Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AL365265.1-201ENST00000621045 234 ntBASIC2.2□□□□□ -2.06
CTHRC1Q96CG8 MIR338-201ENST00000636369 67 ntBASIC2.2□□□□□ -2.06
CTHRC1Q96CG8 AC068647.2-201ENST00000637380 353 ntBASIC2.2□□□□□ -2.06
CTHRC1Q96CG8 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.2□□□□□ -2.06
CTHRC1Q96CG8 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.2□□□□□ -2.06
CTHRC1Q96CG8 AC134026.1-201ENST00000623249 2239 ntBASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 RNU1-22P-201ENST00000363334 158 ntBASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 Y_RNA.172-201ENST00000363765 102 ntBASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 Y_RNA.293-201ENST00000364908 93 ntBASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 Y_RNA.304-201ENST00000365011 112 ntBASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 RNU6-144P-201ENST00000383951 107 ntBASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 RNU6-376P-201ENST00000384731 106 ntBASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 MIR515-2-201ENST00000384883 83 ntBASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 MIR515-1-201ENST00000384884 83 ntBASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 MIR144-201ENST00000384886 86 ntBASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 RNA5SP181-201ENST00000410246 98 ntBASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 RNU6-1186P-201ENST00000410429 97 ntBASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 Y_RNA.793-201ENST00000411222 111 ntBASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 AC018634.1-201ENST00000437554 401 ntBASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 AL135790.2-201ENST00000437701 267 ntBASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 Y_RNA.644-201ENST00000459006 113 ntBASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 RN7SL429P-201ENST00000479090 223 ntBASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 RN7SL489P-201ENST00000486185 223 ntBASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 RN7SL327P-201ENST00000488659 223 ntBASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 Y_RNA.674-201ENST00000516362 113 ntBASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 RNA5SP24-201ENST00000516478 95 ntBASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 RNU1-142P-201ENST00000516682 145 ntBASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 RNU6-63P-201ENST00000516690 95 ntBASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 AC021269.2-201ENST00000532318 330 ntBASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 AC024405.2-202ENST00000532731 184 ntBASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 MIR4435-1-201ENST00000582552 80 ntBASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 AL359075.3-201ENST00000613288 217 ntBASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 RN7SL853P-201ENST00000617250 223 ntBASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.19□□□□□ -2.06
CTHRC1Q96CG8 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.18□□□□□ -2.06
CTHRC1Q96CG8 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.18□□□□□ -2.06
CTHRC1Q96CG8 RNA5SP289-201ENST00000362332 137 ntBASIC2.18□□□□□ -2.06
CTHRC1Q96CG8 RNU1-58P-201ENST00000362413 163 ntBASIC2.18□□□□□ -2.06
CTHRC1Q96CG8 RNU6-1205P-201ENST00000363625 106 ntBASIC2.18□□□□□ -2.06
CTHRC1Q96CG8 RNU6-1048P-201ENST00000364054 107 ntBASIC2.18□□□□□ -2.06
CTHRC1Q96CG8 RNU1-96P-201ENST00000364163 162 ntBASIC2.18□□□□□ -2.06
CTHRC1Q96CG8 SNORD114-30-201ENST00000364448 72 ntBASIC2.18□□□□□ -2.06
CTHRC1Q96CG8 Y_RNA.274-201ENST00000364714 101 ntBASIC2.18□□□□□ -2.06
CTHRC1Q96CG8 RNU6-1323P-201ENST00000384025 107 ntBASIC2.18□□□□□ -2.06
CTHRC1Q96CG8 SNORD116-13-201ENST00000384408 92 ntBASIC2.18□□□□□ -2.06
CTHRC1Q96CG8 RNA5SP323-201ENST00000391094 133 ntBASIC2.18□□□□□ -2.06
CTHRC1Q96CG8 AL355497.1-201ENST00000406262 551 ntBASIC2.18□□□□□ -2.06
CTHRC1Q96CG8 RNA5SP511-201ENST00000410487 115 ntBASIC2.18□□□□□ -2.06
CTHRC1Q96CG8 EBAG9P1-201ENST00000418955 543 ntBASIC2.18□□□□□ -2.06
CTHRC1Q96CG8 RNU7-141P-201ENST00000459304 62 ntBASIC2.18□□□□□ -2.06
CTHRC1Q96CG8 AC117454.1-201ENST00000491120 168 ntBASIC2.18□□□□□ -2.06
CTHRC1Q96CG8 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.18□□□□□ -2.06
CTHRC1Q96CG8 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.18□□□□□ -2.06
CTHRC1Q96CG8 RNU7-99P-201ENST00000516271 62 ntBASIC2.18□□□□□ -2.06
CTHRC1Q96CG8 RNA5SP402-201ENST00000517148 110 ntBASIC2.18□□□□□ -2.06
CTHRC1Q96CG8 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.18□□□□□ -2.06
CTHRC1Q96CG8 POLR3GP1-201ENST00000594073 261 ntBASIC2.18□□□□□ -2.06
CTHRC1Q96CG8 AC011921.3-201ENST00000605540 361 ntBASIC2.18□□□□□ -2.06
CTHRC1Q96CG8 AC004832.4-201ENST00000608952 331 ntBASIC2.18□□□□□ -2.06
CTHRC1Q96CG8 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.18□□□□□ -2.06
CTHRC1Q96CG8 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.18□□□□□ -2.06
CTHRC1Q96CG8 AL590808.1-201ENST00000618696 141 ntBASIC2.18□□□□□ -2.06
CTHRC1Q96CG8 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.18□□□□□ -2.06
CTHRC1Q96CG8 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CTHRC1Q96CG8 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CTHRC1Q96CG8 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CTHRC1Q96CG8 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.17□□□□□ -2.06
CTHRC1Q96CG8 AC131280.1-202ENST00000624067 4211 ntBASIC2.17□□□□□ -2.06
CTHRC1Q96CG8 U8.7-201ENST00000364940 136 ntBASIC2.17□□□□□ -2.06
CTHRC1Q96CG8 RNU6-136P-201ENST00000384663 107 ntBASIC2.17□□□□□ -2.06
CTHRC1Q96CG8 SNORA11.4-201ENST00000408823 129 ntBASIC2.17□□□□□ -2.06
CTHRC1Q96CG8 RNU2-64P-201ENST00000411315 191 ntBASIC2.17□□□□□ -2.06
CTHRC1Q96CG8 AC007064.1-201ENST00000412238 351 ntBASIC2.17□□□□□ -2.06
CTHRC1Q96CG8 CST2P1-201ENST00000425770 87 ntBASIC2.17□□□□□ -2.06
CTHRC1Q96CG8 AL162725.1-201ENST00000435405 301 ntBASIC2.17□□□□□ -2.06
CTHRC1Q96CG8 AC104332.1-201ENST00000440471 797 ntBASIC2.17□□□□□ -2.06
CTHRC1Q96CG8 YWHAEP4-201ENST00000505390 198 ntBASIC2.17□□□□□ -2.06
CTHRC1Q96CG8 RNU7-115P-201ENST00000516433 55 ntBASIC2.17□□□□□ -2.06
CTHRC1Q96CG8 AC091544.4-201ENST00000555268 342 ntBASIC2.17□□□□□ -2.06
CTHRC1Q96CG8 MIR3169-201ENST00000578032 83 ntBASIC2.17□□□□□ -2.06
CTHRC1Q96CG8 MIR6895-201ENST00000613497 78 ntBASIC2.17□□□□□ -2.06
CTHRC1Q96CG8 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CTHRC1Q96CG8 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.17□□□□□ -2.06
CTHRC1Q96CG8 RNU6-1020P-201ENST00000363684 107 ntBASIC2.16□□□□□ -2.06
CTHRC1Q96CG8 Y_RNA.308-201ENST00000365043 101 ntBASIC2.16□□□□□ -2.06
CTHRC1Q96CG8 RNU6-117P-201ENST00000365415 107 ntBASIC2.16□□□□□ -2.06
CTHRC1Q96CG8 SNORA80E-201ENST00000384744 137 ntBASIC2.16□□□□□ -2.06
CTHRC1Q96CG8 RNU11-3P-201ENST00000391111 133 ntBASIC2.16□□□□□ -2.06
CTHRC1Q96CG8 RNA5SP467-201ENST00000391274 118 ntBASIC2.16□□□□□ -2.06
CTHRC1Q96CG8 RNA5SP270-201ENST00000411361 118 ntBASIC2.16□□□□□ -2.06
CTHRC1Q96CG8 AL135786.1-201ENST00000415892 214 ntBASIC2.16□□□□□ -2.06
CTHRC1Q96CG8 AC011753.1-201ENST00000451001 220 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 189.9 ms