Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RNU4-73P-201ENST00000363164 141 ntBASIC1.19□□□□□ -2.22
C9orf40Q8IXQ3 Y_RNA.338-201ENST00000365320 114 ntBASIC1.19□□□□□ -2.22
C9orf40Q8IXQ3 RNU6-708P-201ENST00000384217 107 ntBASIC1.19□□□□□ -2.22
C9orf40Q8IXQ3 RNU6-376P-201ENST00000384731 106 ntBASIC1.19□□□□□ -2.22
C9orf40Q8IXQ3 MIR150-201ENST00000385048 84 ntBASIC1.19□□□□□ -2.22
C9orf40Q8IXQ3 MIR513A1-201ENST00000385138 129 ntBASIC1.19□□□□□ -2.22
C9orf40Q8IXQ3 MT-TD-201ENST00000387419 68 ntBASIC1.19□□□□□ -2.22
C9orf40Q8IXQ3 MRPL35P1-201ENST00000404272 572 ntBASIC1.19□□□□□ -2.22
C9orf40Q8IXQ3 AF228730.4-201ENST00000421457 183 ntBASIC1.19□□□□□ -2.22
C9orf40Q8IXQ3 MTND4LP11-201ENST00000422184 280 ntBASIC1.19□□□□□ -2.22
C9orf40Q8IXQ3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.19□□□□□ -2.22
C9orf40Q8IXQ3 AL137792.2-201ENST00000443484 235 ntBASIC1.19□□□□□ -2.22
C9orf40Q8IXQ3 AC245517.4-201ENST00000448601 281 ntBASIC1.19□□□□□ -2.22
C9orf40Q8IXQ3 CHEK2P4-201ENST00000450340 246 ntBASIC1.19□□□□□ -2.22
C9orf40Q8IXQ3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.19□□□□□ -2.22
C9orf40Q8IXQ3 AL163540.1-201ENST00000485382 386 ntBASIC1.19□□□□□ -2.22
C9orf40Q8IXQ3 RNA5SP445-201ENST00000515889 115 ntBASIC1.19□□□□□ -2.22
C9orf40Q8IXQ3 Y_RNA.661-201ENST00000516003 99 ntBASIC1.19□□□□□ -2.22
C9orf40Q8IXQ3 AC019176.1-201ENST00000518519 225 ntBASIC1.19□□□□□ -2.22
C9orf40Q8IXQ3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.19□□□□□ -2.22
C9orf40Q8IXQ3 MIR4659A-201ENST00000580269 81 ntBASIC1.19□□□□□ -2.22
C9orf40Q8IXQ3 AL390123.1-201ENST00000603216 237 ntBASIC1.19□□□□□ -2.22
C9orf40Q8IXQ3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.19□□□□□ -2.22
C9orf40Q8IXQ3 AL157834.3-201ENST00000615543 103 ntBASIC1.19□□□□□ -2.22
C9orf40Q8IXQ3 AC011476.5-201ENST00000615594 130 ntBASIC1.19□□□□□ -2.22
C9orf40Q8IXQ3 AL353770.2-201ENST00000620024 78 ntBASIC1.19□□□□□ -2.22
C9orf40Q8IXQ3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
C9orf40Q8IXQ3 Y_RNA.27-201ENST00000362540 103 ntBASIC1.18□□□□□ -2.22
C9orf40Q8IXQ3 SNORD33-201ENST00000362761 85 ntBASIC1.18□□□□□ -2.22
C9orf40Q8IXQ3 Y_RNA.124-201ENST00000363339 93 ntBASIC1.18□□□□□ -2.22
C9orf40Q8IXQ3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.18□□□□□ -2.22
C9orf40Q8IXQ3 AL034345.1-201ENST00000407768 123 ntBASIC1.18□□□□□ -2.22
C9orf40Q8IXQ3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.18□□□□□ -2.22
C9orf40Q8IXQ3 RPL23AP36-201ENST00000413895 458 ntBASIC1.18□□□□□ -2.22
C9orf40Q8IXQ3 SDAD1P3-201ENST00000427380 333 ntBASIC1.18□□□□□ -2.22
C9orf40Q8IXQ3 AC091021.1-201ENST00000468051 388 ntBASIC1.18□□□□□ -2.22
C9orf40Q8IXQ3 AC108729.3-201ENST00000513484 108 ntBASIC1.18□□□□□ -2.22
C9orf40Q8IXQ3 RNU6-1278P-201ENST00000516130 107 ntBASIC1.18□□□□□ -2.22
C9orf40Q8IXQ3 RNU2-12P-201ENST00000517216 168 ntBASIC1.18□□□□□ -2.22
C9orf40Q8IXQ3 AC008269.2-201ENST00000561915 1105 ntBASIC1.18□□□□□ -2.22
C9orf40Q8IXQ3 AC055872.1-201ENST00000570978 278 ntBASIC1.18□□□□□ -2.22
C9orf40Q8IXQ3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.18□□□□□ -2.22
C9orf40Q8IXQ3 MIR3937-201ENST00000580135 106 ntBASIC1.18□□□□□ -2.22
C9orf40Q8IXQ3 AC005176.2-201ENST00000596933 147 ntBASIC1.18□□□□□ -2.22
C9orf40Q8IXQ3 AC006380.1-201ENST00000603598 186 ntBASIC1.18□□□□□ -2.22
C9orf40Q8IXQ3 AL021879.1-201ENST00000611756 288 ntBASIC1.18□□□□□ -2.22
C9orf40Q8IXQ3 AC104985.2-201ENST00000620598 500 ntBASIC1.18□□□□□ -2.22
C9orf40Q8IXQ3 AC127459.3-201ENST00000624328 466 ntBASIC1.18□□□□□ -2.22
C9orf40Q8IXQ3 MIR4272-201ENST00000635924 64 ntBASIC1.18□□□□□ -2.22
C9orf40Q8IXQ3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.18□□□□□ -2.22
C9orf40Q8IXQ3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
C9orf40Q8IXQ3 RNU4-79P-201ENST00000362764 141 ntBASIC1.17□□□□□ -2.22
C9orf40Q8IXQ3 Y_RNA.101-201ENST00000363154 102 ntBASIC1.17□□□□□ -2.22
C9orf40Q8IXQ3 RNU6-626P-201ENST00000363354 107 ntBASIC1.17□□□□□ -2.22
C9orf40Q8IXQ3 SNORD115-30-201ENST00000364117 82 ntBASIC1.17□□□□□ -2.22
C9orf40Q8IXQ3 RNA5SP259-201ENST00000365541 109 ntBASIC1.17□□□□□ -2.22
C9orf40Q8IXQ3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.17□□□□□ -2.22
C9orf40Q8IXQ3 RNU6-20P-201ENST00000384106 107 ntBASIC1.17□□□□□ -2.22
C9orf40Q8IXQ3 Y_RNA.496-201ENST00000384444 101 ntBASIC1.17□□□□□ -2.22
C9orf40Q8IXQ3 AC027119.1-201ENST00000440877 241 ntBASIC1.17□□□□□ -2.22
C9orf40Q8IXQ3 STAG3L5P-204ENST00000443759 179 ntBASIC1.17□□□□□ -2.22
C9orf40Q8IXQ3 RNU6-976P-201ENST00000516086 111 ntBASIC1.17□□□□□ -2.22
C9orf40Q8IXQ3 RNU6-902P-201ENST00000517212 91 ntBASIC1.17□□□□□ -2.22
C9orf40Q8IXQ3 SUMO2P16-201ENST00000519475 264 ntBASIC1.17□□□□□ -2.22
C9orf40Q8IXQ3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.17□□□□□ -2.22
C9orf40Q8IXQ3 AL162424.1-201ENST00000602325 221 ntBASIC1.17□□□□□ -2.22
C9orf40Q8IXQ3 AC092447.9-201ENST00000603395 144 ntBASIC1.17□□□□□ -2.22
C9orf40Q8IXQ3 AP001485.1-201ENST00000604799 199 ntBASIC1.17□□□□□ -2.22
C9orf40Q8IXQ3 AL359821.1-201ENST00000605519 182 ntBASIC1.17□□□□□ -2.22
C9orf40Q8IXQ3 LARP7P1-201ENST00000605576 316 ntBASIC1.17□□□□□ -2.22
C9orf40Q8IXQ3 AC040896.1-201ENST00000613819 479 ntBASIC1.17□□□□□ -2.22
C9orf40Q8IXQ3 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.17□□□□□ -2.22
C9orf40Q8IXQ3 AC091925.1-201ENST00000623204 462 ntBASIC1.17□□□□□ -2.22
C9orf40Q8IXQ3 U6.92-201ENST00000636464 89 ntBASIC1.17□□□□□ -2.22
C9orf40Q8IXQ3 SNORD114-7-201ENST00000362520 77 ntBASIC1.16□□□□□ -2.22
C9orf40Q8IXQ3 Y_RNA.252-201ENST00000364556 101 ntBASIC1.16□□□□□ -2.22
C9orf40Q8IXQ3 Y_RNA.267-201ENST00000364679 109 ntBASIC1.16□□□□□ -2.22
C9orf40Q8IXQ3 RNU6-117P-201ENST00000365415 107 ntBASIC1.16□□□□□ -2.22
C9orf40Q8IXQ3 MIR562-201ENST00000384894 95 ntBASIC1.16□□□□□ -2.22
C9orf40Q8IXQ3 SNORA12.1-201ENST00000390873 148 ntBASIC1.16□□□□□ -2.22
C9orf40Q8IXQ3 Y_RNA.579-201ENST00000390939 94 ntBASIC1.16□□□□□ -2.22
C9orf40Q8IXQ3 RNU2-54P-201ENST00000410299 190 ntBASIC1.16□□□□□ -2.22
C9orf40Q8IXQ3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.16□□□□□ -2.22
C9orf40Q8IXQ3 RPS27P16-201ENST00000425758 201 ntBASIC1.16□□□□□ -2.22
C9orf40Q8IXQ3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.16□□□□□ -2.22
C9orf40Q8IXQ3 PGBD4P5-201ENST00000445958 426 ntBASIC1.16□□□□□ -2.22
C9orf40Q8IXQ3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.16□□□□□ -2.22
C9orf40Q8IXQ3 RNU6-341P-201ENST00000516973 96 ntBASIC1.16□□□□□ -2.22
C9orf40Q8IXQ3 AC091178.2-201ENST00000584401 117 ntBASIC1.16□□□□□ -2.22
C9orf40Q8IXQ3 SNORA28-201ENST00000606769 126 ntBASIC1.16□□□□□ -2.22
C9orf40Q8IXQ3 AC240442.1-201ENST00000616055 283 ntBASIC1.16□□□□□ -2.22
C9orf40Q8IXQ3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
C9orf40Q8IXQ3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
C9orf40Q8IXQ3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.16□□□□□ -2.22
C9orf40Q8IXQ3 Y_RNA.5-201ENST00000362334 102 ntBASIC1.15□□□□□ -2.23
C9orf40Q8IXQ3 Y_RNA.39-201ENST00000362620 98 ntBASIC1.15□□□□□ -2.23
C9orf40Q8IXQ3 Y_RNA.315-201ENST00000365117 102 ntBASIC1.15□□□□□ -2.23
C9orf40Q8IXQ3 Y_RNA.361-201ENST00000365515 120 ntBASIC1.15□□□□□ -2.23
C9orf40Q8IXQ3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.15□□□□□ -2.23
C9orf40Q8IXQ3 SNORA70.12-201ENST00000516084 153 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 211.4 ms