Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 Y_RNA.405-201ENST00000383979 100 ntBASIC0.41□□□□□ -2.34
TRAM1L1Q8N609 Y_RNA.451-201ENST00000384200 100 ntBASIC0.41□□□□□ -2.34
TRAM1L1Q8N609 RNU6-1119P-201ENST00000384349 108 ntBASIC0.41□□□□□ -2.34
TRAM1L1Q8N609 SNORD116-8-201ENST00000384365 95 ntBASIC0.41□□□□□ -2.34
TRAM1L1Q8N609 Y_RNA.524-201ENST00000384564 100 ntBASIC0.41□□□□□ -2.34
TRAM1L1Q8N609 Y_RNA.561-201ENST00000384694 100 ntBASIC0.41□□□□□ -2.34
TRAM1L1Q8N609 RNU6-1067P-201ENST00000384752 107 ntBASIC0.41□□□□□ -2.34
TRAM1L1Q8N609 DEFB108C-201ENST00000400154 252 ntBASIC0.41□□□□□ -2.34
TRAM1L1Q8N609 ELOCP21-201ENST00000412558 336 ntBASIC0.41□□□□□ -2.34
TRAM1L1Q8N609 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.41□□□□□ -2.34
TRAM1L1Q8N609 AC090617.3-201ENST00000573670 475 ntBASIC0.41□□□□□ -2.34
TRAM1L1Q8N609 7SK.10-201ENST00000621414 298 ntBASIC0.41□□□□□ -2.34
TRAM1L1Q8N609 AC127459.3-201ENST00000624328 466 ntBASIC0.41□□□□□ -2.34
TRAM1L1Q8N609 MIR5087-201ENST00000635826 76 ntBASIC0.41□□□□□ -2.34
TRAM1L1Q8N609 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.4□□□□□ -2.34
TRAM1L1Q8N609 RNU6-1252P-201ENST00000363054 104 ntBASIC0.4□□□□□ -2.35
TRAM1L1Q8N609 Y_RNA.212-201ENST00000364177 102 ntBASIC0.4□□□□□ -2.35
TRAM1L1Q8N609 RNU6-1042P-201ENST00000384204 107 ntBASIC0.4□□□□□ -2.35
TRAM1L1Q8N609 Y_RNA.533-201ENST00000384596 114 ntBASIC0.4□□□□□ -2.35
TRAM1L1Q8N609 MIR15B-201ENST00000385045 98 ntBASIC0.4□□□□□ -2.35
TRAM1L1Q8N609 RNA5SP193-201ENST00000410353 107 ntBASIC0.4□□□□□ -2.35
TRAM1L1Q8N609 Y_RNA.615-201ENST00000410769 117 ntBASIC0.4□□□□□ -2.35
TRAM1L1Q8N609 AC092423.1-201ENST00000430165 186 ntBASIC0.4□□□□□ -2.35
TRAM1L1Q8N609 UQCRBP2-201ENST00000447827 297 ntBASIC0.4□□□□□ -2.35
TRAM1L1Q8N609 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.4□□□□□ -2.35
TRAM1L1Q8N609 AC067940.1-201ENST00000458411 300 ntBASIC0.4□□□□□ -2.35
TRAM1L1Q8N609 AC074133.1-201ENST00000515696 183 ntBASIC0.4□□□□□ -2.35
TRAM1L1Q8N609 RN7SKP164-201ENST00000516138 266 ntBASIC0.4□□□□□ -2.35
TRAM1L1Q8N609 Y_RNA.706-201ENST00000516933 99 ntBASIC0.4□□□□□ -2.35
TRAM1L1Q8N609 SNORA74.3-201ENST00000517108 154 ntBASIC0.4□□□□□ -2.35
TRAM1L1Q8N609 AL512360.1-201ENST00000555346 234 ntBASIC0.4□□□□□ -2.35
TRAM1L1Q8N609 AC006362.1-201ENST00000567392 174 ntBASIC0.4□□□□□ -2.35
TRAM1L1Q8N609 AL162413.1-201ENST00000603198 110 ntBASIC0.4□□□□□ -2.35
TRAM1L1Q8N609 AC100812.1-201ENST00000607622 580 ntBASIC0.4□□□□□ -2.35
TRAM1L1Q8N609 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.4□□□□□ -2.35
TRAM1L1Q8N609 AC124864.2-201ENST00000624736 186 ntBASIC0.4□□□□□ -2.35
TRAM1L1Q8N609 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
TRAM1L1Q8N609 Y_RNA.256-201ENST00000364594 104 ntBASIC0.39□□□□□ -2.35
TRAM1L1Q8N609 RNU6-1237P-201ENST00000384777 107 ntBASIC0.39□□□□□ -2.35
TRAM1L1Q8N609 MIR598-201ENST00000384868 97 ntBASIC0.39□□□□□ -2.35
TRAM1L1Q8N609 MIR329-1-201ENST00000385028 80 ntBASIC0.39□□□□□ -2.35
TRAM1L1Q8N609 RNU1-119P-201ENST00000391122 165 ntBASIC0.39□□□□□ -2.35
TRAM1L1Q8N609 RNU6-1001P-201ENST00000411265 100 ntBASIC0.39□□□□□ -2.35
TRAM1L1Q8N609 AC244098.3-201ENST00000424803 96 ntBASIC0.39□□□□□ -2.35
TRAM1L1Q8N609 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.39□□□□□ -2.35
TRAM1L1Q8N609 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.39□□□□□ -2.35
TRAM1L1Q8N609 RN7SKP12-201ENST00000516275 143 ntBASIC0.39□□□□□ -2.35
TRAM1L1Q8N609 RNU11-2P-201ENST00000516898 142 ntBASIC0.39□□□□□ -2.35
TRAM1L1Q8N609 MIR3672-201ENST00000584290 82 ntBASIC0.39□□□□□ -2.35
TRAM1L1Q8N609 MIR4762-201ENST00000585261 75 ntBASIC0.39□□□□□ -2.35
TRAM1L1Q8N609 AC125232.2-201ENST00000592457 143 ntBASIC0.39□□□□□ -2.35
TRAM1L1Q8N609 Z83818.1-201ENST00000603584 150 ntBASIC0.39□□□□□ -2.35
TRAM1L1Q8N609 U6.115-201ENST00000636045 103 ntBASIC0.39□□□□□ -2.35
TRAM1L1Q8N609 RNU6-222P-201ENST00000362438 107 ntBASIC0.38□□□□□ -2.35
TRAM1L1Q8N609 RNU6-908P-201ENST00000410160 94 ntBASIC0.38□□□□□ -2.35
TRAM1L1Q8N609 PIGPP3-201ENST00000425307 415 ntBASIC0.38□□□□□ -2.35
TRAM1L1Q8N609 PCNPP5-201ENST00000452246 481 ntBASIC0.38□□□□□ -2.35
TRAM1L1Q8N609 AC114811.1-201ENST00000507207 168 ntBASIC0.38□□□□□ -2.35
TRAM1L1Q8N609 RNU4-57P-201ENST00000515980 135 ntBASIC0.38□□□□□ -2.35
TRAM1L1Q8N609 RNU6-1281P-201ENST00000516223 105 ntBASIC0.38□□□□□ -2.35
TRAM1L1Q8N609 AC023442.1-201ENST00000531247 422 ntBASIC0.38□□□□□ -2.35
TRAM1L1Q8N609 AC243829.6-201ENST00000612652 106 ntBASIC0.38□□□□□ -2.35
TRAM1L1Q8N609 AL589743.1-201ENST00000551932 2712 ntBASIC0.37□□□□□ -2.35
TRAM1L1Q8N609 RNU6-259P-201ENST00000383999 107 ntBASIC0.37□□□□□ -2.35
TRAM1L1Q8N609 Y_RNA.414-201ENST00000384011 101 ntBASIC0.37□□□□□ -2.35
TRAM1L1Q8N609 SNORA50A-201ENST00000384225 134 ntBASIC0.37□□□□□ -2.35
TRAM1L1Q8N609 RNU6-1297P-201ENST00000384415 104 ntBASIC0.37□□□□□ -2.35
TRAM1L1Q8N609 RNU6-1105P-201ENST00000384774 107 ntBASIC0.37□□□□□ -2.35
TRAM1L1Q8N609 MIR520C-201ENST00000385005 87 ntBASIC0.37□□□□□ -2.35
TRAM1L1Q8N609 SNORD111-201ENST00000408139 94 ntBASIC0.37□□□□□ -2.35
TRAM1L1Q8N609 MIR1298-201ENST00000408783 112 ntBASIC0.37□□□□□ -2.35
TRAM1L1Q8N609 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.37□□□□□ -2.35
TRAM1L1Q8N609 EIF1P2-201ENST00000428233 350 ntBASIC0.37□□□□□ -2.35
TRAM1L1Q8N609 AC019235.1-201ENST00000503847 207 ntBASIC0.37□□□□□ -2.35
TRAM1L1Q8N609 RNU7-41P-201ENST00000515917 61 ntBASIC0.37□□□□□ -2.35
TRAM1L1Q8N609 AC036111.3-201ENST00000526389 112 ntBASIC0.37□□□□□ -2.35
TRAM1L1Q8N609 OSBPL9P5-201ENST00000542581 171 ntBASIC0.37□□□□□ -2.35
TRAM1L1Q8N609 MIR4273-201ENST00000582824 84 ntBASIC0.37□□□□□ -2.35
TRAM1L1Q8N609 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
TRAM1L1Q8N609 Y_RNA.118-201ENST00000363300 101 ntBASIC0.36□□□□□ -2.35
TRAM1L1Q8N609 SNORD14.1-201ENST00000365609 90 ntBASIC0.36□□□□□ -2.35
TRAM1L1Q8N609 AC117470.1-201ENST00000381974 330 ntBASIC0.36□□□□□ -2.35
TRAM1L1Q8N609 SNORD116-11-201ENST00000383882 92 ntBASIC0.36□□□□□ -2.35
TRAM1L1Q8N609 RNU6-1145P-201ENST00000384246 107 ntBASIC0.36□□□□□ -2.35
TRAM1L1Q8N609 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
TRAM1L1Q8N609 AC244023.1-201ENST00000426884 112 ntBASIC0.36□□□□□ -2.35
TRAM1L1Q8N609 RPS20P10-201ENST00000451209 253 ntBASIC0.36□□□□□ -2.35
TRAM1L1Q8N609 RNU7-43P-201ENST00000516554 64 ntBASIC0.36□□□□□ -2.35
TRAM1L1Q8N609 NBR2-204ENST00000587322 63 ntBASIC0.36□□□□□ -2.35
TRAM1L1Q8N609 AC242498.1-201ENST00000604134 111 ntBASIC0.36□□□□□ -2.35
TRAM1L1Q8N609 AC104260.1-201ENST00000616660 539 ntBASIC0.36□□□□□ -2.35
TRAM1L1Q8N609 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.36□□□□□ -2.35
TRAM1L1Q8N609 AC243994.1-201ENST00000618627 109 ntBASIC0.36□□□□□ -2.35
TRAM1L1Q8N609 AC078883.4-201ENST00000623218 367 ntBASIC0.36□□□□□ -2.35
TRAM1L1Q8N609 MIR3974-201ENST00000637126 96 ntBASIC0.36□□□□□ -2.35
TRAM1L1Q8N609 Y_RNA.106-201ENST00000363189 100 ntBASIC0.35□□□□□ -2.35
TRAM1L1Q8N609 SNORA25.3-201ENST00000363205 127 ntBASIC0.35□□□□□ -2.35
TRAM1L1Q8N609 SNORD68-201ENST00000363214 84 ntBASIC0.35□□□□□ -2.35
TRAM1L1Q8N609 Y_RNA.361-201ENST00000365515 120 ntBASIC0.35□□□□□ -2.35
TRAM1L1Q8N609 VTRNA1-3-201ENST00000365645 89 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms