Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 RNU6-1041P-201ENST00000516254 102 ntBASIC2.26□□□□□ -2.05
PTCHD3Q3KNS1 RNA5SP281-201ENST00000516504 135 ntBASIC2.26□□□□□ -2.05
PTCHD3Q3KNS1 AC027419.1-201ENST00000522976 328 ntBASIC2.26□□□□□ -2.05
PTCHD3Q3KNS1 AC090425.1-201ENST00000610007 140 ntBASIC2.26□□□□□ -2.05
PTCHD3Q3KNS1 AL442067.1-201ENST00000613261 223 ntBASIC2.26□□□□□ -2.05
PTCHD3Q3KNS1 Y_RNA.76-201ENST00000362931 109 ntBASIC2.25□□□□□ -2.05
PTCHD3Q3KNS1 Y_RNA.117-201ENST00000363294 101 ntBASIC2.25□□□□□ -2.05
PTCHD3Q3KNS1 SNORA72.4-201ENST00000384174 132 ntBASIC2.25□□□□□ -2.05
PTCHD3Q3KNS1 RNU1-52P-201ENST00000384190 164 ntBASIC2.25□□□□□ -2.05
PTCHD3Q3KNS1 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.25□□□□□ -2.05
PTCHD3Q3KNS1 CST2P1-201ENST00000425770 87 ntBASIC2.25□□□□□ -2.05
PTCHD3Q3KNS1 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.25□□□□□ -2.05
PTCHD3Q3KNS1 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.25□□□□□ -2.05
PTCHD3Q3KNS1 AC097462.1-201ENST00000514125 324 ntBASIC2.25□□□□□ -2.05
PTCHD3Q3KNS1 RNU6-1278P-201ENST00000516130 107 ntBASIC2.25□□□□□ -2.05
PTCHD3Q3KNS1 RNU1-41P-201ENST00000516161 162 ntBASIC2.25□□□□□ -2.05
PTCHD3Q3KNS1 RNU7-99P-201ENST00000516271 62 ntBASIC2.25□□□□□ -2.05
PTCHD3Q3KNS1 RNU1-48P-201ENST00000516400 162 ntBASIC2.25□□□□□ -2.05
PTCHD3Q3KNS1 Y_RNA.679-201ENST00000516416 91 ntBASIC2.25□□□□□ -2.05
PTCHD3Q3KNS1 AC005786.1-201ENST00000588553 154 ntBASIC2.25□□□□□ -2.05
PTCHD3Q3KNS1 AC007229.1-201ENST00000590455 412 ntBASIC2.25□□□□□ -2.05
PTCHD3Q3KNS1 AC080100.1-201ENST00000624239 5356 ntBASIC2.24□□□□□ -2.05
PTCHD3Q3KNS1 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PTCHD3Q3KNS1 RNU6-899P-201ENST00000363947 107 ntBASIC2.24□□□□□ -2.05
PTCHD3Q3KNS1 Y_RNA.292-201ENST00000364904 97 ntBASIC2.24□□□□□ -2.05
PTCHD3Q3KNS1 RNY4P28-201ENST00000365281 93 ntBASIC2.24□□□□□ -2.05
PTCHD3Q3KNS1 RNU6-1323P-201ENST00000384025 107 ntBASIC2.24□□□□□ -2.05
PTCHD3Q3KNS1 RNU6-417P-201ENST00000384712 107 ntBASIC2.24□□□□□ -2.05
PTCHD3Q3KNS1 RNU6-763P-201ENST00000390865 106 ntBASIC2.24□□□□□ -2.05
PTCHD3Q3KNS1 RNA5SP465-201ENST00000391195 109 ntBASIC2.24□□□□□ -2.05
PTCHD3Q3KNS1 HMGN2P39-201ENST00000398005 273 ntBASIC2.24□□□□□ -2.05
PTCHD3Q3KNS1 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.24□□□□□ -2.05
PTCHD3Q3KNS1 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.24□□□□□ -2.05
PTCHD3Q3KNS1 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.24□□□□□ -2.05
PTCHD3Q3KNS1 Y_RNA.700-201ENST00000516806 100 ntBASIC2.24□□□□□ -2.05
PTCHD3Q3KNS1 RNU7-172P-201ENST00000517125 64 ntBASIC2.24□□□□□ -2.05
PTCHD3Q3KNS1 AC024995.1-201ENST00000523014 93 ntBASIC2.24□□□□□ -2.05
PTCHD3Q3KNS1 MIR3668-201ENST00000582138 75 ntBASIC2.24□□□□□ -2.05
PTCHD3Q3KNS1 MIR5007-201ENST00000583098 95 ntBASIC2.24□□□□□ -2.05
PTCHD3Q3KNS1 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.24□□□□□ -2.05
PTCHD3Q3KNS1 AL359075.3-201ENST00000613288 217 ntBASIC2.24□□□□□ -2.05
PTCHD3Q3KNS1 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PTCHD3Q3KNS1 AC131280.1-202ENST00000624067 4211 ntBASIC2.24□□□□□ -2.05
PTCHD3Q3KNS1 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
PTCHD3Q3KNS1 AL356292.1-201ENST00000283110 373 ntBASIC2.23□□□□□ -2.05
PTCHD3Q3KNS1 RNU6-211P-201ENST00000384047 107 ntBASIC2.23□□□□□ -2.05
PTCHD3Q3KNS1 MIR518A2-201ENST00000384966 87 ntBASIC2.23□□□□□ -2.05
PTCHD3Q3KNS1 RNU6-651P-201ENST00000411040 105 ntBASIC2.23□□□□□ -2.05
PTCHD3Q3KNS1 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.23□□□□□ -2.05
PTCHD3Q3KNS1 RNA5SP82-201ENST00000516707 92 ntBASIC2.23□□□□□ -2.05
PTCHD3Q3KNS1 RNU7-116P-201ENST00000516940 62 ntBASIC2.23□□□□□ -2.05
PTCHD3Q3KNS1 AP005660.1-201ENST00000522972 293 ntBASIC2.23□□□□□ -2.05
PTCHD3Q3KNS1 MIR3124-201ENST00000582636 67 ntBASIC2.23□□□□□ -2.05
PTCHD3Q3KNS1 AC005972.2-201ENST00000604690 348 ntBASIC2.23□□□□□ -2.05
PTCHD3Q3KNS1 AC011921.3-201ENST00000605540 361 ntBASIC2.23□□□□□ -2.05
PTCHD3Q3KNS1 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.23□□□□□ -2.05
PTCHD3Q3KNS1 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.23□□□□□ -2.05
PTCHD3Q3KNS1 MIR6766-201ENST00000622641 72 ntBASIC2.23□□□□□ -2.05
PTCHD3Q3KNS1 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.23□□□□□ -2.05
PTCHD3Q3KNS1 AC005336.3-201ENST00000623833 2679 ntBASIC2.23□□□□□ -2.05
PTCHD3Q3KNS1 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
PTCHD3Q3KNS1 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.22□□□□□ -2.05
PTCHD3Q3KNS1 SNORD115-3-201ENST00000363100 82 ntBASIC2.22□□□□□ -2.05
PTCHD3Q3KNS1 Y_RNA.172-201ENST00000363765 102 ntBASIC2.22□□□□□ -2.05
PTCHD3Q3KNS1 Y_RNA.200-201ENST00000364018 102 ntBASIC2.22□□□□□ -2.05
PTCHD3Q3KNS1 RNU6-200P-201ENST00000364743 107 ntBASIC2.22□□□□□ -2.05
PTCHD3Q3KNS1 Y_RNA.304-201ENST00000365011 112 ntBASIC2.22□□□□□ -2.05
PTCHD3Q3KNS1 SNORA26.5-201ENST00000391215 123 ntBASIC2.22□□□□□ -2.05
PTCHD3Q3KNS1 AL355497.1-201ENST00000406262 551 ntBASIC2.22□□□□□ -2.05
PTCHD3Q3KNS1 RNA5SP425-201ENST00000410336 112 ntBASIC2.22□□□□□ -2.05
PTCHD3Q3KNS1 EBAG9P1-201ENST00000418955 543 ntBASIC2.22□□□□□ -2.05
PTCHD3Q3KNS1 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.22□□□□□ -2.05
PTCHD3Q3KNS1 AL162725.1-201ENST00000435405 301 ntBASIC2.22□□□□□ -2.05
PTCHD3Q3KNS1 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.22□□□□□ -2.05
PTCHD3Q3KNS1 YWHAEP4-201ENST00000505390 198 ntBASIC2.22□□□□□ -2.05
PTCHD3Q3KNS1 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.22□□□□□ -2.05
PTCHD3Q3KNS1 SNORD14A-201ENST00000606526 91 ntBASIC2.22□□□□□ -2.05
PTCHD3Q3KNS1 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.22□□□□□ -2.05
PTCHD3Q3KNS1 AC004832.4-201ENST00000608952 331 ntBASIC2.22□□□□□ -2.05
PTCHD3Q3KNS1 AL008718.3-201ENST00000610217 321 ntBASIC2.22□□□□□ -2.05
PTCHD3Q3KNS1 AC013791.1-201ENST00000616619 62 ntBASIC2.22□□□□□ -2.05
PTCHD3Q3KNS1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
PTCHD3Q3KNS1 ZNF720P1-201ENST00000562403 1939 ntBASIC2.21□□□□□ -2.06
PTCHD3Q3KNS1 RNU6-144P-201ENST00000383951 107 ntBASIC2.21□□□□□ -2.06
PTCHD3Q3KNS1 MIR144-201ENST00000384886 86 ntBASIC2.21□□□□□ -2.06
PTCHD3Q3KNS1 MIR1283-2-201ENST00000408621 87 ntBASIC2.21□□□□□ -2.06
PTCHD3Q3KNS1 RN7SKP223-201ENST00000410582 62 ntBASIC2.21□□□□□ -2.06
PTCHD3Q3KNS1 RNA5SP270-201ENST00000411361 118 ntBASIC2.21□□□□□ -2.06
PTCHD3Q3KNS1 AL135786.1-201ENST00000415892 214 ntBASIC2.21□□□□□ -2.06
PTCHD3Q3KNS1 BX510359.4-201ENST00000423750 193 ntBASIC2.21□□□□□ -2.06
PTCHD3Q3KNS1 BTF3P11-201ENST00000426582 477 ntBASIC2.21□□□□□ -2.06
PTCHD3Q3KNS1 AC104332.1-201ENST00000440471 797 ntBASIC2.21□□□□□ -2.06
PTCHD3Q3KNS1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.21□□□□□ -2.06
PTCHD3Q3KNS1 AC010409.1-201ENST00000487382 476 ntBASIC2.21□□□□□ -2.06
PTCHD3Q3KNS1 RPS29P21-201ENST00000496272 170 ntBASIC2.21□□□□□ -2.06
PTCHD3Q3KNS1 RNU1-142P-201ENST00000516682 145 ntBASIC2.21□□□□□ -2.06
PTCHD3Q3KNS1 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.21□□□□□ -2.06
PTCHD3Q3KNS1 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.21□□□□□ -2.06
PTCHD3Q3KNS1 MIR5692C2-201ENST00000577959 77 ntBASIC2.21□□□□□ -2.06
PTCHD3Q3KNS1 MIR5688-201ENST00000580619 83 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms