Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.06□□□□□ -2.08
SYNE3Q6ZMZ3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.06□□□□□ -2.08
SYNE3Q6ZMZ3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.06□□□□□ -2.08
SYNE3Q6ZMZ3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.06□□□□□ -2.08
SYNE3Q6ZMZ3 AC024614.2-201ENST00000577584 372 ntBASIC2.06□□□□□ -2.08
SYNE3Q6ZMZ3 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.06□□□□□ -2.08
SYNE3Q6ZMZ3 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.06□□□□□ -2.08
SYNE3Q6ZMZ3 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.06□□□□□ -2.08
SYNE3Q6ZMZ3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SYNE3Q6ZMZ3 ZNF702P-202ENST00000434269 1966 ntBASIC2.05□□□□□ -2.08
SYNE3Q6ZMZ3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.05□□□□□ -2.08
SYNE3Q6ZMZ3 Y_RNA.162-201ENST00000363683 102 ntBASIC2.05□□□□□ -2.08
SYNE3Q6ZMZ3 Y_RNA.331-201ENST00000365267 102 ntBASIC2.05□□□□□ -2.08
SYNE3Q6ZMZ3 MTND2P23-201ENST00000422990 651 ntBASIC2.05□□□□□ -2.08
SYNE3Q6ZMZ3 AC097462.1-201ENST00000514125 324 ntBASIC2.05□□□□□ -2.08
SYNE3Q6ZMZ3 RNU6-327P-201ENST00000516270 127 ntBASIC2.05□□□□□ -2.08
SYNE3Q6ZMZ3 MIR4438-201ENST00000585271 93 ntBASIC2.05□□□□□ -2.08
SYNE3Q6ZMZ3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.05□□□□□ -2.08
SYNE3Q6ZMZ3 MIR6845-201ENST00000613182 61 ntBASIC2.05□□□□□ -2.08
SYNE3Q6ZMZ3 AL359075.3-201ENST00000613288 217 ntBASIC2.05□□□□□ -2.08
SYNE3Q6ZMZ3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
SYNE3Q6ZMZ3 Y_RNA.19-201ENST00000362462 99 ntBASIC2.04□□□□□ -2.08
SYNE3Q6ZMZ3 Y_RNA.26-201ENST00000362539 101 ntBASIC2.04□□□□□ -2.08
SYNE3Q6ZMZ3 Y_RNA.124-201ENST00000363339 93 ntBASIC2.04□□□□□ -2.08
SYNE3Q6ZMZ3 RNU6-102P-201ENST00000384485 104 ntBASIC2.04□□□□□ -2.08
SYNE3Q6ZMZ3 RNU6-296P-201ENST00000384608 107 ntBASIC2.04□□□□□ -2.08
SYNE3Q6ZMZ3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.04□□□□□ -2.08
SYNE3Q6ZMZ3 AC069257.2-201ENST00000441819 155 ntBASIC2.04□□□□□ -2.08
SYNE3Q6ZMZ3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.04□□□□□ -2.08
SYNE3Q6ZMZ3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.04□□□□□ -2.08
SYNE3Q6ZMZ3 RNA5SP20-201ENST00000515976 84 ntBASIC2.04□□□□□ -2.08
SYNE3Q6ZMZ3 SNORA70.12-201ENST00000516084 153 ntBASIC2.04□□□□□ -2.08
SYNE3Q6ZMZ3 RNU7-99P-201ENST00000516271 62 ntBASIC2.04□□□□□ -2.08
SYNE3Q6ZMZ3 RNU6-1045P-201ENST00000516321 107 ntBASIC2.04□□□□□ -2.08
SYNE3Q6ZMZ3 RNU7-110P-201ENST00000516891 62 ntBASIC2.04□□□□□ -2.08
SYNE3Q6ZMZ3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.04□□□□□ -2.08
SYNE3Q6ZMZ3 MIR5094-201ENST00000578766 85 ntBASIC2.04□□□□□ -2.08
SYNE3Q6ZMZ3 AC008737.2-201ENST00000599446 118 ntBASIC2.04□□□□□ -2.08
SYNE3Q6ZMZ3 snoU2_19.2-201ENST00000363024 80 ntBASIC2.03□□□□□ -2.08
SYNE3Q6ZMZ3 Y_RNA.136-201ENST00000363444 102 ntBASIC2.03□□□□□ -2.08
SYNE3Q6ZMZ3 SNORD113-8-201ENST00000363497 74 ntBASIC2.03□□□□□ -2.08
SYNE3Q6ZMZ3 RNU6-112P-201ENST00000363599 104 ntBASIC2.03□□□□□ -2.08
SYNE3Q6ZMZ3 Y_RNA.286-201ENST00000364813 102 ntBASIC2.03□□□□□ -2.08
SYNE3Q6ZMZ3 RNU6-806P-201ENST00000365147 105 ntBASIC2.03□□□□□ -2.08
SYNE3Q6ZMZ3 RNA5SP467-201ENST00000391274 118 ntBASIC2.03□□□□□ -2.08
SYNE3Q6ZMZ3 RNU4-30P-201ENST00000410245 143 ntBASIC2.03□□□□□ -2.08
SYNE3Q6ZMZ3 AC010154.1-201ENST00000425857 269 ntBASIC2.03□□□□□ -2.08
SYNE3Q6ZMZ3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.03□□□□□ -2.08
SYNE3Q6ZMZ3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.03□□□□□ -2.08
SYNE3Q6ZMZ3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.03□□□□□ -2.08
SYNE3Q6ZMZ3 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
SYNE3Q6ZMZ3 RNU4-90P-201ENST00000362773 141 ntBASIC2.02□□□□□ -2.09
SYNE3Q6ZMZ3 Y_RNA.133-201ENST00000363428 110 ntBASIC2.02□□□□□ -2.09
SYNE3Q6ZMZ3 RNU6-21P-201ENST00000384710 107 ntBASIC2.02□□□□□ -2.09
SYNE3Q6ZMZ3 EBAG9P1-201ENST00000418955 543 ntBASIC2.02□□□□□ -2.09
SYNE3Q6ZMZ3 RPS27P22-201ENST00000478056 241 ntBASIC2.02□□□□□ -2.09
SYNE3Q6ZMZ3 AC010409.1-201ENST00000487382 476 ntBASIC2.02□□□□□ -2.09
SYNE3Q6ZMZ3 RPL36AP21-201ENST00000490372 323 ntBASIC2.02□□□□□ -2.09
SYNE3Q6ZMZ3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.02□□□□□ -2.09
SYNE3Q6ZMZ3 AP003733.2-201ENST00000529409 171 ntBASIC2.02□□□□□ -2.09
SYNE3Q6ZMZ3 AC023157.2-201ENST00000540596 141 ntBASIC2.02□□□□□ -2.09
SYNE3Q6ZMZ3 AC084364.2-201ENST00000546924 395 ntBASIC2.02□□□□□ -2.09
SYNE3Q6ZMZ3 MIR4299-201ENST00000577899 72 ntBASIC2.02□□□□□ -2.09
SYNE3Q6ZMZ3 AL773524.1-201ENST00000614065 229 ntBASIC2.02□□□□□ -2.09
SYNE3Q6ZMZ3 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.02□□□□□ -2.09
SYNE3Q6ZMZ3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
SYNE3Q6ZMZ3 AC010615.1-201ENST00000594254 1764 ntBASIC2.01□□□□□ -2.09
SYNE3Q6ZMZ3 RNU6-505P-201ENST00000384427 107 ntBASIC2.01□□□□□ -2.09
SYNE3Q6ZMZ3 Y_RNA.574-201ENST00000384766 95 ntBASIC2.01□□□□□ -2.09
SYNE3Q6ZMZ3 RNU6-1105P-201ENST00000384774 107 ntBASIC2.01□□□□□ -2.09
SYNE3Q6ZMZ3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
SYNE3Q6ZMZ3 RNA5SP212-201ENST00000391223 107 ntBASIC2.01□□□□□ -2.09
SYNE3Q6ZMZ3 SNORA26.9-201ENST00000391322 122 ntBASIC2.01□□□□□ -2.09
SYNE3Q6ZMZ3 RPL21P38-201ENST00000418090 167 ntBASIC2.01□□□□□ -2.09
SYNE3Q6ZMZ3 AC244636.1-201ENST00000421152 228 ntBASIC2.01□□□□□ -2.09
SYNE3Q6ZMZ3 AL118496.2-201ENST00000448300 230 ntBASIC2.01□□□□□ -2.09
SYNE3Q6ZMZ3 RPS27P1-201ENST00000450552 247 ntBASIC2.01□□□□□ -2.09
SYNE3Q6ZMZ3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.01□□□□□ -2.09
SYNE3Q6ZMZ3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2□□□□□ -2.09
SYNE3Q6ZMZ3 Y_RNA.329-201ENST00000365209 107 ntBASIC2□□□□□ -2.09
SYNE3Q6ZMZ3 RNU6-290P-201ENST00000365212 101 ntBASIC2□□□□□ -2.09
SYNE3Q6ZMZ3 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2□□□□□ -2.09
SYNE3Q6ZMZ3 MTATP8P1-201ENST00000467115 207 ntBASIC2□□□□□ -2.09
SYNE3Q6ZMZ3 HMGN1P10-201ENST00000474557 553 ntBASIC2□□□□□ -2.09
SYNE3Q6ZMZ3 SNORA25.15-201ENST00000516487 89 ntBASIC2□□□□□ -2.09
SYNE3Q6ZMZ3 RNU1-142P-201ENST00000516682 145 ntBASIC2□□□□□ -2.09
SYNE3Q6ZMZ3 RNU6-250P-201ENST00000516958 103 ntBASIC2□□□□□ -2.09
SYNE3Q6ZMZ3 MIR502-201ENST00000606349 86 ntBASIC2□□□□□ -2.09
SYNE3Q6ZMZ3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2□□□□□ -2.09
SYNE3Q6ZMZ3 RNA5SP276-201ENST00000362580 94 ntBASIC1.99□□□□□ -2.09
SYNE3Q6ZMZ3 Y_RNA.64-201ENST00000362845 102 ntBASIC1.99□□□□□ -2.09
SYNE3Q6ZMZ3 SNORD48-201ENST00000364953 64 ntBASIC1.99□□□□□ -2.09
SYNE3Q6ZMZ3 RNU6-407P-201ENST00000365280 104 ntBASIC1.99□□□□□ -2.09
SYNE3Q6ZMZ3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.99□□□□□ -2.09
SYNE3Q6ZMZ3 Y_RNA.383-201ENST00000383855 97 ntBASIC1.99□□□□□ -2.09
SYNE3Q6ZMZ3 Y_RNA.418-201ENST00000384029 102 ntBASIC1.99□□□□□ -2.09
SYNE3Q6ZMZ3 Y_RNA.541-201ENST00000384640 113 ntBASIC1.99□□□□□ -2.09
SYNE3Q6ZMZ3 MIR520A-201ENST00000384862 85 ntBASIC1.99□□□□□ -2.09
SYNE3Q6ZMZ3 RNU6-710P-201ENST00000410424 105 ntBASIC1.99□□□□□ -2.09
SYNE3Q6ZMZ3 AL163195.1-201ENST00000496941 348 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 150.4 ms