Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC080013.3-201ENST00000606839 578 ntBASIC-0.88□□□□□ -2.55
HIST1H1AQ02539 MIR4788-201ENST00000639104 80 ntBASIC-0.88□□□□□ -2.55
HIST1H1AQ02539 RNU6-125P-201ENST00000384505 107 ntBASIC-0.89□□□□□ -2.55
HIST1H1AQ02539 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.89□□□□□ -2.55
HIST1H1AQ02539 RNU4-30P-201ENST00000410245 143 ntBASIC-0.89□□□□□ -2.55
HIST1H1AQ02539 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.89□□□□□ -2.55
HIST1H1AQ02539 AC018865.2-201ENST00000423631 129 ntBASIC-0.89□□□□□ -2.55
HIST1H1AQ02539 MTCO2P11-201ENST00000431069 680 ntBASIC-0.89□□□□□ -2.55
HIST1H1AQ02539 SUMO1P3-201ENST00000439961 304 ntBASIC-0.89□□□□□ -2.55
HIST1H1AQ02539 AC116353.2-201ENST00000505332 712 ntBASIC-0.89□□□□□ -2.55
HIST1H1AQ02539 RNA5SP20-201ENST00000515976 84 ntBASIC-0.89□□□□□ -2.55
HIST1H1AQ02539 MTND4P33-201ENST00000556706 766 ntBASIC-0.89□□□□□ -2.55
HIST1H1AQ02539 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.89□□□□□ -2.55
HIST1H1AQ02539 MIR3684-201ENST00000579779 74 ntBASIC-0.89□□□□□ -2.55
HIST1H1AQ02539 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-0.89□□□□□ -2.55
HIST1H1AQ02539 uc_338.11-201ENST00000619132 160 ntBASIC-0.89□□□□□ -2.55
HIST1H1AQ02539 MTND4P12-201ENST00000498999 1377 ntBASIC-0.9□□□□□ -2.55
HIST1H1AQ02539 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.9□□□□□ -2.55
HIST1H1AQ02539 RNU6-727P-201ENST00000363592 107 ntBASIC-0.9□□□□□ -2.55
HIST1H1AQ02539 Y_RNA.608-201ENST00000410647 95 ntBASIC-0.9□□□□□ -2.55
HIST1H1AQ02539 MTCO1P5-201ENST00000433573 344 ntBASIC-0.9□□□□□ -2.55
HIST1H1AQ02539 AC114755.3-201ENST00000481111 251 ntBASIC-0.9□□□□□ -2.55
HIST1H1AQ02539 SNORA18.4-201ENST00000516440 124 ntBASIC-0.9□□□□□ -2.55
HIST1H1AQ02539 RNU6-504P-201ENST00000516568 104 ntBASIC-0.9□□□□□ -2.55
HIST1H1AQ02539 RNU2-60P-201ENST00000517290 128 ntBASIC-0.9□□□□□ -2.55
HIST1H1AQ02539 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.9□□□□□ -2.55
HIST1H1AQ02539 MTND1P35-201ENST00000526739 508 ntBASIC-0.9□□□□□ -2.55
HIST1H1AQ02539 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.9□□□□□ -2.55
HIST1H1AQ02539 AC006504.8-201ENST00000621046 635 ntBASIC-0.9□□□□□ -2.55
HIST1H1AQ02539 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.91□□□□□ -2.56
HIST1H1AQ02539 RNU6-873P-201ENST00000363833 107 ntBASIC-0.91□□□□□ -2.56
HIST1H1AQ02539 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.91□□□□□ -2.56
HIST1H1AQ02539 RNU6-407P-201ENST00000365280 104 ntBASIC-0.91□□□□□ -2.56
HIST1H1AQ02539 Y_RNA.367-201ENST00000365544 101 ntBASIC-0.91□□□□□ -2.56
HIST1H1AQ02539 MIR570-201ENST00000384917 97 ntBASIC-0.91□□□□□ -2.56
HIST1H1AQ02539 MTND4P32-201ENST00000437189 1237 ntBASIC-0.91□□□□□ -2.56
HIST1H1AQ02539 POLR2KP2-201ENST00000438155 177 ntBASIC-0.91□□□□□ -2.56
HIST1H1AQ02539 U8.21-201ENST00000459536 136 ntBASIC-0.91□□□□□ -2.56
HIST1H1AQ02539 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.91□□□□□ -2.56
HIST1H1AQ02539 SNORA25.14-201ENST00000516481 132 ntBASIC-0.91□□□□□ -2.56
HIST1H1AQ02539 AC104010.1-201ENST00000616889 150 ntBASIC-0.91□□□□□ -2.56
HIST1H1AQ02539 AC106754.1-201ENST00000562632 1513 ntBASIC-0.92□□□□□ -2.56
HIST1H1AQ02539 SNORD49B-201ENST00000365172 72 ntBASIC-0.92□□□□□ -2.56
HIST1H1AQ02539 SNORA20.2-201ENST00000383922 131 ntBASIC-0.92□□□□□ -2.56
HIST1H1AQ02539 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.92□□□□□ -2.56
HIST1H1AQ02539 RNU6-480P-201ENST00000384332 107 ntBASIC-0.92□□□□□ -2.56
HIST1H1AQ02539 RNU6-1127P-201ENST00000384580 107 ntBASIC-0.92□□□□□ -2.56
HIST1H1AQ02539 HMGN2P32-201ENST00000444648 269 ntBASIC-0.92□□□□□ -2.56
HIST1H1AQ02539 RNU7-62P-201ENST00000458856 62 ntBASIC-0.92□□□□□ -2.56
HIST1H1AQ02539 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.92□□□□□ -2.56
HIST1H1AQ02539 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.92□□□□□ -2.56
HIST1H1AQ02539 AC090617.3-201ENST00000573670 475 ntBASIC-0.92□□□□□ -2.56
HIST1H1AQ02539 MIR4752-201ENST00000579672 72 ntBASIC-0.92□□□□□ -2.56
HIST1H1AQ02539 MIR4775-201ENST00000581168 75 ntBASIC-0.92□□□□□ -2.56
HIST1H1AQ02539 AC091304.10-201ENST00000641554 121 ntBASIC-0.92□□□□□ -2.56
HIST1H1AQ02539 SNORD115-24-201ENST00000363528 82 ntBASIC-0.93□□□□□ -2.56
HIST1H1AQ02539 RNU6-931P-201ENST00000363850 107 ntBASIC-0.93□□□□□ -2.56
HIST1H1AQ02539 RNU4-84P-201ENST00000364200 139 ntBASIC-0.93□□□□□ -2.56
HIST1H1AQ02539 SNORA63C-201ENST00000364578 129 ntBASIC-0.93□□□□□ -2.56
HIST1H1AQ02539 RNU6-169P-201ENST00000365336 107 ntBASIC-0.93□□□□□ -2.56
HIST1H1AQ02539 AL022718.1-201ENST00000412004 84 ntBASIC-0.93□□□□□ -2.56
HIST1H1AQ02539 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-0.93□□□□□ -2.56
HIST1H1AQ02539 AC092447.3-201ENST00000426027 686 ntBASIC-0.93□□□□□ -2.56
HIST1H1AQ02539 AL137792.2-201ENST00000443484 235 ntBASIC-0.93□□□□□ -2.56
HIST1H1AQ02539 RPS29P15-201ENST00000458329 171 ntBASIC-0.93□□□□□ -2.56
HIST1H1AQ02539 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.93□□□□□ -2.56
HIST1H1AQ02539 AC018710.1-201ENST00000506509 158 ntBASIC-0.93□□□□□ -2.56
HIST1H1AQ02539 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.93□□□□□ -2.56
HIST1H1AQ02539 SNORD45.4-201ENST00000516629 73 ntBASIC-0.93□□□□□ -2.56
HIST1H1AQ02539 RNU1-29P-201ENST00000606574 126 ntBASIC-0.93□□□□□ -2.56
HIST1H1AQ02539 uc_338.4-201ENST00000616635 176 ntBASIC-0.93□□□□□ -2.56
HIST1H1AQ02539 uc_338.22-201ENST00000622722 187 ntBASIC-0.93□□□□□ -2.56
HIST1H1AQ02539 AL162726.3-218ENST00000636401 95 ntBASIC-0.93□□□□□ -2.56
HIST1H1AQ02539 SNORA27.1-201ENST00000362604 124 ntBASIC-0.94□□□□□ -2.56
HIST1H1AQ02539 RNU6-117P-201ENST00000365415 107 ntBASIC-0.94□□□□□ -2.56
HIST1H1AQ02539 MIR224-201ENST00000384889 81 ntBASIC-0.94□□□□□ -2.56
HIST1H1AQ02539 SNORD73A-201ENST00000386062 65 ntBASIC-0.94□□□□□ -2.56
HIST1H1AQ02539 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.94□□□□□ -2.56
HIST1H1AQ02539 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.94□□□□□ -2.56
HIST1H1AQ02539 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.94□□□□□ -2.56
HIST1H1AQ02539 MIR18B-201ENST00000454574 71 ntBASIC-0.94□□□□□ -2.56
HIST1H1AQ02539 RNU7-185P-201ENST00000459215 60 ntBASIC-0.94□□□□□ -2.56
HIST1H1AQ02539 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-0.94□□□□□ -2.56
HIST1H1AQ02539 RNU6-758P-201ENST00000516292 89 ntBASIC-0.94□□□□□ -2.56
HIST1H1AQ02539 RNU6-410P-201ENST00000517006 107 ntBASIC-0.94□□□□□ -2.56
HIST1H1AQ02539 RNU6-897P-201ENST00000517135 105 ntBASIC-0.94□□□□□ -2.56
HIST1H1AQ02539 AC018448.1-201ENST00000552843 316 ntBASIC-0.94□□□□□ -2.56
HIST1H1AQ02539 MIR4263-201ENST00000584745 83 ntBASIC-0.94□□□□□ -2.56
HIST1H1AQ02539 AC108676.2-201ENST00000605225 163 ntBASIC-0.94□□□□□ -2.56
HIST1H1AQ02539 AL442067.1-201ENST00000613261 223 ntBASIC-0.94□□□□□ -2.56
HIST1H1AQ02539 RNU5E-10P-201ENST00000363506 118 ntBASIC-0.95□□□□□ -2.56
HIST1H1AQ02539 SNORA51.10-201ENST00000384418 136 ntBASIC-0.95□□□□□ -2.56
HIST1H1AQ02539 RNU6-136P-201ENST00000384663 107 ntBASIC-0.95□□□□□ -2.56
HIST1H1AQ02539 MIR501-201ENST00000390204 84 ntBASIC-0.95□□□□□ -2.56
HIST1H1AQ02539 ELOCP21-201ENST00000412558 336 ntBASIC-0.95□□□□□ -2.56
HIST1H1AQ02539 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.95□□□□□ -2.56
HIST1H1AQ02539 AC133104.1-201ENST00000429100 218 ntBASIC-0.95□□□□□ -2.56
HIST1H1AQ02539 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.95□□□□□ -2.56
HIST1H1AQ02539 USP9YP25-201ENST00000457708 443 ntBASIC-0.95□□□□□ -2.56
HIST1H1AQ02539 RPL23AP75-201ENST00000491601 451 ntBASIC-0.95□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms