Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 MIR1273D-201ENST00000577266 86 ntBASIC2.37□□□□□ -2.03
CDK5RAP3Q96JB5 AC006006.1-201ENST00000603082 144 ntBASIC2.37□□□□□ -2.03
CDK5RAP3Q96JB5 U2.14-201ENST00000615943 113 ntBASIC2.37□□□□□ -2.03
CDK5RAP3Q96JB5 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CDK5RAP3Q96JB5 Y_RNA.44-201ENST00000362676 108 ntBASIC2.36□□□□□ -2.03
CDK5RAP3Q96JB5 Y_RNA.54-201ENST00000362766 105 ntBASIC2.36□□□□□ -2.03
CDK5RAP3Q96JB5 RNU1-22P-201ENST00000363334 158 ntBASIC2.36□□□□□ -2.03
CDK5RAP3Q96JB5 SNORA33-201ENST00000363664 130 ntBASIC2.36□□□□□ -2.03
CDK5RAP3Q96JB5 Y_RNA.172-201ENST00000363765 102 ntBASIC2.36□□□□□ -2.03
CDK5RAP3Q96JB5 Y_RNA.341-201ENST00000365341 102 ntBASIC2.36□□□□□ -2.03
CDK5RAP3Q96JB5 Y_RNA.447-201ENST00000384184 113 ntBASIC2.36□□□□□ -2.03
CDK5RAP3Q96JB5 RNA5SP323-201ENST00000391094 133 ntBASIC2.36□□□□□ -2.03
CDK5RAP3Q96JB5 MIR548H3-201ENST00000408771 118 ntBASIC2.36□□□□□ -2.03
CDK5RAP3Q96JB5 HMGN2P38-201ENST00000423806 265 ntBASIC2.36□□□□□ -2.03
CDK5RAP3Q96JB5 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.36□□□□□ -2.03
CDK5RAP3Q96JB5 CST2P1-201ENST00000425770 87 ntBASIC2.36□□□□□ -2.03
CDK5RAP3Q96JB5 MTND2P29-201ENST00000438595 412 ntBASIC2.36□□□□□ -2.03
CDK5RAP3Q96JB5 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.36□□□□□ -2.03
CDK5RAP3Q96JB5 HSPE1P13-201ENST00000451143 297 ntBASIC2.36□□□□□ -2.03
CDK5RAP3Q96JB5 AC097462.1-201ENST00000514125 324 ntBASIC2.36□□□□□ -2.03
CDK5RAP3Q96JB5 SNORA27.4-201ENST00000516650 95 ntBASIC2.36□□□□□ -2.03
CDK5RAP3Q96JB5 RNU6-63P-201ENST00000516690 95 ntBASIC2.36□□□□□ -2.03
CDK5RAP3Q96JB5 RNU7-172P-201ENST00000517125 64 ntBASIC2.36□□□□□ -2.03
CDK5RAP3Q96JB5 AC010900.2-201ENST00000604508 210 ntBASIC2.36□□□□□ -2.03
CDK5RAP3Q96JB5 AL359075.3-201ENST00000613288 217 ntBASIC2.36□□□□□ -2.03
CDK5RAP3Q96JB5 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.36□□□□□ -2.03
CDK5RAP3Q96JB5 Y_RNA.188-201ENST00000363952 111 ntBASIC2.35□□□□□ -2.03
CDK5RAP3Q96JB5 Y_RNA.352-201ENST00000365439 102 ntBASIC2.35□□□□□ -2.03
CDK5RAP3Q96JB5 RNU6-662P-201ENST00000384253 104 ntBASIC2.35□□□□□ -2.03
CDK5RAP3Q96JB5 MIR676-201ENST00000390702 67 ntBASIC2.35□□□□□ -2.03
CDK5RAP3Q96JB5 AL603910.2-201ENST00000407268 136 ntBASIC2.35□□□□□ -2.03
CDK5RAP3Q96JB5 EBAG9P1-201ENST00000418955 543 ntBASIC2.35□□□□□ -2.03
CDK5RAP3Q96JB5 AC010154.1-201ENST00000425857 269 ntBASIC2.35□□□□□ -2.03
CDK5RAP3Q96JB5 RNA5SP233-201ENST00000459153 113 ntBASIC2.35□□□□□ -2.03
CDK5RAP3Q96JB5 RNU1-142P-201ENST00000516682 145 ntBASIC2.35□□□□□ -2.03
CDK5RAP3Q96JB5 RNU6-1271P-201ENST00000517049 105 ntBASIC2.35□□□□□ -2.03
CDK5RAP3Q96JB5 MIR3128-201ENST00000581957 66 ntBASIC2.35□□□□□ -2.03
CDK5RAP3Q96JB5 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.35□□□□□ -2.03
CDK5RAP3Q96JB5 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.35□□□□□ -2.03
CDK5RAP3Q96JB5 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.35□□□□□ -2.03
CDK5RAP3Q96JB5 SNORD27-201ENST00000363981 72 ntBASIC2.34□□□□□ -2.03
CDK5RAP3Q96JB5 Y_RNA.277-201ENST00000364754 102 ntBASIC2.34□□□□□ -2.03
CDK5RAP3Q96JB5 Y_RNA.368-201ENST00000365547 113 ntBASIC2.34□□□□□ -2.03
CDK5RAP3Q96JB5 SNORD116-13-201ENST00000384408 92 ntBASIC2.34□□□□□ -2.03
CDK5RAP3Q96JB5 SNORA8-201ENST00000384574 139 ntBASIC2.34□□□□□ -2.03
CDK5RAP3Q96JB5 RNU6-136P-201ENST00000384663 107 ntBASIC2.34□□□□□ -2.03
CDK5RAP3Q96JB5 MIR515-2-201ENST00000384883 83 ntBASIC2.34□□□□□ -2.03
CDK5RAP3Q96JB5 MIR515-1-201ENST00000384884 83 ntBASIC2.34□□□□□ -2.03
CDK5RAP3Q96JB5 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CDK5RAP3Q96JB5 SNORA3.2-201ENST00000408221 125 ntBASIC2.34□□□□□ -2.03
CDK5RAP3Q96JB5 AL158823.1-201ENST00000418441 478 ntBASIC2.34□□□□□ -2.03
CDK5RAP3Q96JB5 AL135790.2-201ENST00000437701 267 ntBASIC2.34□□□□□ -2.03
CDK5RAP3Q96JB5 MTND1P19-201ENST00000511780 315 ntBASIC2.34□□□□□ -2.03
CDK5RAP3Q96JB5 RNU6-1278P-201ENST00000516130 107 ntBASIC2.34□□□□□ -2.03
CDK5RAP3Q96JB5 Y_RNA.673-201ENST00000516306 88 ntBASIC2.34□□□□□ -2.03
CDK5RAP3Q96JB5 Y_RNA.680-201ENST00000516441 93 ntBASIC2.34□□□□□ -2.03
CDK5RAP3Q96JB5 AC110588.1-201ENST00000559699 137 ntBASIC2.34□□□□□ -2.03
CDK5RAP3Q96JB5 MIR5094-201ENST00000578766 85 ntBASIC2.34□□□□□ -2.03
CDK5RAP3Q96JB5 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
CDK5RAP3Q96JB5 Y_RNA.310-201ENST00000365063 113 ntBASIC2.33□□□□□ -2.04
CDK5RAP3Q96JB5 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.33□□□□□ -2.04
CDK5RAP3Q96JB5 Y_RNA.416-201ENST00000384014 113 ntBASIC2.33□□□□□ -2.04
CDK5RAP3Q96JB5 RNU6-376P-201ENST00000384731 106 ntBASIC2.33□□□□□ -2.04
CDK5RAP3Q96JB5 RN7SKP223-201ENST00000410582 62 ntBASIC2.33□□□□□ -2.04
CDK5RAP3Q96JB5 OOSP1P1-201ENST00000423265 274 ntBASIC2.33□□□□□ -2.04
CDK5RAP3Q96JB5 RNU7-99P-201ENST00000516271 62 ntBASIC2.33□□□□□ -2.04
CDK5RAP3Q96JB5 RNVU1-2-201ENST00000516326 135 ntBASIC2.33□□□□□ -2.04
CDK5RAP3Q96JB5 RNU1-40P-201ENST00000516816 164 ntBASIC2.33□□□□□ -2.04
CDK5RAP3Q96JB5 RNU1-97P-201ENST00000516872 164 ntBASIC2.33□□□□□ -2.04
CDK5RAP3Q96JB5 MIR4299-201ENST00000577899 72 ntBASIC2.33□□□□□ -2.04
CDK5RAP3Q96JB5 AC002984.1-201ENST00000591692 448 ntBASIC2.33□□□□□ -2.04
CDK5RAP3Q96JB5 AC073413.2-201ENST00000604332 360 ntBASIC2.33□□□□□ -2.04
CDK5RAP3Q96JB5 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
CDK5RAP3Q96JB5 Y_RNA.60-201ENST00000362831 98 ntBASIC2.32□□□□□ -2.04
CDK5RAP3Q96JB5 Y_RNA.275-201ENST00000364726 110 ntBASIC2.32□□□□□ -2.04
CDK5RAP3Q96JB5 RNU6-740P-201ENST00000364734 105 ntBASIC2.32□□□□□ -2.04
CDK5RAP3Q96JB5 RNU6-117P-201ENST00000365415 107 ntBASIC2.32□□□□□ -2.04
CDK5RAP3Q96JB5 Y_RNA.456-201ENST00000384232 111 ntBASIC2.32□□□□□ -2.04
CDK5RAP3Q96JB5 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.32□□□□□ -2.04
CDK5RAP3Q96JB5 RNA5SP511-201ENST00000410487 115 ntBASIC2.32□□□□□ -2.04
CDK5RAP3Q96JB5 RNA5SP501-201ENST00000410990 112 ntBASIC2.32□□□□□ -2.04
CDK5RAP3Q96JB5 RPL23AP6-201ENST00000446637 472 ntBASIC2.32□□□□□ -2.04
CDK5RAP3Q96JB5 RPS20P10-201ENST00000451209 253 ntBASIC2.32□□□□□ -2.04
CDK5RAP3Q96JB5 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.32□□□□□ -2.04
CDK5RAP3Q96JB5 RPS29P21-201ENST00000496272 170 ntBASIC2.32□□□□□ -2.04
CDK5RAP3Q96JB5 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.32□□□□□ -2.04
CDK5RAP3Q96JB5 RNU7-128P-201ENST00000517247 62 ntBASIC2.32□□□□□ -2.04
CDK5RAP3Q96JB5 AC136628.3-201ENST00000521868 290 ntBASIC2.32□□□□□ -2.04
CDK5RAP3Q96JB5 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.32□□□□□ -2.04
CDK5RAP3Q96JB5 MIR5002-201ENST00000584713 97 ntBASIC2.32□□□□□ -2.04
CDK5RAP3Q96JB5 AL627230.6-201ENST00000611129 280 ntBASIC2.32□□□□□ -2.04
CDK5RAP3Q96JB5 U6.108-201ENST00000637764 58 ntBASIC2.32□□□□□ -2.04
CDK5RAP3Q96JB5 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
CDK5RAP3Q96JB5 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
CDK5RAP3Q96JB5 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.31□□□□□ -2.04
CDK5RAP3Q96JB5 UBE2WP1-201ENST00000362030 340 ntBASIC2.31□□□□□ -2.04
CDK5RAP3Q96JB5 Y_RNA.117-201ENST00000363294 101 ntBASIC2.31□□□□□ -2.04
CDK5RAP3Q96JB5 RNU6-801P-201ENST00000364087 105 ntBASIC2.31□□□□□ -2.04
CDK5RAP3Q96JB5 SNORA20.1-201ENST00000364790 130 ntBASIC2.31□□□□□ -2.04
CDK5RAP3Q96JB5 RNA5SP37-201ENST00000365420 130 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms