Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 MIR628-201ENST00000385229 95 ntBASIC1.22□□□□□ -2.21
SCN1BQ07699 MIR653-201ENST00000385279 96 ntBASIC1.22□□□□□ -2.21
SCN1BQ07699 SNORD78.2-201ENST00000391076 69 ntBASIC1.22□□□□□ -2.21
SCN1BQ07699 AL451046.2-201ENST00000403074 277 ntBASIC1.22□□□□□ -2.21
SCN1BQ07699 RNA5SP511-201ENST00000410487 115 ntBASIC1.22□□□□□ -2.21
SCN1BQ07699 AC104332.1-201ENST00000440471 797 ntBASIC1.22□□□□□ -2.21
SCN1BQ07699 RNU6-322P-201ENST00000516010 103 ntBASIC1.22□□□□□ -2.21
SCN1BQ07699 SNORA31.2-201ENST00000516019 134 ntBASIC1.22□□□□□ -2.21
SCN1BQ07699 RNU6-1337P-201ENST00000516525 95 ntBASIC1.22□□□□□ -2.21
SCN1BQ07699 SNORA31.24-201ENST00000517232 57 ntBASIC1.22□□□□□ -2.21
SCN1BQ07699 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.22□□□□□ -2.21
SCN1BQ07699 AL117336.2-201ENST00000602435 335 ntBASIC1.22□□□□□ -2.21
SCN1BQ07699 AC006380.1-201ENST00000603598 186 ntBASIC1.22□□□□□ -2.21
SCN1BQ07699 BX284668.6-201ENST00000606899 438 ntBASIC1.22□□□□□ -2.21
SCN1BQ07699 AC011476.5-201ENST00000615594 130 ntBASIC1.22□□□□□ -2.21
SCN1BQ07699 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.22□□□□□ -2.21
SCN1BQ07699 MIRLET7C-201ENST00000362160 84 ntBASIC1.21□□□□□ -2.22
SCN1BQ07699 U8.1-201ENST00000362843 134 ntBASIC1.21□□□□□ -2.22
SCN1BQ07699 Y_RNA.101-201ENST00000363154 102 ntBASIC1.21□□□□□ -2.22
SCN1BQ07699 RNU6-939P-201ENST00000384634 107 ntBASIC1.21□□□□□ -2.22
SCN1BQ07699 MIR150-201ENST00000385048 84 ntBASIC1.21□□□□□ -2.22
SCN1BQ07699 AL354751.2-201ENST00000415471 210 ntBASIC1.21□□□□□ -2.22
SCN1BQ07699 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.21□□□□□ -2.22
SCN1BQ07699 AC108210.2-201ENST00000503681 201 ntBASIC1.21□□□□□ -2.22
SCN1BQ07699 SNORA70.12-201ENST00000516084 153 ntBASIC1.21□□□□□ -2.22
SCN1BQ07699 RNU6-947P-201ENST00000516264 106 ntBASIC1.21□□□□□ -2.22
SCN1BQ07699 RNU1-92P-201ENST00000517017 135 ntBASIC1.21□□□□□ -2.22
SCN1BQ07699 AL645939.4-201ENST00000604495 135 ntBASIC1.21□□□□□ -2.22
SCN1BQ07699 U2.1-201ENST00000618978 145 ntBASIC1.21□□□□□ -2.22
SCN1BQ07699 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.21□□□□□ -2.22
SCN1BQ07699 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.2□□□□□ -2.22
SCN1BQ07699 Y_RNA.142-201ENST00000363491 102 ntBASIC1.2□□□□□ -2.22
SCN1BQ07699 MIR559-201ENST00000385188 96 ntBASIC1.2□□□□□ -2.22
SCN1BQ07699 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
SCN1BQ07699 AL031003.1-201ENST00000404229 172 ntBASIC1.2□□□□□ -2.22
SCN1BQ07699 Y_RNA.621-201ENST00000411065 96 ntBASIC1.2□□□□□ -2.22
SCN1BQ07699 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.2□□□□□ -2.22
SCN1BQ07699 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.2□□□□□ -2.22
SCN1BQ07699 Z98949.2-201ENST00000440996 144 ntBASIC1.2□□□□□ -2.22
SCN1BQ07699 RPEP5-201ENST00000441137 268 ntBASIC1.2□□□□□ -2.22
SCN1BQ07699 AC048334.1-201ENST00000477975 159 ntBASIC1.2□□□□□ -2.22
SCN1BQ07699 RNU6-277P-201ENST00000516272 106 ntBASIC1.2□□□□□ -2.22
SCN1BQ07699 RNU6-1116P-201ENST00000517269 99 ntBASIC1.2□□□□□ -2.22
SCN1BQ07699 AL358944.1-201ENST00000528537 144 ntBASIC1.2□□□□□ -2.22
SCN1BQ07699 MIR4255-201ENST00000579351 72 ntBASIC1.2□□□□□ -2.22
SCN1BQ07699 AC005176.2-201ENST00000596933 147 ntBASIC1.2□□□□□ -2.22
SCN1BQ07699 AC027335.2-201ENST00000624030 375 ntBASIC1.2□□□□□ -2.22
SCN1BQ07699 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
SCN1BQ07699 SNORA2.2-201ENST00000365473 135 ntBASIC1.19□□□□□ -2.22
SCN1BQ07699 RNU6-1080P-201ENST00000383982 107 ntBASIC1.19□□□□□ -2.22
SCN1BQ07699 RNY4P36-201ENST00000391116 96 ntBASIC1.19□□□□□ -2.22
SCN1BQ07699 RNU2-54P-201ENST00000410299 190 ntBASIC1.19□□□□□ -2.22
SCN1BQ07699 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.19□□□□□ -2.22
SCN1BQ07699 AC096644.2-201ENST00000429278 159 ntBASIC1.19□□□□□ -2.22
SCN1BQ07699 RPS4XP11-201ENST00000446897 772 ntBASIC1.19□□□□□ -2.22
SCN1BQ07699 HSPE1P13-201ENST00000451143 297 ntBASIC1.19□□□□□ -2.22
SCN1BQ07699 RNA5SP404-201ENST00000517118 132 ntBASIC1.19□□□□□ -2.22
SCN1BQ07699 SNORA70.22-201ENST00000517160 124 ntBASIC1.19□□□□□ -2.22
SCN1BQ07699 DNAJC19P9-201ENST00000555084 351 ntBASIC1.19□□□□□ -2.22
SCN1BQ07699 AC005730.3-201ENST00000583067 366 ntBASIC1.19□□□□□ -2.22
SCN1BQ07699 AC240442.1-201ENST00000616055 283 ntBASIC1.19□□□□□ -2.22
SCN1BQ07699 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.19□□□□□ -2.22
SCN1BQ07699 MIR1302-1-201ENST00000637932 143 ntBASIC1.19□□□□□ -2.22
SCN1BQ07699 RNU6-1283P-201ENST00000365314 105 ntBASIC1.18□□□□□ -2.22
SCN1BQ07699 Y_RNA.387-201ENST00000383918 102 ntBASIC1.18□□□□□ -2.22
SCN1BQ07699 RNU6-20P-201ENST00000384106 107 ntBASIC1.18□□□□□ -2.22
SCN1BQ07699 SNORD116-29-201ENST00000384516 83 ntBASIC1.18□□□□□ -2.22
SCN1BQ07699 AL162725.1-201ENST00000435405 301 ntBASIC1.18□□□□□ -2.22
SCN1BQ07699 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.18□□□□□ -2.22
SCN1BQ07699 SNORA31.4-201ENST00000516049 129 ntBASIC1.18□□□□□ -2.22
SCN1BQ07699 AC068338.1-201ENST00000565567 176 ntBASIC1.18□□□□□ -2.22
SCN1BQ07699 MIR4659A-201ENST00000580269 81 ntBASIC1.18□□□□□ -2.22
SCN1BQ07699 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.18□□□□□ -2.22
SCN1BQ07699 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
SCN1BQ07699 ZNF72P-201ENST00000425869 1908 ntBASIC1.17□□□□□ -2.22
SCN1BQ07699 RNU6-490P-201ENST00000362985 107 ntBASIC1.17□□□□□ -2.22
SCN1BQ07699 SNORD68-201ENST00000363214 84 ntBASIC1.17□□□□□ -2.22
SCN1BQ07699 RNU6-324P-201ENST00000363957 106 ntBASIC1.17□□□□□ -2.22
SCN1BQ07699 RNU4-13P-201ENST00000364019 141 ntBASIC1.17□□□□□ -2.22
SCN1BQ07699 Y_RNA.384-201ENST00000383909 102 ntBASIC1.17□□□□□ -2.22
SCN1BQ07699 RNU6-708P-201ENST00000384217 107 ntBASIC1.17□□□□□ -2.22
SCN1BQ07699 SNORD116-13-201ENST00000384408 92 ntBASIC1.17□□□□□ -2.22
SCN1BQ07699 RNU6-910P-201ENST00000390844 107 ntBASIC1.17□□□□□ -2.22
SCN1BQ07699 PIGPP3-201ENST00000425307 415 ntBASIC1.17□□□□□ -2.22
SCN1BQ07699 AC099799.1-201ENST00000439809 192 ntBASIC1.17□□□□□ -2.22
SCN1BQ07699 RNU6-155P-201ENST00000516347 100 ntBASIC1.17□□□□□ -2.22
SCN1BQ07699 RNU6-1012P-201ENST00000516606 109 ntBASIC1.17□□□□□ -2.22
SCN1BQ07699 RNU6-699P-201ENST00000517081 110 ntBASIC1.17□□□□□ -2.22
SCN1BQ07699 MIR3124-201ENST00000582636 67 ntBASIC1.17□□□□□ -2.22
SCN1BQ07699 AC120024.3-201ENST00000603167 156 ntBASIC1.17□□□□□ -2.22
SCN1BQ07699 AC025253.1-201ENST00000613623 543 ntBASIC1.17□□□□□ -2.22
SCN1BQ07699 AC138305.3-201ENST00000624988 240 ntBASIC1.17□□□□□ -2.22
SCN1BQ07699 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.17□□□□□ -2.22
SCN1BQ07699 RNU4-79P-201ENST00000362764 141 ntBASIC1.16□□□□□ -2.22
SCN1BQ07699 RNU1-17P-201ENST00000363022 152 ntBASIC1.16□□□□□ -2.22
SCN1BQ07699 RNU6-626P-201ENST00000363354 107 ntBASIC1.16□□□□□ -2.22
SCN1BQ07699 RNU6-1040P-201ENST00000383974 107 ntBASIC1.16□□□□□ -2.22
SCN1BQ07699 RNU6-163P-201ENST00000384396 106 ntBASIC1.16□□□□□ -2.22
SCN1BQ07699 MIR891A-201ENST00000401237 79 ntBASIC1.16□□□□□ -2.22
SCN1BQ07699 AL591806.2-201ENST00000433122 173 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms