Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 AC010608.3-201ENST00000625048 527 ntBASIC-1.06□□□□□ -2.58
NUP188Q5SRE5 RNU5A-6P-201ENST00000384136 116 ntBASIC-1.06□□□□□ -2.58
NUP188Q5SRE5 Y_RNA.537-201ENST00000384626 109 ntBASIC-1.06□□□□□ -2.58
NUP188Q5SRE5 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-1.06□□□□□ -2.58
NUP188Q5SRE5 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-1.06□□□□□ -2.58
NUP188Q5SRE5 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-1.06□□□□□ -2.58
NUP188Q5SRE5 SCARNA17-201ENST00000516183 144 ntBASIC-1.06□□□□□ -2.58
NUP188Q5SRE5 RNU6-551P-201ENST00000516661 103 ntBASIC-1.06□□□□□ -2.58
NUP188Q5SRE5 RNU6-323P-201ENST00000521915 107 ntBASIC-1.06□□□□□ -2.58
NUP188Q5SRE5 AC138749.4-201ENST00000563970 127 ntBASIC-1.06□□□□□ -2.58
NUP188Q5SRE5 MIR3118-1-201ENST00000581787 76 ntBASIC-1.06□□□□□ -2.58
NUP188Q5SRE5 RNU6-811P-201ENST00000384069 107 ntBASIC-1.07□□□□□ -2.58
NUP188Q5SRE5 Y_RNA.477-201ENST00000384352 108 ntBASIC-1.07□□□□□ -2.58
NUP188Q5SRE5 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.07□□□□□ -2.58
NUP188Q5SRE5 SNORA75.1-201ENST00000391130 148 ntBASIC-1.07□□□□□ -2.58
NUP188Q5SRE5 AC092447.3-201ENST00000426027 686 ntBASIC-1.07□□□□□ -2.58
NUP188Q5SRE5 CALM2P2-201ENST00000428512 440 ntBASIC-1.07□□□□□ -2.58
NUP188Q5SRE5 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-1.07□□□□□ -2.58
NUP188Q5SRE5 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-1.07□□□□□ -2.58
NUP188Q5SRE5 RNU6-897P-201ENST00000517135 105 ntBASIC-1.07□□□□□ -2.58
NUP188Q5SRE5 AC023442.1-201ENST00000531247 422 ntBASIC-1.07□□□□□ -2.58
NUP188Q5SRE5 AC123904.2-201ENST00000548059 300 ntBASIC-1.07□□□□□ -2.58
NUP188Q5SRE5 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-1.07□□□□□ -2.58
NUP188Q5SRE5 AC137590.2-201ENST00000619709 240 ntBASIC-1.07□□□□□ -2.58
NUP188Q5SRE5 RNU6-792P-201ENST00000363490 107 ntBASIC-1.08□□□□□ -2.58
NUP188Q5SRE5 RNA5SP192-201ENST00000364404 120 ntBASIC-1.08□□□□□ -2.58
NUP188Q5SRE5 RNU6-1106P-201ENST00000390845 107 ntBASIC-1.08□□□□□ -2.58
NUP188Q5SRE5 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-1.08□□□□□ -2.58
NUP188Q5SRE5 MTND1P32-201ENST00000433043 938 ntBASIC-1.08□□□□□ -2.58
NUP188Q5SRE5 EPS15P1-201ENST00000448836 336 ntBASIC-1.08□□□□□ -2.58
NUP188Q5SRE5 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-1.08□□□□□ -2.58
NUP188Q5SRE5 AC073539.2-201ENST00000597113 165 ntBASIC-1.08□□□□□ -2.58
NUP188Q5SRE5 RNU1-29P-201ENST00000606574 126 ntBASIC-1.08□□□□□ -2.58
NUP188Q5SRE5 AL590491.3-201ENST00000610731 82 ntBASIC-1.08□□□□□ -2.58
NUP188Q5SRE5 AC022306.2-201ENST00000617563 647 ntBASIC-1.08□□□□□ -2.58
NUP188Q5SRE5 AC134878.1-201ENST00000619901 243 ntBASIC-1.08□□□□□ -2.58
NUP188Q5SRE5 MTCO3P19-201ENST00000415864 321 ntBASIC-1.09□□□□□ -2.58
NUP188Q5SRE5 AL390729.2-201ENST00000416137 156 ntBASIC-1.09□□□□□ -2.58
NUP188Q5SRE5 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-1.09□□□□□ -2.58
NUP188Q5SRE5 SUMO1P2-201ENST00000452524 304 ntBASIC-1.09□□□□□ -2.58
NUP188Q5SRE5 PRDX4P1-201ENST00000507189 574 ntBASIC-1.09□□□□□ -2.58
NUP188Q5SRE5 RNA5SP47-201ENST00000517230 109 ntBASIC-1.09□□□□□ -2.58
NUP188Q5SRE5 MIR4762-201ENST00000585261 75 ntBASIC-1.09□□□□□ -2.58
NUP188Q5SRE5 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-1.09□□□□□ -2.58
NUP188Q5SRE5 SNORA51.10-201ENST00000384418 136 ntBASIC-1.09□□□□□ -2.58
NUP188Q5SRE5 SNORA3B-201ENST00000391305 131 ntBASIC-1.09□□□□□ -2.58
NUP188Q5SRE5 RNU6-855P-201ENST00000410395 104 ntBASIC-1.09□□□□□ -2.58
NUP188Q5SRE5 SNORA27.4-201ENST00000516650 95 ntBASIC-1.09□□□□□ -2.58
NUP188Q5SRE5 AC018462.2-201ENST00000605375 395 ntBASIC-1.09□□□□□ -2.58
NUP188Q5SRE5 AC108747.1-201ENST00000609508 535 ntBASIC-1.09□□□□□ -2.58
NUP188Q5SRE5 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-1.09□□□□□ -2.58
NUP188Q5SRE5 RNU6-116P-201ENST00000384042 109 ntBASIC-1.1□□□□□ -2.59
NUP188Q5SRE5 SNORA24.1-201ENST00000384401 135 ntBASIC-1.1□□□□□ -2.59
NUP188Q5SRE5 SNORD28-201ENST00000384706 75 ntBASIC-1.1□□□□□ -2.59
NUP188Q5SRE5 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-1.1□□□□□ -2.59
NUP188Q5SRE5 AC109327.2-201ENST00000448339 378 ntBASIC-1.1□□□□□ -2.59
NUP188Q5SRE5 SCARNA18-201ENST00000459004 134 ntBASIC-1.1□□□□□ -2.59
NUP188Q5SRE5 RNA5SP20-201ENST00000515976 84 ntBASIC-1.1□□□□□ -2.59
NUP188Q5SRE5 RNU6-135P-201ENST00000516769 101 ntBASIC-1.1□□□□□ -2.59
NUP188Q5SRE5 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-1.1□□□□□ -2.59
NUP188Q5SRE5 AC072039.2-201ENST00000608883 439 ntBASIC-1.1□□□□□ -2.59
NUP188Q5SRE5 MIR8084-201ENST00000614105 89 ntBASIC-1.1□□□□□ -2.59
NUP188Q5SRE5 AC244669.1-204ENST00000621564 178 ntBASIC-1.1□□□□□ -2.59
NUP188Q5SRE5 AC091948.2-201ENST00000636510 279 ntBASIC-1.1□□□□□ -2.59
NUP188Q5SRE5 RNU6-723P-201ENST00000383973 107 ntBASIC-1.11□□□□□ -2.59
NUP188Q5SRE5 RNU6-245P-201ENST00000384020 107 ntBASIC-1.11□□□□□ -2.59
NUP188Q5SRE5 RNU6-376P-201ENST00000384731 106 ntBASIC-1.11□□□□□ -2.59
NUP188Q5SRE5 MIR570-201ENST00000384917 97 ntBASIC-1.11□□□□□ -2.59
NUP188Q5SRE5 MIR15B-201ENST00000385045 98 ntBASIC-1.11□□□□□ -2.59
NUP188Q5SRE5 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-1.11□□□□□ -2.59
NUP188Q5SRE5 AC079140.5-201ENST00000507882 310 ntBASIC-1.11□□□□□ -2.59
NUP188Q5SRE5 RNU6-1003P-201ENST00000517099 105 ntBASIC-1.11□□□□□ -2.59
NUP188Q5SRE5 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-1.11□□□□□ -2.59
NUP188Q5SRE5 MIR4324-201ENST00000584846 72 ntBASIC-1.11□□□□□ -2.59
NUP188Q5SRE5 AC097460.3-201ENST00000623099 442 ntBASIC-1.11□□□□□ -2.59
NUP188Q5SRE5 SCARNA4-201ENST00000629045 128 ntBASIC-1.11□□□□□ -2.59
NUP188Q5SRE5 RNU4-21P-201ENST00000362802 126 ntBASIC-1.12□□□□□ -2.59
NUP188Q5SRE5 SNORD56.2-201ENST00000363242 71 ntBASIC-1.12□□□□□ -2.59
NUP188Q5SRE5 Y_RNA.174-201ENST00000363781 105 ntBASIC-1.12□□□□□ -2.59
NUP188Q5SRE5 RNA5SP494-201ENST00000410653 129 ntBASIC-1.12□□□□□ -2.59
NUP188Q5SRE5 AC010598.1-201ENST00000510378 103 ntBASIC-1.12□□□□□ -2.59
NUP188Q5SRE5 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-1.12□□□□□ -2.59
NUP188Q5SRE5 MIR4677-201ENST00000584153 80 ntBASIC-1.12□□□□□ -2.59
NUP188Q5SRE5 SNORD11B-201ENST00000607707 90 ntBASIC-1.12□□□□□ -2.59
NUP188Q5SRE5 MIR6507-201ENST00000613630 70 ntBASIC-1.12□□□□□ -2.59
NUP188Q5SRE5 RNU6-827P-201ENST00000365553 106 ntBASIC-1.12□□□□□ -2.59
NUP188Q5SRE5 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.12□□□□□ -2.59
NUP188Q5SRE5 SNORD38B-201ENST00000384690 67 ntBASIC-1.12□□□□□ -2.59
NUP188Q5SRE5 MIR548L-201ENST00000408303 86 ntBASIC-1.12□□□□□ -2.59
NUP188Q5SRE5 RNU6-387P-201ENST00000411331 105 ntBASIC-1.12□□□□□ -2.59
NUP188Q5SRE5 snoU13.6-201ENST00000458785 104 ntBASIC-1.12□□□□□ -2.59
NUP188Q5SRE5 AC116562.3-201ENST00000506136 177 ntBASIC-1.12□□□□□ -2.59
NUP188Q5SRE5 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-1.12□□□□□ -2.59
NUP188Q5SRE5 RN7SKP19-201ENST00000516016 252 ntBASIC-1.12□□□□□ -2.59
NUP188Q5SRE5 SNORA31.14-201ENST00000516728 116 ntBASIC-1.12□□□□□ -2.59
NUP188Q5SRE5 FGF7P1-201ENST00000582820 288 ntBASIC-1.12□□□□□ -2.59
NUP188Q5SRE5 AC105081.1-201ENST00000617727 106 ntBASIC-1.12□□□□□ -2.59
NUP188Q5SRE5 AC068137.4-201ENST00000638485 296 ntBASIC-1.12□□□□□ -2.59
NUP188Q5SRE5 RNU5E-10P-201ENST00000363506 118 ntBASIC-1.13□□□□□ -2.59
NUP188Q5SRE5 RNU6-740P-201ENST00000364734 105 ntBASIC-1.13□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms