Protein–RNA interactions for Protein: Q92890

UFD1, Ubiquitin recognition factor in ER-associated degradation protein 1, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1Q92890 AC084782.3-201ENST00000612282 578 ntBASIC0.82□□□□□ -2.28
UFD1Q92890 MIR6715A-201ENST00000615929 79 ntBASIC0.82□□□□□ -2.28
UFD1Q92890 RNU6-833P-201ENST00000363486 107 ntBASIC0.81□□□□□ -2.28
UFD1Q92890 Y_RNA.361-201ENST00000365515 120 ntBASIC0.81□□□□□ -2.28
UFD1Q92890 SNORA80D-201ENST00000384488 135 ntBASIC0.81□□□□□ -2.28
UFD1Q92890 MIR526A1-201ENST00000384897 85 ntBASIC0.81□□□□□ -2.28
UFD1Q92890 MIR146A-201ENST00000385201 99 ntBASIC0.81□□□□□ -2.28
UFD1Q92890 MIR891A-201ENST00000401237 79 ntBASIC0.81□□□□□ -2.28
UFD1Q92890 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.81□□□□□ -2.28
UFD1Q92890 AC114482.1-201ENST00000418010 247 ntBASIC0.81□□□□□ -2.28
UFD1Q92890 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.81□□□□□ -2.28
UFD1Q92890 LINC01399-202ENST00000458450 244 ntBASIC0.81□□□□□ -2.28
UFD1Q92890 MIR2053-201ENST00000459295 91 ntBASIC0.81□□□□□ -2.28
UFD1Q92890 SNORD124-201ENST00000459577 104 ntBASIC0.81□□□□□ -2.28
UFD1Q92890 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.81□□□□□ -2.28
UFD1Q92890 RNU7-30P-201ENST00000516835 62 ntBASIC0.81□□□□□ -2.28
UFD1Q92890 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.81□□□□□ -2.28
UFD1Q92890 MIR4661-201ENST00000582720 75 ntBASIC0.81□□□□□ -2.28
UFD1Q92890 AC013244.2-201ENST00000603396 103 ntBASIC0.81□□□□□ -2.28
UFD1Q92890 AL020996.3-201ENST00000606617 222 ntBASIC0.81□□□□□ -2.28
UFD1Q92890 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.81□□□□□ -2.28
UFD1Q92890 SNORD114-2-201ENST00000363953 78 ntBASIC0.8□□□□□ -2.28
UFD1Q92890 RNU6-99P-201ENST00000364721 107 ntBASIC0.8□□□□□ -2.28
UFD1Q92890 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.8□□□□□ -2.28
UFD1Q92890 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
UFD1Q92890 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.8□□□□□ -2.28
UFD1Q92890 ELOCP24-201ENST00000456370 334 ntBASIC0.8□□□□□ -2.28
UFD1Q92890 RNU7-95P-201ENST00000459222 64 ntBASIC0.8□□□□□ -2.28
UFD1Q92890 RPS26P48-201ENST00000491713 339 ntBASIC0.8□□□□□ -2.28
UFD1Q92890 CYCTP-201ENST00000504253 315 ntBASIC0.8□□□□□ -2.28
UFD1Q92890 RNU6-408P-201ENST00000515910 100 ntBASIC0.8□□□□□ -2.28
UFD1Q92890 SNORD111.1-201ENST00000516421 86 ntBASIC0.8□□□□□ -2.28
UFD1Q92890 AC023442.1-201ENST00000531247 422 ntBASIC0.8□□□□□ -2.28
UFD1Q92890 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.8□□□□□ -2.28
UFD1Q92890 AC136932.1-201ENST00000574771 208 ntBASIC0.8□□□□□ -2.28
UFD1Q92890 FAM106DP-201ENST00000586416 501 ntBASIC0.8□□□□□ -2.28
UFD1Q92890 AC104984.5-201ENST00000586878 94 ntBASIC0.8□□□□□ -2.28
UFD1Q92890 AC120024.3-201ENST00000603167 156 ntBASIC0.8□□□□□ -2.28
UFD1Q92890 AC080078.3-201ENST00000605407 463 ntBASIC0.8□□□□□ -2.28
UFD1Q92890 AC004832.4-201ENST00000608952 331 ntBASIC0.8□□□□□ -2.28
UFD1Q92890 MIR6078-201ENST00000611069 100 ntBASIC0.8□□□□□ -2.28
UFD1Q92890 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.8□□□□□ -2.28
UFD1Q92890 AL669831.3-213ENST00000636676 183 ntBASIC0.8□□□□□ -2.28
UFD1Q92890 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.8□□□□□ -2.28
UFD1Q92890 SNORD115-30-201ENST00000364117 82 ntBASIC0.79□□□□□ -2.28
UFD1Q92890 SNORD114-24-201ENST00000365029 72 ntBASIC0.79□□□□□ -2.28
UFD1Q92890 RNU6-969P-201ENST00000383900 105 ntBASIC0.79□□□□□ -2.28
UFD1Q92890 SNORA17.3-201ENST00000391159 129 ntBASIC0.79□□□□□ -2.28
UFD1Q92890 FCF1P9-201ENST00000412546 282 ntBASIC0.79□□□□□ -2.28
UFD1Q92890 AL354751.2-201ENST00000415471 210 ntBASIC0.79□□□□□ -2.28
UFD1Q92890 POLR2J4-204ENST00000418424 324 ntBASIC0.79□□□□□ -2.28
UFD1Q92890 BTF3P4-201ENST00000418852 495 ntBASIC0.79□□□□□ -2.28
UFD1Q92890 AC108667.1-201ENST00000428618 249 ntBASIC0.79□□□□□ -2.28
UFD1Q92890 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.79□□□□□ -2.28
UFD1Q92890 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.79□□□□□ -2.28
UFD1Q92890 RNU6-1213P-201ENST00000517075 94 ntBASIC0.79□□□□□ -2.28
UFD1Q92890 RNU2-12P-201ENST00000517216 168 ntBASIC0.79□□□□□ -2.28
UFD1Q92890 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.79□□□□□ -2.28
UFD1Q92890 MIR4524B-201ENST00000581569 115 ntBASIC0.79□□□□□ -2.28
UFD1Q92890 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.79□□□□□ -2.28
UFD1Q92890 AL096861.1-201ENST00000610899 123 ntBASIC0.79□□□□□ -2.28
UFD1Q92890 AC004467.1-201ENST00000615678 330 ntBASIC0.79□□□□□ -2.28
UFD1Q92890 AC027279.3-201ENST00000625055 122 ntBASIC0.79□□□□□ -2.28
UFD1Q92890 MIR378A-201ENST00000362177 66 ntBASIC0.78□□□□□ -2.28
UFD1Q92890 RNU6-767P-201ENST00000384132 107 ntBASIC0.78□□□□□ -2.28
UFD1Q92890 RNU6-163P-201ENST00000384396 106 ntBASIC0.78□□□□□ -2.28
UFD1Q92890 MIR200A-201ENST00000384875 90 ntBASIC0.78□□□□□ -2.28
UFD1Q92890 RNA5SP511-201ENST00000410487 115 ntBASIC0.78□□□□□ -2.28
UFD1Q92890 PIGPP3-201ENST00000425307 415 ntBASIC0.78□□□□□ -2.28
UFD1Q92890 MTND4P28-201ENST00000426217 387 ntBASIC0.78□□□□□ -2.28
UFD1Q92890 MTND1P4-201ENST00000435196 415 ntBASIC0.78□□□□□ -2.28
UFD1Q92890 AL162725.1-201ENST00000435405 301 ntBASIC0.78□□□□□ -2.28
UFD1Q92890 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.78□□□□□ -2.28
UFD1Q92890 RNU6-1337P-201ENST00000516525 95 ntBASIC0.78□□□□□ -2.28
UFD1Q92890 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
UFD1Q92890 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.28
UFD1Q92890 AC008163.1-202ENST00000636004 2889 ntBASIC0.78□□□□□ -2.29
UFD1Q92890 SNORD68-201ENST00000363214 84 ntBASIC0.77□□□□□ -2.29
UFD1Q92890 RNU6-961P-201ENST00000363893 105 ntBASIC0.77□□□□□ -2.29
UFD1Q92890 RNU1-36P-201ENST00000365130 165 ntBASIC0.77□□□□□ -2.29
UFD1Q92890 Y_RNA.336-201ENST00000365307 109 ntBASIC0.77□□□□□ -2.29
UFD1Q92890 MIR625-201ENST00000385047 85 ntBASIC0.77□□□□□ -2.29
UFD1Q92890 SNORA69.1-201ENST00000390904 137 ntBASIC0.77□□□□□ -2.29
UFD1Q92890 RNU4-14P-201ENST00000410858 122 ntBASIC0.77□□□□□ -2.29
UFD1Q92890 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.77□□□□□ -2.29
UFD1Q92890 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.77□□□□□ -2.29
UFD1Q92890 RPS4XP11-201ENST00000446897 772 ntBASIC0.77□□□□□ -2.29
UFD1Q92890 AC245047.8-201ENST00000456455 284 ntBASIC0.77□□□□□ -2.29
UFD1Q92890 RNU7-21P-201ENST00000459430 62 ntBASIC0.77□□□□□ -2.29
UFD1Q92890 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.77□□□□□ -2.29
UFD1Q92890 PDCD5P2-201ENST00000507570 312 ntBASIC0.77□□□□□ -2.29
UFD1Q92890 SNORA70.12-201ENST00000516084 153 ntBASIC0.77□□□□□ -2.29
UFD1Q92890 AC055872.1-201ENST00000570978 278 ntBASIC0.77□□□□□ -2.29
UFD1Q92890 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.77□□□□□ -2.29
UFD1Q92890 PRELID3BP2-201ENST00000605362 201 ntBASIC0.77□□□□□ -2.29
UFD1Q92890 AL391903.3-201ENST00000612158 163 ntBASIC0.77□□□□□ -2.29
UFD1Q92890 AC087588.2-201ENST00000617667 426 ntBASIC0.77□□□□□ -2.29
UFD1Q92890 AL008636.1-201ENST00000625038 1018 ntBASIC0.77□□□□□ -2.29
UFD1Q92890 AC027514.1-201ENST00000588561 1603 ntBASIC0.77□□□□□ -2.29
UFD1Q92890 RNU6-1080P-201ENST00000383982 107 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 1677.9 ms