Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.57□□□□□ -2
SIMC1Q8NDZ2 AC109810.1-201ENST00000534066 224 ntBASIC2.57□□□□□ -2
SIMC1Q8NDZ2 NDUFA5P6-201ENST00000542110 379 ntBASIC2.57□□□□□ -2
SIMC1Q8NDZ2 MIR203B-201ENST00000636080 86 ntBASIC2.57□□□□□ -2
SIMC1Q8NDZ2 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.57□□□□□ -2
SIMC1Q8NDZ2 Z82195.2-201ENST00000612348 18351 ntBASIC2.56□□□□□ -2
SIMC1Q8NDZ2 AC010332.2-201ENST00000613083 1904 ntBASIC2.56□□□□□ -2
SIMC1Q8NDZ2 AC062016.1-201ENST00000355719 319 ntBASIC2.56□□□□□ -2
SIMC1Q8NDZ2 RNU6-944P-201ENST00000364023 107 ntBASIC2.56□□□□□ -2
SIMC1Q8NDZ2 RNU6-969P-201ENST00000383900 105 ntBASIC2.56□□□□□ -2
SIMC1Q8NDZ2 AL138827.1-201ENST00000402666 306 ntBASIC2.56□□□□□ -2
SIMC1Q8NDZ2 AC087499.2-201ENST00000432861 149 ntBASIC2.56□□□□□ -2
SIMC1Q8NDZ2 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.56□□□□□ -2
SIMC1Q8NDZ2 AC107027.2-201ENST00000512197 115 ntBASIC2.56□□□□□ -2
SIMC1Q8NDZ2 SNORA9.3-201ENST00000516383 129 ntBASIC2.56□□□□□ -2
SIMC1Q8NDZ2 RNU6-667P-201ENST00000517186 102 ntBASIC2.56□□□□□ -2
SIMC1Q8NDZ2 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SIMC1Q8NDZ2 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.56□□□□□ -2
SIMC1Q8NDZ2 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SIMC1Q8NDZ2 AC080100.1-201ENST00000624239 5356 ntBASIC2.55□□□□□ -2
SIMC1Q8NDZ2 Y_RNA.81-201ENST00000362997 102 ntBASIC2.55□□□□□ -2
SIMC1Q8NDZ2 RNU6-1305P-201ENST00000364353 104 ntBASIC2.55□□□□□ -2
SIMC1Q8NDZ2 SNORD32B-201ENST00000364460 84 ntBASIC2.55□□□□□ -2
SIMC1Q8NDZ2 RNU4-11P-201ENST00000365287 132 ntBASIC2.55□□□□□ -2
SIMC1Q8NDZ2 RNU1-148P-201ENST00000384472 162 ntBASIC2.55□□□□□ -2
SIMC1Q8NDZ2 MIR586-201ENST00000385035 97 ntBASIC2.55□□□□□ -2
SIMC1Q8NDZ2 MIR616-201ENST00000385293 97 ntBASIC2.55□□□□□ -2
SIMC1Q8NDZ2 MIR526A2-201ENST00000390198 65 ntBASIC2.55□□□□□ -2
SIMC1Q8NDZ2 RNA5SP270-201ENST00000411361 118 ntBASIC2.55□□□□□ -2
SIMC1Q8NDZ2 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.55□□□□□ -2
SIMC1Q8NDZ2 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.55□□□□□ -2
SIMC1Q8NDZ2 AC245047.8-201ENST00000456455 284 ntBASIC2.55□□□□□ -2
SIMC1Q8NDZ2 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
SIMC1Q8NDZ2 SRIP1-201ENST00000489235 288 ntBASIC2.55□□□□□ -2
SIMC1Q8NDZ2 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.55□□□□□ -2
SIMC1Q8NDZ2 RNU6-1007P-201ENST00000516586 107 ntBASIC2.55□□□□□ -2
SIMC1Q8NDZ2 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.55□□□□□ -2
SIMC1Q8NDZ2 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.55□□□□□ -2
SIMC1Q8NDZ2 DNAJC19P2-201ENST00000593340 302 ntBASIC2.55□□□□□ -2
SIMC1Q8NDZ2 AC025754.2-201ENST00000606491 432 ntBASIC2.55□□□□□ -2
SIMC1Q8NDZ2 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.55□□□□□ -2
SIMC1Q8NDZ2 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.55□□□□□ -2
SIMC1Q8NDZ2 MIR3658-201ENST00000636291 56 ntBASIC2.55□□□□□ -2
SIMC1Q8NDZ2 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.55□□□□□ -2
SIMC1Q8NDZ2 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.54□□□□□ -2
SIMC1Q8NDZ2 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SIMC1Q8NDZ2 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.54□□□□□ -2
SIMC1Q8NDZ2 RNU6-1205P-201ENST00000363625 106 ntBASIC2.54□□□□□ -2
SIMC1Q8NDZ2 Y_RNA.172-201ENST00000363765 102 ntBASIC2.54□□□□□ -2
SIMC1Q8NDZ2 SNORA67.1-201ENST00000364749 141 ntBASIC2.54□□□□□ -2
SIMC1Q8NDZ2 MT-TT-201ENST00000387460 66 ntBASIC2.54□□□□□ -2
SIMC1Q8NDZ2 SNORA40-201ENST00000388090 126 ntBASIC2.54□□□□□ -2
SIMC1Q8NDZ2 RNA5SP181-201ENST00000410246 98 ntBASIC2.54□□□□□ -2
SIMC1Q8NDZ2 EDDM3CP-201ENST00000415977 425 ntBASIC2.54□□□□□ -2
SIMC1Q8NDZ2 MTND4LP9-201ENST00000427694 174 ntBASIC2.54□□□□□ -2
SIMC1Q8NDZ2 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.54□□□□□ -2
SIMC1Q8NDZ2 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.54□□□□□ -2
SIMC1Q8NDZ2 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.54□□□□□ -2
SIMC1Q8NDZ2 SNORA25.12-201ENST00000516202 82 ntBASIC2.54□□□□□ -2
SIMC1Q8NDZ2 RNU6-1098P-201ENST00000516772 96 ntBASIC2.54□□□□□ -2
SIMC1Q8NDZ2 RNA5SP137-201ENST00000516833 135 ntBASIC2.54□□□□□ -2
SIMC1Q8NDZ2 RNA5SP402-201ENST00000517148 110 ntBASIC2.54□□□□□ -2
SIMC1Q8NDZ2 AC091544.4-201ENST00000555268 342 ntBASIC2.54□□□□□ -2
SIMC1Q8NDZ2 MIR4446-201ENST00000578505 67 ntBASIC2.54□□□□□ -2
SIMC1Q8NDZ2 MIR3605-201ENST00000583214 100 ntBASIC2.54□□□□□ -2
SIMC1Q8NDZ2 AC078899.2-201ENST00000595282 212 ntBASIC2.54□□□□□ -2
SIMC1Q8NDZ2 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.54□□□□□ -2
SIMC1Q8NDZ2 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SIMC1Q8NDZ2 SNORA20-201ENST00000384662 132 ntBASIC2.53□□□□□ -2
SIMC1Q8NDZ2 RNU6-376P-201ENST00000384731 106 ntBASIC2.53□□□□□ -2
SIMC1Q8NDZ2 MIR1185-2-201ENST00000408687 86 ntBASIC2.53□□□□□ -2
SIMC1Q8NDZ2 SRIP3-201ENST00000413200 219 ntBASIC2.53□□□□□ -2
SIMC1Q8NDZ2 RPL30P13-201ENST00000418873 348 ntBASIC2.53□□□□□ -2
SIMC1Q8NDZ2 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.53□□□□□ -2
SIMC1Q8NDZ2 AL109933.2-201ENST00000452651 260 ntBASIC2.53□□□□□ -2
SIMC1Q8NDZ2 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.53□□□□□ -2
SIMC1Q8NDZ2 SNORA4.4-201ENST00000515921 135 ntBASIC2.53□□□□□ -2
SIMC1Q8NDZ2 SNORA70.12-201ENST00000516084 153 ntBASIC2.53□□□□□ -2
SIMC1Q8NDZ2 SNORA31.11-201ENST00000516528 139 ntBASIC2.53□□□□□ -2
SIMC1Q8NDZ2 MIR5688-201ENST00000580619 83 ntBASIC2.53□□□□□ -2
SIMC1Q8NDZ2 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
SIMC1Q8NDZ2 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.53□□□□□ -2
SIMC1Q8NDZ2 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.53□□□□□ -2
SIMC1Q8NDZ2 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
SIMC1Q8NDZ2 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SIMC1Q8NDZ2 MIR26A1-201ENST00000362205 77 ntBASIC2.52□□□□□ -2.01
SIMC1Q8NDZ2 Y_RNA.124-201ENST00000363339 93 ntBASIC2.52□□□□□ -2.01
SIMC1Q8NDZ2 Y_RNA.229-201ENST00000364347 113 ntBASIC2.52□□□□□ -2.01
SIMC1Q8NDZ2 U8.7-201ENST00000364940 136 ntBASIC2.52□□□□□ -2.01
SIMC1Q8NDZ2 Y_RNA.337-201ENST00000365312 102 ntBASIC2.52□□□□□ -2.01
SIMC1Q8NDZ2 SNORA70B-201ENST00000384210 135 ntBASIC2.52□□□□□ -2.01
SIMC1Q8NDZ2 MIR196B-201ENST00000384852 84 ntBASIC2.52□□□□□ -2.01
SIMC1Q8NDZ2 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SIMC1Q8NDZ2 MIR513C-201ENST00000401352 84 ntBASIC2.52□□□□□ -2.01
SIMC1Q8NDZ2 AC006461.1-201ENST00000412637 326 ntBASIC2.52□□□□□ -2.01
SIMC1Q8NDZ2 AC008267.6-201ENST00000441664 139 ntBASIC2.52□□□□□ -2.01
SIMC1Q8NDZ2 AL121914.1-201ENST00000450188 156 ntBASIC2.52□□□□□ -2.01
SIMC1Q8NDZ2 AL137159.1-201ENST00000452808 512 ntBASIC2.52□□□□□ -2.01
SIMC1Q8NDZ2 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.52□□□□□ -2.01
SIMC1Q8NDZ2 HMGN2P9-201ENST00000476875 229 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms