Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 MTCO2P3-201ENST00000442543 421 ntBASIC-1.22□□□□□ -2.6
CCDC58Q4VC31 RNU6-612P-201ENST00000516909 102 ntBASIC-1.22□□□□□ -2.6
CCDC58Q4VC31 AC022784.5-201ENST00000522241 437 ntBASIC-1.22□□□□□ -2.6
CCDC58Q4VC31 AC090617.3-201ENST00000573670 475 ntBASIC-1.22□□□□□ -2.6
CCDC58Q4VC31 AC008507.2-201ENST00000588402 1176 ntBASIC-1.22□□□□□ -2.6
CCDC58Q4VC31 BNIP3P39-201ENST00000601077 554 ntBASIC-1.22□□□□□ -2.6
CCDC58Q4VC31 AL121992.2-201ENST00000606262 256 ntBASIC-1.22□□□□□ -2.6
CCDC58Q4VC31 AC245008.1-201ENST00000608123 476 ntBASIC-1.22□□□□□ -2.6
CCDC58Q4VC31 AC091304.10-201ENST00000641554 121 ntBASIC-1.22□□□□□ -2.6
CCDC58Q4VC31 SNORD95.1-201ENST00000364099 68 ntBASIC-1.23□□□□□ -2.61
CCDC58Q4VC31 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.23□□□□□ -2.61
CCDC58Q4VC31 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-1.23□□□□□ -2.61
CCDC58Q4VC31 EPS15P1-201ENST00000448836 336 ntBASIC-1.23□□□□□ -2.61
CCDC58Q4VC31 AF186996.7-201ENST00000492781 209 ntBASIC-1.23□□□□□ -2.61
CCDC58Q4VC31 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC-1.23□□□□□ -2.61
CCDC58Q4VC31 RNU6-138P-201ENST00000515952 107 ntBASIC-1.23□□□□□ -2.61
CCDC58Q4VC31 RNU7-156P-201ENST00000517214 74 ntBASIC-1.23□□□□□ -2.61
CCDC58Q4VC31 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-1.23□□□□□ -2.61
CCDC58Q4VC31 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-1.23□□□□□ -2.61
CCDC58Q4VC31 AC125232.2-201ENST00000592457 143 ntBASIC-1.23□□□□□ -2.61
CCDC58Q4VC31 MIR6507-201ENST00000613630 70 ntBASIC-1.23□□□□□ -2.61
CCDC58Q4VC31 MTND4P12-201ENST00000498999 1377 ntBASIC-1.23□□□□□ -2.61
CCDC58Q4VC31 RNU6-1287P-201ENST00000362914 107 ntBASIC-1.24□□□□□ -2.61
CCDC58Q4VC31 RNU6-266P-201ENST00000364225 107 ntBASIC-1.24□□□□□ -2.61
CCDC58Q4VC31 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-1.24□□□□□ -2.61
CCDC58Q4VC31 RNU6-1060P-201ENST00000384664 107 ntBASIC-1.24□□□□□ -2.61
CCDC58Q4VC31 SNORD28B-201ENST00000390993 75 ntBASIC-1.24□□□□□ -2.61
CCDC58Q4VC31 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-1.24□□□□□ -2.61
CCDC58Q4VC31 Y_RNA.666-201ENST00000516187 112 ntBASIC-1.24□□□□□ -2.61
CCDC58Q4VC31 RNA5SP169-201ENST00000517268 117 ntBASIC-1.24□□□□□ -2.61
CCDC58Q4VC31 MIR548AR-201ENST00000582191 57 ntBASIC-1.24□□□□□ -2.61
CCDC58Q4VC31 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC-1.24□□□□□ -2.61
CCDC58Q4VC31 RMST_3.1-201ENST00000611651 109 ntBASIC-1.24□□□□□ -2.61
CCDC58Q4VC31 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-1.25□□□□□ -2.61
CCDC58Q4VC31 RNU6-873P-201ENST00000363833 107 ntBASIC-1.25□□□□□ -2.61
CCDC58Q4VC31 Y_RNA.465-201ENST00000384293 102 ntBASIC-1.25□□□□□ -2.61
CCDC58Q4VC31 RNU6-809P-201ENST00000384461 107 ntBASIC-1.25□□□□□ -2.61
CCDC58Q4VC31 SNORD83B-201ENST00000386745 93 ntBASIC-1.25□□□□□ -2.61
CCDC58Q4VC31 MTCO3P40-201ENST00000392516 676 ntBASIC-1.25□□□□□ -2.61
CCDC58Q4VC31 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-1.25□□□□□ -2.61
CCDC58Q4VC31 MTATP6P26-201ENST00000445926 662 ntBASIC-1.25□□□□□ -2.61
CCDC58Q4VC31 MTND4P18-201ENST00000447010 465 ntBASIC-1.25□□□□□ -2.61
CCDC58Q4VC31 RNU7-62P-201ENST00000458856 62 ntBASIC-1.25□□□□□ -2.61
CCDC58Q4VC31 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-1.25□□□□□ -2.61
CCDC58Q4VC31 IGKV1-22-201ENST00000524313 326 ntBASIC-1.25□□□□□ -2.61
CCDC58Q4VC31 AC018448.1-201ENST00000552843 316 ntBASIC-1.25□□□□□ -2.61
CCDC58Q4VC31 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-1.25□□□□□ -2.61
CCDC58Q4VC31 AC009159.2-201ENST00000617603 606 ntBASIC-1.25□□□□□ -2.61
CCDC58Q4VC31 AC068137.4-201ENST00000638485 296 ntBASIC-1.25□□□□□ -2.61
CCDC58Q4VC31 RNU5E-10P-201ENST00000363506 118 ntBASIC-1.26□□□□□ -2.61
CCDC58Q4VC31 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.26□□□□□ -2.61
CCDC58Q4VC31 Y_RNA.472-201ENST00000384322 102 ntBASIC-1.26□□□□□ -2.61
CCDC58Q4VC31 RNU6-125P-201ENST00000384505 107 ntBASIC-1.26□□□□□ -2.61
CCDC58Q4VC31 SNORD115.1-201ENST00000391109 76 ntBASIC-1.26□□□□□ -2.61
CCDC58Q4VC31 ELOCP21-201ENST00000412558 336 ntBASIC-1.26□□□□□ -2.61
CCDC58Q4VC31 MTCO2P11-201ENST00000431069 680 ntBASIC-1.26□□□□□ -2.61
CCDC58Q4VC31 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-1.26□□□□□ -2.61
CCDC58Q4VC31 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-1.26□□□□□ -2.61
CCDC58Q4VC31 RPL39P5-202ENST00000512505 151 ntBASIC-1.26□□□□□ -2.61
CCDC58Q4VC31 RNA5SP54-201ENST00000516951 92 ntBASIC-1.26□□□□□ -2.61
CCDC58Q4VC31 AC069113.1-201ENST00000517763 267 ntBASIC-1.26□□□□□ -2.61
CCDC58Q4VC31 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-1.26□□□□□ -2.61
CCDC58Q4VC31 AL512427.1-201ENST00000618593 349 ntBASIC-1.26□□□□□ -2.61
CCDC58Q4VC31 AL121895.2-201ENST00000619558 447 ntBASIC-1.26□□□□□ -2.61
CCDC58Q4VC31 MTND5P17-201ENST00000418405 1603 ntBASIC-1.26□□□□□ -2.61
CCDC58Q4VC31 Y_RNA.97-201ENST00000363094 102 ntBASIC-1.27□□□□□ -2.61
CCDC58Q4VC31 RNU6-1048P-201ENST00000364054 107 ntBASIC-1.27□□□□□ -2.61
CCDC58Q4VC31 AC018865.2-201ENST00000423631 129 ntBASIC-1.27□□□□□ -2.61
CCDC58Q4VC31 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-1.27□□□□□ -2.61
CCDC58Q4VC31 AL359672.1-201ENST00000442302 409 ntBASIC-1.27□□□□□ -2.61
CCDC58Q4VC31 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC-1.27□□□□□ -2.61
CCDC58Q4VC31 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-1.27□□□□□ -2.61
CCDC58Q4VC31 RNU2-69P-201ENST00000516061 100 ntBASIC-1.27□□□□□ -2.61
CCDC58Q4VC31 AC013244.3-201ENST00000605614 388 ntBASIC-1.27□□□□□ -2.61
CCDC58Q4VC31 AC134878.1-201ENST00000619901 243 ntBASIC-1.27□□□□□ -2.61
CCDC58Q4VC31 U6.114-201ENST00000636407 96 ntBASIC-1.27□□□□□ -2.61
CCDC58Q4VC31 Y_RNA.415-201ENST00000384012 112 ntBASIC-1.28□□□□□ -2.61
CCDC58Q4VC31 SNORA20B-201ENST00000384220 132 ntBASIC-1.28□□□□□ -2.61
CCDC58Q4VC31 RNU6-434P-201ENST00000384376 107 ntBASIC-1.28□□□□□ -2.61
CCDC58Q4VC31 RNU6-393P-201ENST00000384475 107 ntBASIC-1.28□□□□□ -2.61
CCDC58Q4VC31 MIR487A-201ENST00000385009 80 ntBASIC-1.28□□□□□ -2.61
CCDC58Q4VC31 RNU6-1106P-201ENST00000390845 107 ntBASIC-1.28□□□□□ -2.61
CCDC58Q4VC31 SNORA75.1-201ENST00000391130 148 ntBASIC-1.28□□□□□ -2.61
CCDC58Q4VC31 MIR1257-201ENST00000408490 117 ntBASIC-1.28□□□□□ -2.61
CCDC58Q4VC31 MTCO2P8-201ENST00000412213 658 ntBASIC-1.28□□□□□ -2.61
CCDC58Q4VC31 MIR18B-201ENST00000454574 71 ntBASIC-1.28□□□□□ -2.61
CCDC58Q4VC31 MTND2P32-201ENST00000521584 1038 ntBASIC-1.28□□□□□ -2.61
CCDC58Q4VC31 AP003168.1-201ENST00000530091 307 ntBASIC-1.28□□□□□ -2.61
CCDC58Q4VC31 MTND4P33-201ENST00000556706 766 ntBASIC-1.28□□□□□ -2.61
CCDC58Q4VC31 MIR4677-201ENST00000584153 80 ntBASIC-1.28□□□□□ -2.61
CCDC58Q4VC31 AC016597.2-201ENST00000613256 341 ntBASIC-1.28□□□□□ -2.61
CCDC58Q4VC31 uc_338.4-201ENST00000616635 176 ntBASIC-1.28□□□□□ -2.61
CCDC58Q4VC31 MIR101-2-201ENST00000362195 79 ntBASIC-1.29□□□□□ -2.62
CCDC58Q4VC31 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-1.29□□□□□ -2.62
CCDC58Q4VC31 AC112204.1-201ENST00000502591 103 ntBASIC-1.29□□□□□ -2.62
CCDC58Q4VC31 AC116353.2-201ENST00000505332 712 ntBASIC-1.29□□□□□ -2.62
CCDC58Q4VC31 RNA5SP20-201ENST00000515976 84 ntBASIC-1.29□□□□□ -2.62
CCDC58Q4VC31 SCARNA17-201ENST00000516183 144 ntBASIC-1.29□□□□□ -2.62
CCDC58Q4VC31 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-1.29□□□□□ -2.62
CCDC58Q4VC31 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-1.29□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 201.2 ms