Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 SNORA31.17-201ENST00000516953 127 ntBASIC2.02□□□□□ -2.09
USP38Q8NB14 AC011604.1-201ENST00000545978 196 ntBASIC2.02□□□□□ -2.09
USP38Q8NB14 SUB1P4-201ENST00000566062 339 ntBASIC2.02□□□□□ -2.09
USP38Q8NB14 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.02□□□□□ -2.09
USP38Q8NB14 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
USP38Q8NB14 Y_RNA.101-201ENST00000363154 102 ntBASIC2.01□□□□□ -2.09
USP38Q8NB14 Y_RNA.143-201ENST00000363520 106 ntBASIC2.01□□□□□ -2.09
USP38Q8NB14 RNU6-112P-201ENST00000363599 104 ntBASIC2.01□□□□□ -2.09
USP38Q8NB14 MIR520A-201ENST00000384862 85 ntBASIC2.01□□□□□ -2.09
USP38Q8NB14 MIR515-2-201ENST00000384883 83 ntBASIC2.01□□□□□ -2.09
USP38Q8NB14 MIR515-1-201ENST00000384884 83 ntBASIC2.01□□□□□ -2.09
USP38Q8NB14 AC005002.2-201ENST00000438228 269 ntBASIC2.01□□□□□ -2.09
USP38Q8NB14 RPS29P11-201ENST00000496507 171 ntBASIC2.01□□□□□ -2.09
USP38Q8NB14 AC093852.1-201ENST00000503587 266 ntBASIC2.01□□□□□ -2.09
USP38Q8NB14 RNA5SP102-201ENST00000516865 106 ntBASIC2.01□□□□□ -2.09
USP38Q8NB14 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.01□□□□□ -2.09
USP38Q8NB14 AC104695.3-201ENST00000604052 296 ntBASIC2.01□□□□□ -2.09
USP38Q8NB14 AC012493.3-201ENST00000604494 112 ntBASIC2.01□□□□□ -2.09
USP38Q8NB14 AL512598.1-201ENST00000610158 273 ntBASIC2.01□□□□□ -2.09
USP38Q8NB14 AC040896.1-201ENST00000613819 479 ntBASIC2.01□□□□□ -2.09
USP38Q8NB14 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
USP38Q8NB14 RNU6-694P-201ENST00000364071 147 ntBASIC2□□□□□ -2.09
USP38Q8NB14 RNU6-1175P-201ENST00000365200 107 ntBASIC2□□□□□ -2.09
USP38Q8NB14 Y_RNA.527-201ENST00000384573 102 ntBASIC2□□□□□ -2.09
USP38Q8NB14 RNU6-823P-201ENST00000391042 103 ntBASIC2□□□□□ -2.09
USP38Q8NB14 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2□□□□□ -2.09
USP38Q8NB14 AC245047.4-201ENST00000433189 144 ntBASIC2□□□□□ -2.09
USP38Q8NB14 RPEP5-201ENST00000441137 268 ntBASIC2□□□□□ -2.09
USP38Q8NB14 AL163195.1-201ENST00000496941 348 ntBASIC2□□□□□ -2.09
USP38Q8NB14 RNA5SP20-201ENST00000515976 84 ntBASIC2□□□□□ -2.09
USP38Q8NB14 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2□□□□□ -2.09
USP38Q8NB14 MIR3684-201ENST00000579779 74 ntBASIC2□□□□□ -2.09
USP38Q8NB14 PVT1_3.1-201ENST00000620853 95 ntBASIC2□□□□□ -2.09
USP38Q8NB14 SNORD114-22-201ENST00000365423 72 ntBASIC1.99□□□□□ -2.09
USP38Q8NB14 RNU6-1227P-201ENST00000383981 107 ntBASIC1.99□□□□□ -2.09
USP38Q8NB14 RNU6-937P-201ENST00000384325 106 ntBASIC1.99□□□□□ -2.09
USP38Q8NB14 EBAG9P1-201ENST00000418955 543 ntBASIC1.99□□□□□ -2.09
USP38Q8NB14 AC073910.1-201ENST00000445047 438 ntBASIC1.99□□□□□ -2.09
USP38Q8NB14 MRPS10P1-201ENST00000448483 130 ntBASIC1.99□□□□□ -2.09
USP38Q8NB14 RNU7-110P-201ENST00000516891 62 ntBASIC1.99□□□□□ -2.09
USP38Q8NB14 AC022616.4-201ENST00000522985 181 ntBASIC1.99□□□□□ -2.09
USP38Q8NB14 AL021879.1-201ENST00000611756 288 ntBASIC1.99□□□□□ -2.09
USP38Q8NB14 AC010205.1-201ENST00000616668 449 ntBASIC1.99□□□□□ -2.09
USP38Q8NB14 U6.73-201ENST00000619194 103 ntBASIC1.99□□□□□ -2.09
USP38Q8NB14 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
USP38Q8NB14 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
USP38Q8NB14 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
USP38Q8NB14 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
USP38Q8NB14 RNU6-271P-201ENST00000363858 105 ntBASIC1.98□□□□□ -2.09
USP38Q8NB14 Y_RNA.446-201ENST00000384178 104 ntBASIC1.98□□□□□ -2.09
USP38Q8NB14 RNU2-54P-201ENST00000410299 190 ntBASIC1.98□□□□□ -2.09
USP38Q8NB14 RPL31P63-201ENST00000422565 375 ntBASIC1.98□□□□□ -2.09
USP38Q8NB14 Y_RNA.713-201ENST00000517013 96 ntBASIC1.98□□□□□ -2.09
USP38Q8NB14 Y_RNA.715-201ENST00000517082 110 ntBASIC1.98□□□□□ -2.09
USP38Q8NB14 RNU7-172P-201ENST00000517125 64 ntBASIC1.98□□□□□ -2.09
USP38Q8NB14 Y_RNA.721-201ENST00000517207 102 ntBASIC1.98□□□□□ -2.09
USP38Q8NB14 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.98□□□□□ -2.09
USP38Q8NB14 AC011373.1-201ENST00000607270 237 ntBASIC1.98□□□□□ -2.09
USP38Q8NB14 PART1_1.1-201ENST00000611761 217 ntBASIC1.98□□□□□ -2.09
USP38Q8NB14 AC022709.1-201ENST00000615967 87 ntBASIC1.98□□□□□ -2.09
USP38Q8NB14 AC006435.5-201ENST00000624486 112 ntBASIC1.98□□□□□ -2.09
USP38Q8NB14 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
USP38Q8NB14 SNORA27.1-201ENST00000362604 124 ntBASIC1.97□□□□□ -2.09
USP38Q8NB14 Y_RNA.124-201ENST00000363339 93 ntBASIC1.97□□□□□ -2.09
USP38Q8NB14 Y_RNA.230-201ENST00000364348 109 ntBASIC1.97□□□□□ -2.09
USP38Q8NB14 RNU4-76P-201ENST00000364509 141 ntBASIC1.97□□□□□ -2.09
USP38Q8NB14 AC117470.1-201ENST00000381974 330 ntBASIC1.97□□□□□ -2.09
USP38Q8NB14 RNU6-296P-201ENST00000384608 107 ntBASIC1.97□□□□□ -2.09
USP38Q8NB14 Y_RNA.551-201ENST00000384661 102 ntBASIC1.97□□□□□ -2.09
USP38Q8NB14 RNU4-30P-201ENST00000410245 143 ntBASIC1.97□□□□□ -2.09
USP38Q8NB14 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.97□□□□□ -2.09
USP38Q8NB14 AC069257.2-201ENST00000441819 155 ntBASIC1.97□□□□□ -2.09
USP38Q8NB14 RNU1-123P-201ENST00000458950 160 ntBASIC1.97□□□□□ -2.09
USP38Q8NB14 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.97□□□□□ -2.09
USP38Q8NB14 HMGN1P7-201ENST00000491722 313 ntBASIC1.97□□□□□ -2.09
USP38Q8NB14 RNU2-12P-201ENST00000517216 168 ntBASIC1.97□□□□□ -2.09
USP38Q8NB14 RNA5SP437-201ENST00000517249 129 ntBASIC1.97□□□□□ -2.09
USP38Q8NB14 AC024995.1-201ENST00000523014 93 ntBASIC1.97□□□□□ -2.09
USP38Q8NB14 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.97□□□□□ -2.09
USP38Q8NB14 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.97□□□□□ -2.09
USP38Q8NB14 AC073413.2-201ENST00000604332 360 ntBASIC1.97□□□□□ -2.09
USP38Q8NB14 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.97□□□□□ -2.09
USP38Q8NB14 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
USP38Q8NB14 Y_RNA.158-201ENST00000363651 101 ntBASIC1.96□□□□□ -2.1
USP38Q8NB14 Y_RNA.243-201ENST00000364481 109 ntBASIC1.96□□□□□ -2.1
USP38Q8NB14 SNORA16.1-201ENST00000364597 132 ntBASIC1.96□□□□□ -2.1
USP38Q8NB14 Y_RNA.331-201ENST00000365267 102 ntBASIC1.96□□□□□ -2.1
USP38Q8NB14 RNU6-21P-201ENST00000384710 107 ntBASIC1.96□□□□□ -2.1
USP38Q8NB14 RNA5SP109-201ENST00000391010 116 ntBASIC1.96□□□□□ -2.1
USP38Q8NB14 MIR873-201ENST00000401120 77 ntBASIC1.96□□□□□ -2.1
USP38Q8NB14 RNU5A-5P-201ENST00000411054 116 ntBASIC1.96□□□□□ -2.1
USP38Q8NB14 RNU6-130P-201ENST00000411112 103 ntBASIC1.96□□□□□ -2.1
USP38Q8NB14 AC009310.1-201ENST00000414414 451 ntBASIC1.96□□□□□ -2.1
USP38Q8NB14 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.96□□□□□ -2.1
USP38Q8NB14 HSPE1P9-201ENST00000440046 311 ntBASIC1.96□□□□□ -2.1
USP38Q8NB14 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.96□□□□□ -2.1
USP38Q8NB14 MTCYBP6-201ENST00000441810 138 ntBASIC1.96□□□□□ -2.1
USP38Q8NB14 RNU7-99P-201ENST00000516271 62 ntBASIC1.96□□□□□ -2.1
USP38Q8NB14 RNU6-1046P-201ENST00000516538 107 ntBASIC1.96□□□□□ -2.1
USP38Q8NB14 AP003072.1-201ENST00000531740 145 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms