Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 MIR1244-1-201ENST00000612829 85 ntBASIC1.07□□□□□ -2.24
PTP4A1Q93096 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
PTP4A1Q93096 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.07□□□□□ -2.24
PTP4A1Q93096 AL157834.3-201ENST00000615543 103 ntBASIC1.07□□□□□ -2.24
PTP4A1Q93096 MIR1244-3-201ENST00000635744 85 ntBASIC1.07□□□□□ -2.24
PTP4A1Q93096 MIR1244-2-201ENST00000636449 85 ntBASIC1.07□□□□□ -2.24
PTP4A1Q93096 MIR1244-4-202ENST00000636813 85 ntBASIC1.07□□□□□ -2.24
PTP4A1Q93096 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
PTP4A1Q93096 RNU6-454P-201ENST00000364292 107 ntBASIC1.06□□□□□ -2.24
PTP4A1Q93096 RNU6-99P-201ENST00000364721 107 ntBASIC1.06□□□□□ -2.24
PTP4A1Q93096 RNU6-163P-201ENST00000384396 106 ntBASIC1.06□□□□□ -2.24
PTP4A1Q93096 MIR200A-201ENST00000384875 90 ntBASIC1.06□□□□□ -2.24
PTP4A1Q93096 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.06□□□□□ -2.24
PTP4A1Q93096 RNU7-4P-201ENST00000516961 62 ntBASIC1.06□□□□□ -2.24
PTP4A1Q93096 AC144568.1-201ENST00000520139 137 ntBASIC1.06□□□□□ -2.24
PTP4A1Q93096 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.06□□□□□ -2.24
PTP4A1Q93096 AC027279.3-201ENST00000625055 122 ntBASIC1.06□□□□□ -2.24
PTP4A1Q93096 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.06□□□□□ -2.24
PTP4A1Q93096 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
PTP4A1Q93096 AL391987.6-201ENST00000305671 199 ntBASIC1.05□□□□□ -2.24
PTP4A1Q93096 SNORD114-24-201ENST00000365029 72 ntBASIC1.05□□□□□ -2.24
PTP4A1Q93096 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.05□□□□□ -2.24
PTP4A1Q93096 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.05□□□□□ -2.24
PTP4A1Q93096 AC104332.1-201ENST00000440471 797 ntBASIC1.05□□□□□ -2.24
PTP4A1Q93096 ELOCP24-201ENST00000456370 334 ntBASIC1.05□□□□□ -2.24
PTP4A1Q93096 AL163540.1-201ENST00000485382 386 ntBASIC1.05□□□□□ -2.24
PTP4A1Q93096 RNU6-408P-201ENST00000515910 100 ntBASIC1.05□□□□□ -2.24
PTP4A1Q93096 SNORD79.1-201ENST00000516069 84 ntBASIC1.05□□□□□ -2.24
PTP4A1Q93096 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.05□□□□□ -2.24
PTP4A1Q93096 MIR5690-201ENST00000583739 73 ntBASIC1.05□□□□□ -2.24
PTP4A1Q93096 U6atac.1-201ENST00000616025 117 ntBASIC1.05□□□□□ -2.24
PTP4A1Q93096 AL669831.3-213ENST00000636676 183 ntBASIC1.05□□□□□ -2.24
PTP4A1Q93096 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.04□□□□□ -2.24
PTP4A1Q93096 Y_RNA.166-201ENST00000363730 102 ntBASIC1.04□□□□□ -2.24
PTP4A1Q93096 RNU4-41P-201ENST00000364426 143 ntBASIC1.04□□□□□ -2.24
PTP4A1Q93096 RNU6-136P-201ENST00000384663 107 ntBASIC1.04□□□□□ -2.24
PTP4A1Q93096 MIR452-201ENST00000385020 85 ntBASIC1.04□□□□□ -2.24
PTP4A1Q93096 Y_RNA.621-201ENST00000411065 96 ntBASIC1.04□□□□□ -2.24
PTP4A1Q93096 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.04□□□□□ -2.24
PTP4A1Q93096 AL591704.2-201ENST00000421658 181 ntBASIC1.04□□□□□ -2.24
PTP4A1Q93096 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.04□□□□□ -2.24
PTP4A1Q93096 FCF1P4-201ENST00000448326 183 ntBASIC1.04□□□□□ -2.24
PTP4A1Q93096 FGF7P6-202ENST00000451282 293 ntBASIC1.04□□□□□ -2.24
PTP4A1Q93096 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.04□□□□□ -2.24
PTP4A1Q93096 U8.19-201ENST00000459095 133 ntBASIC1.04□□□□□ -2.24
PTP4A1Q93096 AC069439.1-201ENST00000494739 167 ntBASIC1.04□□□□□ -2.24
PTP4A1Q93096 AC022616.4-201ENST00000522985 181 ntBASIC1.04□□□□□ -2.24
PTP4A1Q93096 AP002001.1-203ENST00000534002 267 ntBASIC1.04□□□□□ -2.24
PTP4A1Q93096 AL117336.2-201ENST00000602435 335 ntBASIC1.04□□□□□ -2.24
PTP4A1Q93096 AC120024.3-201ENST00000603167 156 ntBASIC1.04□□□□□ -2.24
PTP4A1Q93096 AC080078.2-201ENST00000603766 501 ntBASIC1.04□□□□□ -2.24
PTP4A1Q93096 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.04□□□□□ -2.24
PTP4A1Q93096 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
PTP4A1Q93096 MIRLET7C-201ENST00000362160 84 ntBASIC1.03□□□□□ -2.24
PTP4A1Q93096 RNU6-845P-201ENST00000362578 103 ntBASIC1.03□□□□□ -2.24
PTP4A1Q93096 Y_RNA.124-201ENST00000363339 93 ntBASIC1.03□□□□□ -2.24
PTP4A1Q93096 SNORA22-201ENST00000383907 134 ntBASIC1.03□□□□□ -2.24
PTP4A1Q93096 SNORA22C-201ENST00000384614 134 ntBASIC1.03□□□□□ -2.24
PTP4A1Q93096 FGF7P8-201ENST00000402994 292 ntBASIC1.03□□□□□ -2.24
PTP4A1Q93096 POLR2J4-204ENST00000418424 324 ntBASIC1.03□□□□□ -2.24
PTP4A1Q93096 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.03□□□□□ -2.24
PTP4A1Q93096 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.03□□□□□ -2.24
PTP4A1Q93096 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.03□□□□□ -2.24
PTP4A1Q93096 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.03□□□□□ -2.24
PTP4A1Q93096 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.03□□□□□ -2.24
PTP4A1Q93096 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.03□□□□□ -2.24
PTP4A1Q93096 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.03□□□□□ -2.24
PTP4A1Q93096 FAM106DP-201ENST00000586416 501 ntBASIC1.03□□□□□ -2.24
PTP4A1Q93096 AC004467.1-201ENST00000615678 330 ntBASIC1.03□□□□□ -2.24
PTP4A1Q93096 AC139792.2-201ENST00000624218 587 ntBASIC1.03□□□□□ -2.24
PTP4A1Q93096 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.25
PTP4A1Q93096 SNORD68-201ENST00000363214 84 ntBASIC1.02□□□□□ -2.25
PTP4A1Q93096 RNU6-192P-201ENST00000391253 100 ntBASIC1.02□□□□□ -2.25
PTP4A1Q93096 MRPS18CP6-201ENST00000423587 223 ntBASIC1.02□□□□□ -2.25
PTP4A1Q93096 MTND1P4-201ENST00000435196 415 ntBASIC1.02□□□□□ -2.25
PTP4A1Q93096 AL162725.1-201ENST00000435405 301 ntBASIC1.02□□□□□ -2.25
PTP4A1Q93096 AC002429.1-201ENST00000437672 148 ntBASIC1.02□□□□□ -2.25
PTP4A1Q93096 Z98949.2-201ENST00000440996 144 ntBASIC1.02□□□□□ -2.25
PTP4A1Q93096 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.02□□□□□ -2.25
PTP4A1Q93096 SNORD111.1-201ENST00000516421 86 ntBASIC1.02□□□□□ -2.25
PTP4A1Q93096 AC023442.1-201ENST00000531247 422 ntBASIC1.02□□□□□ -2.25
PTP4A1Q93096 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.02□□□□□ -2.25
PTP4A1Q93096 snoU13.31-201ENST00000607291 104 ntBASIC1.02□□□□□ -2.25
PTP4A1Q93096 AC133104.2-201ENST00000615272 193 ntBASIC1.02□□□□□ -2.25
PTP4A1Q93096 AC098679.4-201ENST00000624241 654 ntBASIC1.02□□□□□ -2.25
PTP4A1Q93096 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
PTP4A1Q93096 Y_RNA.592-201ENST00000410274 109 ntBASIC1.01□□□□□ -2.25
PTP4A1Q93096 RNU6-1156P-201ENST00000410365 100 ntBASIC1.01□□□□□ -2.25
PTP4A1Q93096 AL354751.2-201ENST00000415471 210 ntBASIC1.01□□□□□ -2.25
PTP4A1Q93096 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.01□□□□□ -2.25
PTP4A1Q93096 AC092473.1-201ENST00000441098 221 ntBASIC1.01□□□□□ -2.25
PTP4A1Q93096 RPS29P28-201ENST00000446439 141 ntBASIC1.01□□□□□ -2.25
PTP4A1Q93096 AC093852.1-201ENST00000503587 266 ntBASIC1.01□□□□□ -2.25
PTP4A1Q93096 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.01□□□□□ -2.25
PTP4A1Q93096 PRDX4P1-201ENST00000507189 574 ntBASIC1.01□□□□□ -2.25
PTP4A1Q93096 Y_RNA.691-201ENST00000516611 103 ntBASIC1.01□□□□□ -2.25
PTP4A1Q93096 RNU2-12P-201ENST00000517216 168 ntBASIC1.01□□□□□ -2.25
PTP4A1Q93096 AC004832.4-201ENST00000608952 331 ntBASIC1.01□□□□□ -2.25
PTP4A1Q93096 MIR6078-201ENST00000611069 100 ntBASIC1.01□□□□□ -2.25
PTP4A1Q93096 AC084782.3-201ENST00000612282 578 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms