Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 MIR1185-1-201ENST00000408598 86 ntBASIC0.32□□□□□ -2.36
ZIC4Q8N9L1 RNU6-994P-201ENST00000410507 111 ntBASIC0.32□□□□□ -2.36
ZIC4Q8N9L1 Y_RNA.615-201ENST00000410769 117 ntBASIC0.32□□□□□ -2.36
ZIC4Q8N9L1 ELOCP21-201ENST00000412558 336 ntBASIC0.32□□□□□ -2.36
ZIC4Q8N9L1 USP9YP16-201ENST00000430287 407 ntBASIC0.32□□□□□ -2.36
ZIC4Q8N9L1 SEPT14P3-201ENST00000439401 183 ntBASIC0.32□□□□□ -2.36
ZIC4Q8N9L1 AL732372.2-207ENST00000445840 183 ntBASIC0.32□□□□□ -2.36
ZIC4Q8N9L1 UQCRBP2-201ENST00000447827 297 ntBASIC0.32□□□□□ -2.36
ZIC4Q8N9L1 SEPT14P2-201ENST00000453405 183 ntBASIC0.32□□□□□ -2.36
ZIC4Q8N9L1 USP9YP23-201ENST00000455085 407 ntBASIC0.32□□□□□ -2.36
ZIC4Q8N9L1 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.32□□□□□ -2.36
ZIC4Q8N9L1 SEPT14P4-201ENST00000513445 186 ntBASIC0.32□□□□□ -2.36
ZIC4Q8N9L1 Y_RNA.706-201ENST00000516933 99 ntBASIC0.32□□□□□ -2.36
ZIC4Q8N9L1 FO082796.1-201ENST00000523795 183 ntBASIC0.32□□□□□ -2.36
ZIC4Q8N9L1 AC093023.1-201ENST00000547375 507 ntBASIC0.32□□□□□ -2.36
ZIC4Q8N9L1 MIR4273-201ENST00000582824 84 ntBASIC0.32□□□□□ -2.36
ZIC4Q8N9L1 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.32□□□□□ -2.36
ZIC4Q8N9L1 MIR6863-201ENST00000636112 90 ntBASIC0.32□□□□□ -2.36
ZIC4Q8N9L1 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.31□□□□□ -2.36
ZIC4Q8N9L1 RNU6-1252P-201ENST00000363054 104 ntBASIC0.31□□□□□ -2.36
ZIC4Q8N9L1 RNA5SP48-201ENST00000363969 126 ntBASIC0.31□□□□□ -2.36
ZIC4Q8N9L1 Y_RNA.405-201ENST00000383979 100 ntBASIC0.31□□□□□ -2.36
ZIC4Q8N9L1 Y_RNA.451-201ENST00000384200 100 ntBASIC0.31□□□□□ -2.36
ZIC4Q8N9L1 RNU6-1042P-201ENST00000384204 107 ntBASIC0.31□□□□□ -2.36
ZIC4Q8N9L1 Y_RNA.490-201ENST00000384413 102 ntBASIC0.31□□□□□ -2.36
ZIC4Q8N9L1 Y_RNA.524-201ENST00000384564 100 ntBASIC0.31□□□□□ -2.36
ZIC4Q8N9L1 Y_RNA.561-201ENST00000384694 100 ntBASIC0.31□□□□□ -2.36
ZIC4Q8N9L1 MIR15B-201ENST00000385045 98 ntBASIC0.31□□□□□ -2.36
ZIC4Q8N9L1 MIR873-201ENST00000401120 77 ntBASIC0.31□□□□□ -2.36
ZIC4Q8N9L1 SNORD111-201ENST00000408139 94 ntBASIC0.31□□□□□ -2.36
ZIC4Q8N9L1 PIGPP3-201ENST00000425307 415 ntBASIC0.31□□□□□ -2.36
ZIC4Q8N9L1 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.31□□□□□ -2.36
ZIC4Q8N9L1 AC244023.1-201ENST00000426884 112 ntBASIC0.31□□□□□ -2.36
ZIC4Q8N9L1 MTND3P23-201ENST00000431980 347 ntBASIC0.31□□□□□ -2.36
ZIC4Q8N9L1 SUMO1P2-201ENST00000452524 304 ntBASIC0.31□□□□□ -2.36
ZIC4Q8N9L1 AC010424.1-201ENST00000506336 297 ntBASIC0.31□□□□□ -2.36
ZIC4Q8N9L1 RN7SKP12-201ENST00000516275 143 ntBASIC0.31□□□□□ -2.36
ZIC4Q8N9L1 Y_RNA.693-201ENST00000516641 110 ntBASIC0.31□□□□□ -2.36
ZIC4Q8N9L1 AC090617.3-201ENST00000573670 475 ntBASIC0.31□□□□□ -2.36
ZIC4Q8N9L1 AC011195.1-201ENST00000578177 177 ntBASIC0.31□□□□□ -2.36
ZIC4Q8N9L1 RN7SL793P-201ENST00000583259 296 ntBASIC0.31□□□□□ -2.36
ZIC4Q8N9L1 AC010525.2-201ENST00000590920 195 ntBASIC0.31□□□□□ -2.36
ZIC4Q8N9L1 AC125232.2-201ENST00000592457 143 ntBASIC0.31□□□□□ -2.36
ZIC4Q8N9L1 AC242498.1-201ENST00000604134 111 ntBASIC0.31□□□□□ -2.36
ZIC4Q8N9L1 AC005828.6-201ENST00000606610 232 ntBASIC0.31□□□□□ -2.36
ZIC4Q8N9L1 AL357075.2-201ENST00000614906 189 ntBASIC0.31□□□□□ -2.36
ZIC4Q8N9L1 AC243994.1-201ENST00000618627 109 ntBASIC0.31□□□□□ -2.36
ZIC4Q8N9L1 MTND5P26-201ENST00000426018 1752 ntBASIC0.31□□□□□ -2.36
ZIC4Q8N9L1 AL589743.1-201ENST00000551932 2712 ntBASIC0.3□□□□□ -2.36
ZIC4Q8N9L1 ZNF299P-201ENST00000406845 1804 ntBASIC0.3□□□□□ -2.36
ZIC4Q8N9L1 SNORA25.3-201ENST00000363205 127 ntBASIC0.3□□□□□ -2.36
ZIC4Q8N9L1 SNORD68-201ENST00000363214 84 ntBASIC0.3□□□□□ -2.36
ZIC4Q8N9L1 Y_RNA.256-201ENST00000364594 104 ntBASIC0.3□□□□□ -2.36
ZIC4Q8N9L1 VTRNA1-3-201ENST00000365645 89 ntBASIC0.3□□□□□ -2.36
ZIC4Q8N9L1 Y_RNA.393-201ENST00000383936 102 ntBASIC0.3□□□□□ -2.36
ZIC4Q8N9L1 RNU6-1119P-201ENST00000384349 108 ntBASIC0.3□□□□□ -2.36
ZIC4Q8N9L1 RNU6-1297P-201ENST00000384415 104 ntBASIC0.3□□□□□ -2.36
ZIC4Q8N9L1 Y_RNA.530-201ENST00000384587 101 ntBASIC0.3□□□□□ -2.36
ZIC4Q8N9L1 Y_RNA.533-201ENST00000384596 114 ntBASIC0.3□□□□□ -2.36
ZIC4Q8N9L1 RNU6-780P-201ENST00000391030 104 ntBASIC0.3□□□□□ -2.36
ZIC4Q8N9L1 RNU6-908P-201ENST00000410160 94 ntBASIC0.3□□□□□ -2.36
ZIC4Q8N9L1 RNA5SP222-201ENST00000411039 105 ntBASIC0.3□□□□□ -2.36
ZIC4Q8N9L1 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.3□□□□□ -2.36
ZIC4Q8N9L1 PCNPP5-201ENST00000452246 481 ntBASIC0.3□□□□□ -2.36
ZIC4Q8N9L1 AC114811.1-201ENST00000507207 168 ntBASIC0.3□□□□□ -2.36
ZIC4Q8N9L1 RN7SKP164-201ENST00000516138 266 ntBASIC0.3□□□□□ -2.36
ZIC4Q8N9L1 SNORA74.3-201ENST00000517108 154 ntBASIC0.3□□□□□ -2.36
ZIC4Q8N9L1 AC006362.1-201ENST00000567392 174 ntBASIC0.3□□□□□ -2.36
ZIC4Q8N9L1 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.3□□□□□ -2.36
ZIC4Q8N9L1 MIR3672-201ENST00000584290 82 ntBASIC0.3□□□□□ -2.36
ZIC4Q8N9L1 AC100812.1-201ENST00000607622 580 ntBASIC0.3□□□□□ -2.36
ZIC4Q8N9L1 DISC2.1-201ENST00000612827 205 ntBASIC0.3□□□□□ -2.36
ZIC4Q8N9L1 AL359880.1-201ENST00000621879 266 ntBASIC0.3□□□□□ -2.36
ZIC4Q8N9L1 RNU6-222P-201ENST00000362438 107 ntBASIC0.29□□□□□ -2.36
ZIC4Q8N9L1 Y_RNA.77-201ENST00000362962 107 ntBASIC0.29□□□□□ -2.36
ZIC4Q8N9L1 Y_RNA.212-201ENST00000364177 102 ntBASIC0.29□□□□□ -2.36
ZIC4Q8N9L1 SNORD14.1-201ENST00000365609 90 ntBASIC0.29□□□□□ -2.36
ZIC4Q8N9L1 SNORA36.2-201ENST00000384004 127 ntBASIC0.29□□□□□ -2.36
ZIC4Q8N9L1 Y_RNA.466-201ENST00000384294 113 ntBASIC0.29□□□□□ -2.36
ZIC4Q8N9L1 SNORD116-8-201ENST00000384365 95 ntBASIC0.29□□□□□ -2.36
ZIC4Q8N9L1 MIR136-201ENST00000385207 82 ntBASIC0.29□□□□□ -2.36
ZIC4Q8N9L1 MTCO3P40-201ENST00000392516 676 ntBASIC0.29□□□□□ -2.36
ZIC4Q8N9L1 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.29□□□□□ -2.36
ZIC4Q8N9L1 MIR1298-201ENST00000408783 112 ntBASIC0.29□□□□□ -2.36
ZIC4Q8N9L1 RNU6-1001P-201ENST00000411265 100 ntBASIC0.29□□□□□ -2.36
ZIC4Q8N9L1 AC244098.3-201ENST00000424803 96 ntBASIC0.29□□□□□ -2.36
ZIC4Q8N9L1 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.29□□□□□ -2.36
ZIC4Q8N9L1 AC019235.1-201ENST00000503847 207 ntBASIC0.29□□□□□ -2.36
ZIC4Q8N9L1 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.29□□□□□ -2.36
ZIC4Q8N9L1 RNU7-41P-201ENST00000515917 61 ntBASIC0.29□□□□□ -2.36
ZIC4Q8N9L1 RNU6-256P-201ENST00000516747 97 ntBASIC0.29□□□□□ -2.36
ZIC4Q8N9L1 RNU11-2P-201ENST00000516898 142 ntBASIC0.29□□□□□ -2.36
ZIC4Q8N9L1 AC023442.1-201ENST00000531247 422 ntBASIC0.29□□□□□ -2.36
ZIC4Q8N9L1 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.29□□□□□ -2.36
ZIC4Q8N9L1 AL512360.1-201ENST00000555346 234 ntBASIC0.29□□□□□ -2.36
ZIC4Q8N9L1 RNU6-94P-201ENST00000607728 107 ntBASIC0.29□□□□□ -2.36
ZIC4Q8N9L1 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.29□□□□□ -2.36
ZIC4Q8N9L1 AC090582.1-201ENST00000636321 199 ntBASIC0.29□□□□□ -2.36
ZIC4Q8N9L1 AC010487.4-201ENST00000637027 61 ntBASIC0.29□□□□□ -2.36
ZIC4Q8N9L1 MTND5P16-201ENST00000460269 1703 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms