Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC091959.1-201ENST00000495857 238 ntBASIC2.03□□□□□ -2.08
SNED1Q8TER0 SNORA31.16-201ENST00000516773 139 ntBASIC2.03□□□□□ -2.08
SNED1Q8TER0 RNU6-255P-201ENST00000516957 105 ntBASIC2.03□□□□□ -2.08
SNED1Q8TER0 CYCSP23-201ENST00000519781 313 ntBASIC2.03□□□□□ -2.08
SNED1Q8TER0 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.03□□□□□ -2.08
SNED1Q8TER0 CYCSP26-201ENST00000534107 320 ntBASIC2.03□□□□□ -2.08
SNED1Q8TER0 AC090897.2-201ENST00000581715 130 ntBASIC2.03□□□□□ -2.08
SNED1Q8TER0 MIR3935-201ENST00000583472 104 ntBASIC2.03□□□□□ -2.08
SNED1Q8TER0 MIR4282-201ENST00000583613 67 ntBASIC2.03□□□□□ -2.08
SNED1Q8TER0 AC078899.2-201ENST00000595282 212 ntBASIC2.03□□□□□ -2.08
SNED1Q8TER0 AL078605.1-201ENST00000603529 500 ntBASIC2.03□□□□□ -2.08
SNED1Q8TER0 MZT1P2-201ENST00000604387 248 ntBASIC2.03□□□□□ -2.08
SNED1Q8TER0 AC005828.6-201ENST00000606610 232 ntBASIC2.03□□□□□ -2.08
SNED1Q8TER0 AL357075.2-201ENST00000614906 189 ntBASIC2.03□□□□□ -2.08
SNED1Q8TER0 MIR6779-201ENST00000617283 64 ntBASIC2.03□□□□□ -2.08
SNED1Q8TER0 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.03□□□□□ -2.08
SNED1Q8TER0 AC012640.5-201ENST00000623897 319 ntBASIC2.03□□□□□ -2.08
SNED1Q8TER0 MTND5P35-201ENST00000557537 1720 ntBASIC2.03□□□□□ -2.08
SNED1Q8TER0 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.03□□□□□ -2.09
SNED1Q8TER0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
SNED1Q8TER0 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
SNED1Q8TER0 UBE2WP1-201ENST00000362030 340 ntBASIC2.02□□□□□ -2.09
SNED1Q8TER0 MIR549A-201ENST00000385268 96 ntBASIC2.02□□□□□ -2.09
SNED1Q8TER0 SNORD23.1-201ENST00000408212 104 ntBASIC2.02□□□□□ -2.09
SNED1Q8TER0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.02□□□□□ -2.09
SNED1Q8TER0 RPL36AP48-201ENST00000485521 314 ntBASIC2.02□□□□□ -2.09
SNED1Q8TER0 AC074198.2-201ENST00000508153 258 ntBASIC2.02□□□□□ -2.09
SNED1Q8TER0 Y_RNA.662-201ENST00000516028 97 ntBASIC2.02□□□□□ -2.09
SNED1Q8TER0 Y_RNA.683-201ENST00000516508 93 ntBASIC2.02□□□□□ -2.09
SNED1Q8TER0 AC115990.1-201ENST00000526957 301 ntBASIC2.02□□□□□ -2.09
SNED1Q8TER0 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.02□□□□□ -2.09
SNED1Q8TER0 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.02□□□□□ -2.09
SNED1Q8TER0 AC233702.2-202ENST00000562547 291 ntBASIC2.02□□□□□ -2.09
SNED1Q8TER0 MIR4419B-201ENST00000577260 68 ntBASIC2.02□□□□□ -2.09
SNED1Q8TER0 MIR3910-1-201ENST00000580936 111 ntBASIC2.02□□□□□ -2.09
SNED1Q8TER0 AC072026.1-201ENST00000605023 201 ntBASIC2.02□□□□□ -2.09
SNED1Q8TER0 AC022441.3-201ENST00000605737 136 ntBASIC2.02□□□□□ -2.09
SNED1Q8TER0 SNORD14A-201ENST00000606526 91 ntBASIC2.02□□□□□ -2.09
SNED1Q8TER0 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.02□□□□□ -2.09
SNED1Q8TER0 Y_RNA.82-201ENST00000363000 102 ntBASIC2.01□□□□□ -2.09
SNED1Q8TER0 Y_RNA.92-201ENST00000363043 102 ntBASIC2.01□□□□□ -2.09
SNED1Q8TER0 Y_RNA.136-201ENST00000363444 102 ntBASIC2.01□□□□□ -2.09
SNED1Q8TER0 SNORA3A-201ENST00000364113 130 ntBASIC2.01□□□□□ -2.09
SNED1Q8TER0 Y_RNA.235-201ENST00000364412 102 ntBASIC2.01□□□□□ -2.09
SNED1Q8TER0 RNU4-56P-201ENST00000364700 142 ntBASIC2.01□□□□□ -2.09
SNED1Q8TER0 SNORD48-201ENST00000364953 64 ntBASIC2.01□□□□□ -2.09
SNED1Q8TER0 Y_RNA.306-201ENST00000365015 102 ntBASIC2.01□□□□□ -2.09
SNED1Q8TER0 Y_RNA.312-201ENST00000365089 102 ntBASIC2.01□□□□□ -2.09
SNED1Q8TER0 Y_RNA.322-201ENST00000365151 102 ntBASIC2.01□□□□□ -2.09
SNED1Q8TER0 RNU6-487P-201ENST00000365430 104 ntBASIC2.01□□□□□ -2.09
SNED1Q8TER0 Y_RNA.506-201ENST00000384494 102 ntBASIC2.01□□□□□ -2.09
SNED1Q8TER0 SNORA46.1-201ENST00000391069 153 ntBASIC2.01□□□□□ -2.09
SNED1Q8TER0 AL133475.1-201ENST00000404414 305 ntBASIC2.01□□□□□ -2.09
SNED1Q8TER0 AC097463.2-201ENST00000421074 142 ntBASIC2.01□□□□□ -2.09
SNED1Q8TER0 AC024067.1-201ENST00000426199 223 ntBASIC2.01□□□□□ -2.09
SNED1Q8TER0 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.01□□□□□ -2.09
SNED1Q8TER0 UQCRBP2-201ENST00000447827 297 ntBASIC2.01□□□□□ -2.09
SNED1Q8TER0 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.01□□□□□ -2.09
SNED1Q8TER0 AC007395.1-201ENST00000451333 677 ntBASIC2.01□□□□□ -2.09
SNED1Q8TER0 AC005042.3-201ENST00000453230 174 ntBASIC2.01□□□□□ -2.09
SNED1Q8TER0 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.01□□□□□ -2.09
SNED1Q8TER0 CYP2C59P-201ENST00000457790 269 ntBASIC2.01□□□□□ -2.09
SNED1Q8TER0 Y_RNA.650-201ENST00000459002 102 ntBASIC2.01□□□□□ -2.09
SNED1Q8TER0 RNU6-625P-201ENST00000459412 107 ntBASIC2.01□□□□□ -2.09
SNED1Q8TER0 AC074133.1-201ENST00000515696 183 ntBASIC2.01□□□□□ -2.09
SNED1Q8TER0 RNU6-1278P-201ENST00000516130 107 ntBASIC2.01□□□□□ -2.09
SNED1Q8TER0 RNY3P16-201ENST00000516338 101 ntBASIC2.01□□□□□ -2.09
SNED1Q8TER0 Y_RNA.703-201ENST00000516846 111 ntBASIC2.01□□□□□ -2.09
SNED1Q8TER0 Y_RNA.777-201ENST00000516982 102 ntBASIC2.01□□□□□ -2.09
SNED1Q8TER0 RNU6-1212P-201ENST00000517023 104 ntBASIC2.01□□□□□ -2.09
SNED1Q8TER0 AC018448.1-201ENST00000552843 316 ntBASIC2.01□□□□□ -2.09
SNED1Q8TER0 CYP4A27P-201ENST00000567218 190 ntBASIC2.01□□□□□ -2.09
SNED1Q8TER0 Y_RNA.771-201ENST00000598668 102 ntBASIC2.01□□□□□ -2.09
SNED1Q8TER0 AC004467.1-201ENST00000615678 330 ntBASIC2.01□□□□□ -2.09
SNED1Q8TER0 Y_RNA.789-201ENST00000622480 102 ntBASIC2.01□□□□□ -2.09
SNED1Q8TER0 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.01□□□□□ -2.09
SNED1Q8TER0 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SNED1Q8TER0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
SNED1Q8TER0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
SNED1Q8TER0 BX322639.1-202ENST00000423987 2213 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 Y_RNA.308-201ENST00000365043 101 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 RNU6-1310P-201ENST00000384153 107 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 RNU6-793P-201ENST00000384233 104 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 RNU6-125P-201ENST00000384505 107 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 SNORA26.3-201ENST00000391119 136 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2□□□□□ -2.09
SNED1Q8TER0 MIR208B-201ENST00000401172 77 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 MIR320B2-201ENST00000408479 138 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 RNA5SP475-201ENST00000410568 110 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 RN7SKP51-201ENST00000410781 304 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 RPS26P42-201ENST00000413485 326 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 AP001324.2-201ENST00000461163 319 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 AC007215.1-201ENST00000464893 276 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 MIR449C-201ENST00000516047 92 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 AC055872.1-201ENST00000570978 278 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 MIR3923-201ENST00000579521 83 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 MIR3136-201ENST00000583498 78 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 SNRPGP20-201ENST00000604477 205 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 AC011921.3-201ENST00000605540 361 ntBASIC2□□□□□ -2.09
SNED1Q8TER0 RNU6-91P-201ENST00000607774 107 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms