9□□□□□ -2.27
NSMCE2Q96MF7 snoU13.25-201ENST00000458945 104 ntBASIC0.9□□□□□ -2.27
NSMCE2Q96MF7 Y_RNA.635-201ENST00000459041 101 ntBASIC0.9□□□□□ -2.27
NSMCE2Q96MF7 AC016727.1-205ENST00000605437 569 ntBASIC0.9□□□□□ -2.27
NSMCE2Q96MF7 AL391903.3-201ENST00000612158 163 ntBASIC0.9□□□□□ -2.27
NSMCE2Q96MF7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
NSMCE2Q96MF7 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.9□□□□□ -2.27
NSMCE2Q96MF7 AL591926.4-201ENST00000616895 298 ntBASIC0.9□□□□□ -2.27
NSMCE2Q96MF7 AC098679.4-201ENST00000624241 654 ntBASIC0.9□□□□□ -2.27
NSMCE2Q96MF7 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
NSMCE2Q96MF7 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
NSMCE2Q96MF7 Y_RNA.101-201ENST00000363154 102 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 187 ms