Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 RNU6-200P-201ENST00000364743 107 ntBASIC2.55□□□□□ -2
ATP13A4Q4VNC1 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.55□□□□□ -2
ATP13A4Q4VNC1 MIR1298-201ENST00000408783 112 ntBASIC2.55□□□□□ -2
ATP13A4Q4VNC1 SNORA11.4-201ENST00000408823 129 ntBASIC2.55□□□□□ -2
ATP13A4Q4VNC1 AL135786.1-201ENST00000415892 214 ntBASIC2.55□□□□□ -2
ATP13A4Q4VNC1 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.55□□□□□ -2
ATP13A4Q4VNC1 SNORA31.25-201ENST00000517242 134 ntBASIC2.55□□□□□ -2
ATP13A4Q4VNC1 AC024995.1-201ENST00000523014 93 ntBASIC2.55□□□□□ -2
ATP13A4Q4VNC1 AC130289.1-201ENST00000577321 73 ntBASIC2.55□□□□□ -2
ATP13A4Q4VNC1 MIR5692C2-201ENST00000577959 77 ntBASIC2.55□□□□□ -2
ATP13A4Q4VNC1 AC073413.2-201ENST00000604332 360 ntBASIC2.55□□□□□ -2
ATP13A4Q4VNC1 AC010297.1-201ENST00000623948 149 ntBASIC2.55□□□□□ -2
ATP13A4Q4VNC1 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ATP13A4Q4VNC1 AC131280.1-202ENST00000624067 4211 ntBASIC2.54□□□□□ -2
ATP13A4Q4VNC1 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ATP13A4Q4VNC1 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ATP13A4Q4VNC1 MIR6073-201ENST00000352083 89 ntBASIC2.54□□□□□ -2
ATP13A4Q4VNC1 SNORA33-201ENST00000363664 130 ntBASIC2.54□□□□□ -2
ATP13A4Q4VNC1 Y_RNA.199-201ENST00000364014 102 ntBASIC2.54□□□□□ -2
ATP13A4Q4VNC1 RNU4-13P-201ENST00000364019 141 ntBASIC2.54□□□□□ -2
ATP13A4Q4VNC1 U8.7-201ENST00000364940 136 ntBASIC2.54□□□□□ -2
ATP13A4Q4VNC1 RNU1-51P-201ENST00000365345 176 ntBASIC2.54□□□□□ -2
ATP13A4Q4VNC1 RNU6-1323P-201ENST00000384025 107 ntBASIC2.54□□□□□ -2
ATP13A4Q4VNC1 RNU6-136P-201ENST00000384663 107 ntBASIC2.54□□□□□ -2
ATP13A4Q4VNC1 RNA5SP323-201ENST00000391094 133 ntBASIC2.54□□□□□ -2
ATP13A4Q4VNC1 AL355497.1-201ENST00000406262 551 ntBASIC2.54□□□□□ -2
ATP13A4Q4VNC1 SNORD23.1-201ENST00000408212 104 ntBASIC2.54□□□□□ -2
ATP13A4Q4VNC1 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.54□□□□□ -2
ATP13A4Q4VNC1 HMGN2P3-201ENST00000433603 273 ntBASIC2.54□□□□□ -2
ATP13A4Q4VNC1 HMGN2P5-201ENST00000436882 273 ntBASIC2.54□□□□□ -2
ATP13A4Q4VNC1 RPS12P2-201ENST00000439728 269 ntBASIC2.54□□□□□ -2
ATP13A4Q4VNC1 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.54□□□□□ -2
ATP13A4Q4VNC1 HMGB3P3-201ENST00000510526 400 ntBASIC2.54□□□□□ -2
ATP13A4Q4VNC1 RNU7-115P-201ENST00000516433 55 ntBASIC2.54□□□□□ -2
ATP13A4Q4VNC1 RNA5SP148-201ENST00000516527 94 ntBASIC2.54□□□□□ -2
ATP13A4Q4VNC1 RNU7-193P-201ENST00000516723 65 ntBASIC2.54□□□□□ -2
ATP13A4Q4VNC1 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.54□□□□□ -2
ATP13A4Q4VNC1 U6.108-201ENST00000637764 58 ntBASIC2.54□□□□□ -2
ATP13A4Q4VNC1 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
ATP13A4Q4VNC1 Y_RNA.83-201ENST00000363005 113 ntBASIC2.53□□□□□ -2
ATP13A4Q4VNC1 Y_RNA.304-201ENST00000365011 112 ntBASIC2.53□□□□□ -2
ATP13A4Q4VNC1 RNU11-5P-201ENST00000391216 129 ntBASIC2.53□□□□□ -2
ATP13A4Q4VNC1 Y_RNA.626-201ENST00000411288 95 ntBASIC2.53□□□□□ -2
ATP13A4Q4VNC1 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.53□□□□□ -2
ATP13A4Q4VNC1 AC117454.1-201ENST00000491120 168 ntBASIC2.53□□□□□ -2
ATP13A4Q4VNC1 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.53□□□□□ -2
ATP13A4Q4VNC1 RPL23AP94-201ENST00000512518 302 ntBASIC2.53□□□□□ -2
ATP13A4Q4VNC1 RNU6-138P-201ENST00000515952 107 ntBASIC2.53□□□□□ -2
ATP13A4Q4VNC1 RNU7-116P-201ENST00000516940 62 ntBASIC2.53□□□□□ -2
ATP13A4Q4VNC1 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.53□□□□□ -2
ATP13A4Q4VNC1 AP003357.1-201ENST00000604497 148 ntBASIC2.53□□□□□ -2
ATP13A4Q4VNC1 AL137847.3-201ENST00000611521 109 ntBASIC2.53□□□□□ -2
ATP13A4Q4VNC1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.53□□□□□ -2
ATP13A4Q4VNC1 MIR548AY-201ENST00000617669 107 ntBASIC2.53□□□□□ -2
ATP13A4Q4VNC1 AL136360.1-201ENST00000503377 1900 ntBASIC2.52□□□□□ -2.01
ATP13A4Q4VNC1 SNORA8-201ENST00000384574 139 ntBASIC2.52□□□□□ -2.01
ATP13A4Q4VNC1 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.52□□□□□ -2.01
ATP13A4Q4VNC1 AC024405.2-202ENST00000532731 184 ntBASIC2.52□□□□□ -2.01
ATP13A4Q4VNC1 POLR3GP1-201ENST00000594073 261 ntBASIC2.52□□□□□ -2.01
ATP13A4Q4VNC1 MIR6817-201ENST00000615588 66 ntBASIC2.52□□□□□ -2.01
ATP13A4Q4VNC1 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
ATP13A4Q4VNC1 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.52□□□□□ -2.01
ATP13A4Q4VNC1 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.51□□□□□ -2.01
ATP13A4Q4VNC1 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
ATP13A4Q4VNC1 Y_RNA.262-201ENST00000364641 102 ntBASIC2.51□□□□□ -2.01
ATP13A4Q4VNC1 Y_RNA.274-201ENST00000364714 101 ntBASIC2.51□□□□□ -2.01
ATP13A4Q4VNC1 RNU6-907P-201ENST00000390924 102 ntBASIC2.51□□□□□ -2.01
ATP13A4Q4VNC1 SNORA11.2-201ENST00000408318 127 ntBASIC2.51□□□□□ -2.01
ATP13A4Q4VNC1 RPS26P45-201ENST00000471748 340 ntBASIC2.51□□□□□ -2.01
ATP13A4Q4VNC1 AL163195.1-201ENST00000496941 348 ntBASIC2.51□□□□□ -2.01
ATP13A4Q4VNC1 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.51□□□□□ -2.01
ATP13A4Q4VNC1 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.51□□□□□ -2.01
ATP13A4Q4VNC1 AL049779.4-201ENST00000604500 156 ntBASIC2.51□□□□□ -2.01
ATP13A4Q4VNC1 AL365265.1-201ENST00000621045 234 ntBASIC2.51□□□□□ -2.01
ATP13A4Q4VNC1 U4.3-201ENST00000621047 82 ntBASIC2.51□□□□□ -2.01
ATP13A4Q4VNC1 AC012640.5-201ENST00000623897 319 ntBASIC2.51□□□□□ -2.01
ATP13A4Q4VNC1 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
ATP13A4Q4VNC1 RNU6-1205P-201ENST00000363625 106 ntBASIC2.5□□□□□ -2.01
ATP13A4Q4VNC1 Y_RNA.297-201ENST00000364950 91 ntBASIC2.5□□□□□ -2.01
ATP13A4Q4VNC1 MIR520G-201ENST00000385064 90 ntBASIC2.5□□□□□ -2.01
ATP13A4Q4VNC1 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
ATP13A4Q4VNC1 AL359511.1-201ENST00000402970 211 ntBASIC2.5□□□□□ -2.01
ATP13A4Q4VNC1 RPS4XP11-201ENST00000446897 772 ntBASIC2.5□□□□□ -2.01
ATP13A4Q4VNC1 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.5□□□□□ -2.01
ATP13A4Q4VNC1 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.5□□□□□ -2.01
ATP13A4Q4VNC1 AC026436.1-201ENST00000510537 270 ntBASIC2.5□□□□□ -2.01
ATP13A4Q4VNC1 RNU2-19P-201ENST00000517288 84 ntBASIC2.5□□□□□ -2.01
ATP13A4Q4VNC1 AC127455.1-201ENST00000565496 145 ntBASIC2.5□□□□□ -2.01
ATP13A4Q4VNC1 AC069114.2-201ENST00000604699 304 ntBASIC2.5□□□□□ -2.01
ATP13A4Q4VNC1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
ATP13A4Q4VNC1 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
ATP13A4Q4VNC1 AC018630.2-201ENST00000534866 2403 ntBASIC2.49□□□□□ -2.01
ATP13A4Q4VNC1 AC008555.8-201ENST00000623602 2168 ntBASIC2.49□□□□□ -2.01
ATP13A4Q4VNC1 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
ATP13A4Q4VNC1 MIR411-201ENST00000362239 96 ntBASIC2.49□□□□□ -2.01
ATP13A4Q4VNC1 Y_RNA.293-201ENST00000364908 93 ntBASIC2.49□□□□□ -2.01
ATP13A4Q4VNC1 RNU6-144P-201ENST00000383951 107 ntBASIC2.49□□□□□ -2.01
ATP13A4Q4VNC1 SNORA72-201ENST00000384339 132 ntBASIC2.49□□□□□ -2.01
ATP13A4Q4VNC1 SNORA36B-201ENST00000410438 131 ntBASIC2.49□□□□□ -2.01
ATP13A4Q4VNC1 Y_RNA.700-201ENST00000516806 100 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms