Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 SNORD68-201ENST00000363214 84 ntBASIC0.18□□□□□ -2.38
CLDND2Q8NHS1 RNU6-254P-201ENST00000363377 107 ntBASIC0.18□□□□□ -2.38
CLDND2Q8NHS1 RNU6-136P-201ENST00000384663 107 ntBASIC0.18□□□□□ -2.38
CLDND2Q8NHS1 MIR516B2-201ENST00000385190 85 ntBASIC0.18□□□□□ -2.38
CLDND2Q8NHS1 MIR140-201ENST00000385282 100 ntBASIC0.18□□□□□ -2.38
CLDND2Q8NHS1 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.18□□□□□ -2.38
CLDND2Q8NHS1 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.18□□□□□ -2.38
CLDND2Q8NHS1 AL137792.2-201ENST00000443484 235 ntBASIC0.18□□□□□ -2.38
CLDND2Q8NHS1 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.18□□□□□ -2.38
CLDND2Q8NHS1 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.18□□□□□ -2.38
CLDND2Q8NHS1 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.18□□□□□ -2.38
CLDND2Q8NHS1 AC087752.4-201ENST00000605911 462 ntBASIC0.18□□□□□ -2.38
CLDND2Q8NHS1 AP001330.5-201ENST00000607176 411 ntBASIC0.18□□□□□ -2.38
CLDND2Q8NHS1 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
CLDND2Q8NHS1 AC127459.3-201ENST00000624328 466 ntBASIC0.18□□□□□ -2.38
CLDND2Q8NHS1 AC097520.1-201ENST00000624435 385 ntBASIC0.18□□□□□ -2.38
CLDND2Q8NHS1 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.18□□□□□ -2.38
CLDND2Q8NHS1 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
CLDND2Q8NHS1 Y_RNA.85-201ENST00000363014 111 ntBASIC0.17□□□□□ -2.38
CLDND2Q8NHS1 SNORD113.3-201ENST00000364630 78 ntBASIC0.17□□□□□ -2.38
CLDND2Q8NHS1 SNORD14.1-201ENST00000365609 90 ntBASIC0.17□□□□□ -2.38
CLDND2Q8NHS1 MIR514A2-201ENST00000385131 88 ntBASIC0.17□□□□□ -2.38
CLDND2Q8NHS1 MIR514A3-201ENST00000385132 88 ntBASIC0.17□□□□□ -2.38
CLDND2Q8NHS1 MIR1827-201ENST00000408549 66 ntBASIC0.17□□□□□ -2.38
CLDND2Q8NHS1 RNU4-55P-201ENST00000410731 137 ntBASIC0.17□□□□□ -2.38
CLDND2Q8NHS1 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC0.17□□□□□ -2.38
CLDND2Q8NHS1 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.17□□□□□ -2.38
CLDND2Q8NHS1 PCNPP5-201ENST00000452246 481 ntBASIC0.17□□□□□ -2.38
CLDND2Q8NHS1 AC046134.1-201ENST00000514454 666 ntBASIC0.17□□□□□ -2.38
CLDND2Q8NHS1 RNU7-175P-201ENST00000515915 61 ntBASIC0.17□□□□□ -2.38
CLDND2Q8NHS1 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.17□□□□□ -2.38
CLDND2Q8NHS1 AC024933.1-201ENST00000608472 348 ntBASIC0.17□□□□□ -2.38
CLDND2Q8NHS1 AL138726.1-201ENST00000614873 333 ntBASIC0.17□□□□□ -2.38
CLDND2Q8NHS1 Z69908.1-201ENST00000622603 247 ntBASIC0.17□□□□□ -2.38
CLDND2Q8NHS1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.17□□□□□ -2.38
CLDND2Q8NHS1 MIR1-1-201ENST00000362147 71 ntBASIC0.16□□□□□ -2.38
CLDND2Q8NHS1 Y_RNA.30-201ENST00000362572 97 ntBASIC0.16□□□□□ -2.38
CLDND2Q8NHS1 RNA5SP48-201ENST00000363969 126 ntBASIC0.16□□□□□ -2.38
CLDND2Q8NHS1 RNU6-1322P-201ENST00000364309 107 ntBASIC0.16□□□□□ -2.38
CLDND2Q8NHS1 RNU6-522P-201ENST00000364497 107 ntBASIC0.16□□□□□ -2.38
CLDND2Q8NHS1 RNU6-1264P-201ENST00000383891 107 ntBASIC0.16□□□□□ -2.38
CLDND2Q8NHS1 RNU6-95P-201ENST00000384697 107 ntBASIC0.16□□□□□ -2.38
CLDND2Q8NHS1 MIR517A-201ENST00000385001 87 ntBASIC0.16□□□□□ -2.38
CLDND2Q8NHS1 MIR136-201ENST00000385207 82 ntBASIC0.16□□□□□ -2.38
CLDND2Q8NHS1 RNU6-1304P-201ENST00000411374 106 ntBASIC0.16□□□□□ -2.38
CLDND2Q8NHS1 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.16□□□□□ -2.38
CLDND2Q8NHS1 AC243428.1-201ENST00000421099 264 ntBASIC0.16□□□□□ -2.38
CLDND2Q8NHS1 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.16□□□□□ -2.38
CLDND2Q8NHS1 MTND1P11-201ENST00000456661 876 ntBASIC0.16□□□□□ -2.38
CLDND2Q8NHS1 AC105313.1-201ENST00000509121 353 ntBASIC0.16□□□□□ -2.38
CLDND2Q8NHS1 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.16□□□□□ -2.38
CLDND2Q8NHS1 RN7SKP298-201ENST00000515950 94 ntBASIC0.16□□□□□ -2.38
CLDND2Q8NHS1 RNU11-2P-201ENST00000516898 142 ntBASIC0.16□□□□□ -2.38
CLDND2Q8NHS1 SNORA18.7-201ENST00000516910 131 ntBASIC0.16□□□□□ -2.38
CLDND2Q8NHS1 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.16□□□□□ -2.38
CLDND2Q8NHS1 AC093027.1-201ENST00000546698 429 ntBASIC0.16□□□□□ -2.38
CLDND2Q8NHS1 MIR4764-201ENST00000580680 88 ntBASIC0.16□□□□□ -2.38
CLDND2Q8NHS1 AC073114.1-201ENST00000612027 490 ntBASIC0.16□□□□□ -2.38
CLDND2Q8NHS1 Y_RNA.231-201ENST00000364358 102 ntBASIC0.15□□□□□ -2.39
CLDND2Q8NHS1 RNU6-117P-201ENST00000365415 107 ntBASIC0.15□□□□□ -2.39
CLDND2Q8NHS1 RNU6-281P-201ENST00000384212 103 ntBASIC0.15□□□□□ -2.39
CLDND2Q8NHS1 RNA5SP63-201ENST00000391225 112 ntBASIC0.15□□□□□ -2.39
CLDND2Q8NHS1 RNA5SP127-201ENST00000411051 133 ntBASIC0.15□□□□□ -2.39
CLDND2Q8NHS1 RNU6-177P-201ENST00000411257 104 ntBASIC0.15□□□□□ -2.39
CLDND2Q8NHS1 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.15□□□□□ -2.39
CLDND2Q8NHS1 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.15□□□□□ -2.39
CLDND2Q8NHS1 AC108740.1-201ENST00000498629 225 ntBASIC0.15□□□□□ -2.39
CLDND2Q8NHS1 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.15□□□□□ -2.39
CLDND2Q8NHS1 RNU6-1114P-201ENST00000516022 107 ntBASIC0.15□□□□□ -2.39
CLDND2Q8NHS1 MIR3908-201ENST00000579798 126 ntBASIC0.15□□□□□ -2.39
CLDND2Q8NHS1 AC019193.3-201ENST00000609144 554 ntBASIC0.15□□□□□ -2.39
CLDND2Q8NHS1 MIR2909-201ENST00000617113 69 ntBASIC0.15□□□□□ -2.39
CLDND2Q8NHS1 RNU6-654P-201ENST00000364373 107 ntBASIC0.14□□□□□ -2.39
CLDND2Q8NHS1 Y_RNA.409-201ENST00000383990 98 ntBASIC0.14□□□□□ -2.39
CLDND2Q8NHS1 SNORA75-201ENST00000384158 137 ntBASIC0.14□□□□□ -2.39
CLDND2Q8NHS1 SNORA2B-201ENST00000384583 137 ntBASIC0.14□□□□□ -2.39
CLDND2Q8NHS1 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.14□□□□□ -2.39
CLDND2Q8NHS1 MIR873-201ENST00000401120 77 ntBASIC0.14□□□□□ -2.39
CLDND2Q8NHS1 RNU6-648P-201ENST00000410190 107 ntBASIC0.14□□□□□ -2.39
CLDND2Q8NHS1 Y_RNA.621-201ENST00000411065 96 ntBASIC0.14□□□□□ -2.39
CLDND2Q8NHS1 AL590632.1-201ENST00000424289 371 ntBASIC0.14□□□□□ -2.39
CLDND2Q8NHS1 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.14□□□□□ -2.39
CLDND2Q8NHS1 RNU7-43P-201ENST00000516554 64 ntBASIC0.14□□□□□ -2.39
CLDND2Q8NHS1 Y_RNA.695-201ENST00000516715 107 ntBASIC0.14□□□□□ -2.39
CLDND2Q8NHS1 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.14□□□□□ -2.39
CLDND2Q8NHS1 AC093023.1-201ENST00000547375 507 ntBASIC0.14□□□□□ -2.39
CLDND2Q8NHS1 MIR5696-201ENST00000578474 85 ntBASIC0.14□□□□□ -2.39
CLDND2Q8NHS1 AC104695.3-201ENST00000604052 296 ntBASIC0.14□□□□□ -2.39
CLDND2Q8NHS1 RNU6-89P-201ENST00000606519 100 ntBASIC0.14□□□□□ -2.39
CLDND2Q8NHS1 AC092954.2-201ENST00000609103 430 ntBASIC0.14□□□□□ -2.39
CLDND2Q8NHS1 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.14□□□□□ -2.39
CLDND2Q8NHS1 MIR6718-201ENST00000616153 80 ntBASIC0.14□□□□□ -2.39
CLDND2Q8NHS1 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.14□□□□□ -2.39
CLDND2Q8NHS1 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.14□□□□□ -2.39
CLDND2Q8NHS1 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.14□□□□□ -2.39
CLDND2Q8NHS1 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.14□□□□□ -2.39
CLDND2Q8NHS1 RNU6-1327P-201ENST00000365302 105 ntBASIC0.13□□□□□ -2.39
CLDND2Q8NHS1 Y_RNA.372-201ENST00000365599 102 ntBASIC0.13□□□□□ -2.39
CLDND2Q8NHS1 Y_RNA.405-201ENST00000383979 100 ntBASIC0.13□□□□□ -2.39
CLDND2Q8NHS1 Y_RNA.451-201ENST00000384200 100 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 161 ms