Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.46□□□□□ -2.18
RIPK4P57078 RAC1P9-201ENST00000604990 392 ntBASIC1.46□□□□□ -2.18
RIPK4P57078 PRR13P7-201ENST00000605538 430 ntBASIC1.46□□□□□ -2.18
RIPK4P57078 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.46□□□□□ -2.18
RIPK4P57078 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
RIPK4P57078 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.46□□□□□ -2.18
RIPK4P57078 RNU6-112P-201ENST00000363599 104 ntBASIC1.45□□□□□ -2.18
RIPK4P57078 RNU6-280P-201ENST00000364145 104 ntBASIC1.45□□□□□ -2.18
RIPK4P57078 Y_RNA.214-201ENST00000364201 112 ntBASIC1.45□□□□□ -2.18
RIPK4P57078 Y_RNA.222-201ENST00000364264 102 ntBASIC1.45□□□□□ -2.18
RIPK4P57078 RNU6-245P-201ENST00000384020 107 ntBASIC1.45□□□□□ -2.18
RIPK4P57078 RNU6-418P-201ENST00000384035 107 ntBASIC1.45□□□□□ -2.18
RIPK4P57078 Y_RNA.424-201ENST00000384063 103 ntBASIC1.45□□□□□ -2.18
RIPK4P57078 RNU6-793P-201ENST00000384233 104 ntBASIC1.45□□□□□ -2.18
RIPK4P57078 MIR568-201ENST00000385036 95 ntBASIC1.45□□□□□ -2.18
RIPK4P57078 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.45□□□□□ -2.18
RIPK4P57078 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.45□□□□□ -2.18
RIPK4P57078 RPEP5-201ENST00000441137 268 ntBASIC1.45□□□□□ -2.18
RIPK4P57078 PCNPP5-201ENST00000452246 481 ntBASIC1.45□□□□□ -2.18
RIPK4P57078 HMGN2P9-201ENST00000476875 229 ntBASIC1.45□□□□□ -2.18
RIPK4P57078 AC067942.3-201ENST00000512025 362 ntBASIC1.45□□□□□ -2.18
RIPK4P57078 SNORA40.9-201ENST00000515895 93 ntBASIC1.45□□□□□ -2.18
RIPK4P57078 RNU6-408P-201ENST00000515910 100 ntBASIC1.45□□□□□ -2.18
RIPK4P57078 RNU6-344P-201ENST00000516635 111 ntBASIC1.45□□□□□ -2.18
RIPK4P57078 SNORA44.1-201ENST00000517031 108 ntBASIC1.45□□□□□ -2.18
RIPK4P57078 RNU6-897P-201ENST00000517135 105 ntBASIC1.45□□□□□ -2.18
RIPK4P57078 MIR2355-201ENST00000517199 87 ntBASIC1.45□□□□□ -2.18
RIPK4P57078 AC022616.4-201ENST00000522985 181 ntBASIC1.45□□□□□ -2.18
RIPK4P57078 AC026470.2-201ENST00000561492 181 ntBASIC1.45□□□□□ -2.18
RIPK4P57078 AC136932.1-201ENST00000574771 208 ntBASIC1.45□□□□□ -2.18
RIPK4P57078 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.45□□□□□ -2.18
RIPK4P57078 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
RIPK4P57078 Y_RNA.143-201ENST00000363520 106 ntBASIC1.44□□□□□ -2.18
RIPK4P57078 RNU6-454P-201ENST00000364292 107 ntBASIC1.44□□□□□ -2.18
RIPK4P57078 RNU6-1305P-201ENST00000364353 104 ntBASIC1.44□□□□□ -2.18
RIPK4P57078 RNU6-296P-201ENST00000384608 107 ntBASIC1.44□□□□□ -2.18
RIPK4P57078 MIR628-201ENST00000385229 95 ntBASIC1.44□□□□□ -2.18
RIPK4P57078 MIR300-201ENST00000401138 83 ntBASIC1.44□□□□□ -2.18
RIPK4P57078 MIR548F4-201ENST00000408515 105 ntBASIC1.44□□□□□ -2.18
RIPK4P57078 MIR1252-201ENST00000408861 65 ntBASIC1.44□□□□□ -2.18
RIPK4P57078 AC098869.1-201ENST00000481627 292 ntBASIC1.44□□□□□ -2.18
RIPK4P57078 Y_RNA.683-201ENST00000516508 93 ntBASIC1.44□□□□□ -2.18
RIPK4P57078 RNU2-34P-201ENST00000516534 121 ntBASIC1.44□□□□□ -2.18
RIPK4P57078 Y_RNA.720-201ENST00000517166 92 ntBASIC1.44□□□□□ -2.18
RIPK4P57078 AC131281.1-201ENST00000522984 164 ntBASIC1.44□□□□□ -2.18
RIPK4P57078 AC018448.1-201ENST00000552843 316 ntBASIC1.44□□□□□ -2.18
RIPK4P57078 MIR4295-201ENST00000585286 85 ntBASIC1.44□□□□□ -2.18
RIPK4P57078 AC006504.6-201ENST00000590142 199 ntBASIC1.44□□□□□ -2.18
RIPK4P57078 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.44□□□□□ -2.18
RIPK4P57078 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.44□□□□□ -2.18
RIPK4P57078 Y_RNA.64-201ENST00000362845 102 ntBASIC1.43□□□□□ -2.18
RIPK4P57078 Y_RNA.101-201ENST00000363154 102 ntBASIC1.43□□□□□ -2.18
RIPK4P57078 RNU6-626P-201ENST00000363354 107 ntBASIC1.43□□□□□ -2.18
RIPK4P57078 Y_RNA.133-201ENST00000363428 110 ntBASIC1.43□□□□□ -2.18
RIPK4P57078 Y_RNA.422-201ENST00000384054 114 ntBASIC1.43□□□□□ -2.18
RIPK4P57078 Y_RNA.471-201ENST00000384312 102 ntBASIC1.43□□□□□ -2.18
RIPK4P57078 RNU6-939P-201ENST00000384634 107 ntBASIC1.43□□□□□ -2.18
RIPK4P57078 Y_RNA.551-201ENST00000384661 102 ntBASIC1.43□□□□□ -2.18
RIPK4P57078 MIR30A-201ENST00000385092 71 ntBASIC1.43□□□□□ -2.18
RIPK4P57078 RPL21P1-201ENST00000399532 476 ntBASIC1.43□□□□□ -2.18
RIPK4P57078 MIR1283-1-201ENST00000408494 87 ntBASIC1.43□□□□□ -2.18
RIPK4P57078 RNU6-101P-201ENST00000410323 104 ntBASIC1.43□□□□□ -2.18
RIPK4P57078 MTCO3P19-201ENST00000415864 321 ntBASIC1.43□□□□□ -2.18
RIPK4P57078 AL358176.2-201ENST00000425769 204 ntBASIC1.43□□□□□ -2.18
RIPK4P57078 FCF1P4-201ENST00000448326 183 ntBASIC1.43□□□□□ -2.18
RIPK4P57078 SNORA31.17-201ENST00000516953 127 ntBASIC1.43□□□□□ -2.18
RIPK4P57078 RNU6-856P-201ENST00000516959 98 ntBASIC1.43□□□□□ -2.18
RIPK4P57078 SUMO2P18-201ENST00000518873 252 ntBASIC1.43□□□□□ -2.18
RIPK4P57078 AC023442.1-201ENST00000531247 422 ntBASIC1.43□□□□□ -2.18
RIPK4P57078 AC136443.5-201ENST00000603741 370 ntBASIC1.43□□□□□ -2.18
RIPK4P57078 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.43□□□□□ -2.18
RIPK4P57078 MIR8070-201ENST00000616510 88 ntBASIC1.43□□□□□ -2.18
RIPK4P57078 AC010205.1-201ENST00000616668 449 ntBASIC1.43□□□□□ -2.18
RIPK4P57078 AC068205.3-201ENST00000636385 468 ntBASIC1.43□□□□□ -2.18
RIPK4P57078 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
RIPK4P57078 Y_RNA.145-201ENST00000363527 102 ntBASIC1.42□□□□□ -2.18
RIPK4P57078 Y_RNA.210-201ENST00000364161 110 ntBASIC1.42□□□□□ -2.18
RIPK4P57078 RNU6-20P-201ENST00000384106 107 ntBASIC1.42□□□□□ -2.18
RIPK4P57078 RNU6-937P-201ENST00000384325 106 ntBASIC1.42□□□□□ -2.18
RIPK4P57078 RNU6-1026P-201ENST00000384465 108 ntBASIC1.42□□□□□ -2.18
RIPK4P57078 RNU6-1105P-201ENST00000384774 107 ntBASIC1.42□□□□□ -2.18
RIPK4P57078 MIR215-201ENST00000384858 110 ntBASIC1.42□□□□□ -2.18
RIPK4P57078 MIR586-201ENST00000385035 97 ntBASIC1.42□□□□□ -2.18
RIPK4P57078 RNU6-1199P-201ENST00000411249 104 ntBASIC1.42□□□□□ -2.18
RIPK4P57078 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.42□□□□□ -2.18
RIPK4P57078 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.42□□□□□ -2.18
RIPK4P57078 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.42□□□□□ -2.18
RIPK4P57078 AC099677.2-201ENST00000436385 175 ntBASIC1.42□□□□□ -2.18
RIPK4P57078 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.42□□□□□ -2.18
RIPK4P57078 RPS29P30-201ENST00000600975 111 ntBASIC1.42□□□□□ -2.18
RIPK4P57078 SNORD11B-201ENST00000607707 90 ntBASIC1.42□□□□□ -2.18
RIPK4P57078 AL353149.1-201ENST00000610667 244 ntBASIC1.42□□□□□ -2.18
RIPK4P57078 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.42□□□□□ -2.18
RIPK4P57078 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
RIPK4P57078 Y_RNA.459-201ENST00000384251 102 ntBASIC1.41□□□□□ -2.18
RIPK4P57078 RNU6-975P-201ENST00000384296 105 ntBASIC1.41□□□□□ -2.18
RIPK4P57078 SNORD78.2-201ENST00000391076 69 ntBASIC1.41□□□□□ -2.18
RIPK4P57078 MRPL35P1-201ENST00000404272 572 ntBASIC1.41□□□□□ -2.18
RIPK4P57078 AL117342.1-201ENST00000404861 406 ntBASIC1.41□□□□□ -2.18
RIPK4P57078 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms