Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.74□□□□□ -2.29
UBE2NP61088 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.74□□□□□ -2.29
UBE2NP61088 AC063976.4-201ENST00000421971 163 ntBASIC0.74□□□□□ -2.29
UBE2NP61088 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.74□□□□□ -2.29
UBE2NP61088 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.74□□□□□ -2.29
UBE2NP61088 AC013244.2-201ENST00000603396 103 ntBASIC0.74□□□□□ -2.29
UBE2NP61088 AC009229.3-201ENST00000608056 282 ntBASIC0.74□□□□□ -2.29
UBE2NP61088 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.74□□□□□ -2.29
UBE2NP61088 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
UBE2NP61088 RNU6-969P-201ENST00000383900 105 ntBASIC0.73□□□□□ -2.29
UBE2NP61088 RNA5SP482-201ENST00000391269 118 ntBASIC0.73□□□□□ -2.29
UBE2NP61088 MIR1287-201ENST00000408492 90 ntBASIC0.73□□□□□ -2.29
UBE2NP61088 MTCYBP10-201ENST00000424905 650 ntBASIC0.73□□□□□ -2.29
UBE2NP61088 MTND3P10-201ENST00000450967 341 ntBASIC0.73□□□□□ -2.29
UBE2NP61088 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.73□□□□□ -2.29
UBE2NP61088 RNU6-625P-201ENST00000459412 107 ntBASIC0.73□□□□□ -2.29
UBE2NP61088 AC069439.1-201ENST00000494739 167 ntBASIC0.73□□□□□ -2.29
UBE2NP61088 AC011352.1-201ENST00000512300 793 ntBASIC0.73□□□□□ -2.29
UBE2NP61088 SNORA40.9-201ENST00000515895 93 ntBASIC0.73□□□□□ -2.29
UBE2NP61088 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.73□□□□□ -2.29
UBE2NP61088 MIR3684-201ENST00000579779 74 ntBASIC0.73□□□□□ -2.29
UBE2NP61088 MIR3973-201ENST00000579824 107 ntBASIC0.73□□□□□ -2.29
UBE2NP61088 FAM71BP1-201ENST00000604431 523 ntBASIC0.73□□□□□ -2.29
UBE2NP61088 AL096861.1-201ENST00000610899 123 ntBASIC0.73□□□□□ -2.29
UBE2NP61088 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.73□□□□□ -2.29
UBE2NP61088 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.73□□□□□ -2.29
UBE2NP61088 AC127459.3-201ENST00000624328 466 ntBASIC0.73□□□□□ -2.29
UBE2NP61088 MIR3674-201ENST00000636576 68 ntBASIC0.73□□□□□ -2.29
UBE2NP61088 MIR6767-201ENST00000637302 66 ntBASIC0.73□□□□□ -2.29
UBE2NP61088 MIR6866-201ENST00000638146 69 ntBASIC0.73□□□□□ -2.29
UBE2NP61088 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.73□□□□□ -2.29
UBE2NP61088 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.73□□□□□ -2.29
UBE2NP61088 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.72□□□□□ -2.29
UBE2NP61088 Y_RNA.226-201ENST00000364337 114 ntBASIC0.72□□□□□ -2.29
UBE2NP61088 MIR520E-201ENST00000384867 87 ntBASIC0.72□□□□□ -2.29
UBE2NP61088 SNORD12-201ENST00000391002 90 ntBASIC0.72□□□□□ -2.29
UBE2NP61088 MIR873-201ENST00000401120 77 ntBASIC0.72□□□□□ -2.29
UBE2NP61088 RNA5SP247-201ENST00000411181 105 ntBASIC0.72□□□□□ -2.29
UBE2NP61088 MTND3P8-201ENST00000412909 339 ntBASIC0.72□□□□□ -2.29
UBE2NP61088 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.72□□□□□ -2.29
UBE2NP61088 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.72□□□□□ -2.29
UBE2NP61088 AC233266.1-201ENST00000454518 96 ntBASIC0.72□□□□□ -2.29
UBE2NP61088 AL049830.1-201ENST00000468034 425 ntBASIC0.72□□□□□ -2.29
UBE2NP61088 RNU6-322P-201ENST00000516010 103 ntBASIC0.72□□□□□ -2.29
UBE2NP61088 RNU6-1278P-201ENST00000516130 107 ntBASIC0.72□□□□□ -2.29
UBE2NP61088 ACA64.5-201ENST00000516207 127 ntBASIC0.72□□□□□ -2.29
UBE2NP61088 Y_RNA.708-201ENST00000516950 96 ntBASIC0.72□□□□□ -2.29
UBE2NP61088 RNU6-1096P-201ENST00000517089 102 ntBASIC0.72□□□□□ -2.29
UBE2NP61088 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.72□□□□□ -2.29
UBE2NP61088 AC136932.1-201ENST00000574771 208 ntBASIC0.72□□□□□ -2.29
UBE2NP61088 AC242852.1-201ENST00000612151 96 ntBASIC0.72□□□□□ -2.29
UBE2NP61088 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.72□□□□□ -2.29
UBE2NP61088 AC244015.1-201ENST00000622301 99 ntBASIC0.72□□□□□ -2.29
UBE2NP61088 Y_RNA.243-201ENST00000364481 109 ntBASIC0.71□□□□□ -2.3
UBE2NP61088 RNU6-593P-201ENST00000364716 112 ntBASIC0.71□□□□□ -2.3
UBE2NP61088 RNU6-601P-201ENST00000384540 107 ntBASIC0.71□□□□□ -2.3
UBE2NP61088 MIR562-201ENST00000384894 95 ntBASIC0.71□□□□□ -2.3
UBE2NP61088 MIR146A-201ENST00000385201 99 ntBASIC0.71□□□□□ -2.3
UBE2NP61088 RNU6-510P-201ENST00000391239 108 ntBASIC0.71□□□□□ -2.3
UBE2NP61088 MIR1277-201ENST00000408536 78 ntBASIC0.71□□□□□ -2.3
UBE2NP61088 AC092423.1-201ENST00000430165 186 ntBASIC0.71□□□□□ -2.3
UBE2NP61088 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.71□□□□□ -2.3
UBE2NP61088 SCARNA16.2-201ENST00000516520 172 ntBASIC0.71□□□□□ -2.3
UBE2NP61088 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.71□□□□□ -2.3
UBE2NP61088 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.71□□□□□ -2.3
UBE2NP61088 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.71□□□□□ -2.3
UBE2NP61088 AC108706.1-201ENST00000611053 297 ntBASIC0.71□□□□□ -2.3
UBE2NP61088 MIR1244-1-201ENST00000612829 85 ntBASIC0.71□□□□□ -2.3
UBE2NP61088 AC007014.2-201ENST00000615581 479 ntBASIC0.71□□□□□ -2.3
UBE2NP61088 AC002553.4-201ENST00000616896 331 ntBASIC0.71□□□□□ -2.3
UBE2NP61088 MIR1244-3-201ENST00000635744 85 ntBASIC0.71□□□□□ -2.3
UBE2NP61088 MIR1244-2-201ENST00000636449 85 ntBASIC0.71□□□□□ -2.3
UBE2NP61088 MIR1244-4-202ENST00000636813 85 ntBASIC0.71□□□□□ -2.3
UBE2NP61088 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.71□□□□□ -2.3
UBE2NP61088 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
UBE2NP61088 AC008163.1-202ENST00000636004 2889 ntBASIC0.71□□□□□ -2.3
UBE2NP61088 RNU6-1301P-201ENST00000362724 104 ntBASIC0.7□□□□□ -2.3
UBE2NP61088 Y_RNA.88-201ENST00000363029 99 ntBASIC0.7□□□□□ -2.3
UBE2NP61088 RNU4-40P-201ENST00000364351 143 ntBASIC0.7□□□□□ -2.3
UBE2NP61088 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
UBE2NP61088 SNORA75.2-201ENST00000391138 150 ntBASIC0.7□□□□□ -2.3
UBE2NP61088 SNORA75.3-201ENST00000391231 150 ntBASIC0.7□□□□□ -2.3
UBE2NP61088 RNA5SP511-201ENST00000410487 115 ntBASIC0.7□□□□□ -2.3
UBE2NP61088 RNA5SP475-201ENST00000410568 110 ntBASIC0.7□□□□□ -2.3
UBE2NP61088 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.7□□□□□ -2.3
UBE2NP61088 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.7□□□□□ -2.3
UBE2NP61088 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.7□□□□□ -2.3
UBE2NP61088 UBE2V1P7-201ENST00000446395 340 ntBASIC0.7□□□□□ -2.3
UBE2NP61088 RPS29P1-201ENST00000465274 159 ntBASIC0.7□□□□□ -2.3
UBE2NP61088 RNU6-1213P-201ENST00000517075 94 ntBASIC0.7□□□□□ -2.3
UBE2NP61088 AF235103.2-201ENST00000525753 346 ntBASIC0.7□□□□□ -2.3
UBE2NP61088 AC055872.1-201ENST00000570978 278 ntBASIC0.7□□□□□ -2.3
UBE2NP61088 MIR3192-201ENST00000584920 77 ntBASIC0.7□□□□□ -2.3
UBE2NP61088 AL078603.1-201ENST00000603824 313 ntBASIC0.7□□□□□ -2.3
UBE2NP61088 AL357312.1-201ENST00000603879 298 ntBASIC0.7□□□□□ -2.3
UBE2NP61088 PRELID3BP2-201ENST00000605362 201 ntBASIC0.7□□□□□ -2.3
UBE2NP61088 AC004832.4-201ENST00000608952 331 ntBASIC0.7□□□□□ -2.3
UBE2NP61088 AL008636.1-201ENST00000625038 1018 ntBASIC0.7□□□□□ -2.3
UBE2NP61088 AC027514.1-201ENST00000588561 1603 ntBASIC0.7□□□□□ -2.3
UBE2NP61088 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms