Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 uc_338.17-201ENST00000619633 179 ntBASIC0.48□□□□□ -2.33
CLDN6P56747 RNU6-833P-201ENST00000363486 107 ntBASIC0.47□□□□□ -2.33
CLDN6P56747 Y_RNA.405-201ENST00000383979 100 ntBASIC0.47□□□□□ -2.33
CLDN6P56747 Y_RNA.451-201ENST00000384200 100 ntBASIC0.47□□□□□ -2.33
CLDN6P56747 Y_RNA.524-201ENST00000384564 100 ntBASIC0.47□□□□□ -2.33
CLDN6P56747 Y_RNA.561-201ENST00000384694 100 ntBASIC0.47□□□□□ -2.33
CLDN6P56747 MTCO3P40-201ENST00000392516 676 ntBASIC0.47□□□□□ -2.33
CLDN6P56747 AC114737.2-201ENST00000421583 173 ntBASIC0.47□□□□□ -2.33
CLDN6P56747 Z98949.2-201ENST00000440996 144 ntBASIC0.47□□□□□ -2.33
CLDN6P56747 AC093019.1-201ENST00000443135 252 ntBASIC0.47□□□□□ -2.33
CLDN6P56747 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.47□□□□□ -2.33
CLDN6P56747 U7.7-201ENST00000459276 60 ntBASIC0.47□□□□□ -2.33
CLDN6P56747 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.47□□□□□ -2.33
CLDN6P56747 CYCTP-201ENST00000504253 315 ntBASIC0.47□□□□□ -2.33
CLDN6P56747 AC046134.1-201ENST00000514454 666 ntBASIC0.47□□□□□ -2.33
CLDN6P56747 RNU6-1114P-201ENST00000516022 107 ntBASIC0.47□□□□□ -2.33
CLDN6P56747 Y_RNA.693-201ENST00000516641 110 ntBASIC0.47□□□□□ -2.33
CLDN6P56747 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.47□□□□□ -2.33
CLDN6P56747 AC093023.1-201ENST00000547375 507 ntBASIC0.47□□□□□ -2.33
CLDN6P56747 AL512360.1-201ENST00000555346 234 ntBASIC0.47□□□□□ -2.33
CLDN6P56747 AC025627.3-201ENST00000582078 182 ntBASIC0.47□□□□□ -2.33
CLDN6P56747 AC131055.1-201ENST00000584626 316 ntBASIC0.47□□□□□ -2.33
CLDN6P56747 AC092954.2-201ENST00000609103 430 ntBASIC0.47□□□□□ -2.33
CLDN6P56747 AC243829.6-201ENST00000612652 106 ntBASIC0.47□□□□□ -2.33
CLDN6P56747 7SK.10-201ENST00000621414 298 ntBASIC0.47□□□□□ -2.33
CLDN6P56747 AC078883.4-201ENST00000623218 367 ntBASIC0.47□□□□□ -2.33
CLDN6P56747 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
CLDN6P56747 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
CLDN6P56747 RNU6-1264P-201ENST00000383891 107 ntBASIC0.46□□□□□ -2.34
CLDN6P56747 RNU6-1042P-201ENST00000384204 107 ntBASIC0.46□□□□□ -2.34
CLDN6P56747 RNU6-163P-201ENST00000384396 106 ntBASIC0.46□□□□□ -2.34
CLDN6P56747 Y_RNA.533-201ENST00000384596 114 ntBASIC0.46□□□□□ -2.34
CLDN6P56747 MIR520G-201ENST00000385064 90 ntBASIC0.46□□□□□ -2.34
CLDN6P56747 DEFB108C-201ENST00000400154 252 ntBASIC0.46□□□□□ -2.34
CLDN6P56747 USMG5P1-201ENST00000425964 177 ntBASIC0.46□□□□□ -2.34
CLDN6P56747 MTND3P23-201ENST00000431980 347 ntBASIC0.46□□□□□ -2.34
CLDN6P56747 AL162725.1-201ENST00000435405 301 ntBASIC0.46□□□□□ -2.34
CLDN6P56747 AL137792.2-201ENST00000443484 235 ntBASIC0.46□□□□□ -2.34
CLDN6P56747 AL157398.1-201ENST00000452981 186 ntBASIC0.46□□□□□ -2.34
CLDN6P56747 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.46□□□□□ -2.34
CLDN6P56747 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.46□□□□□ -2.34
CLDN6P56747 RNU6-256P-201ENST00000516747 97 ntBASIC0.46□□□□□ -2.34
CLDN6P56747 AC109810.1-201ENST00000534066 224 ntBASIC0.46□□□□□ -2.34
CLDN6P56747 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.46□□□□□ -2.34
CLDN6P56747 AC120024.3-201ENST00000603167 156 ntBASIC0.46□□□□□ -2.34
CLDN6P56747 AC093913.1-201ENST00000614178 329 ntBASIC0.46□□□□□ -2.34
CLDN6P56747 SEPT14P17-201ENST00000617978 177 ntBASIC0.46□□□□□ -2.34
CLDN6P56747 AL008636.1-201ENST00000625038 1018 ntBASIC0.46□□□□□ -2.34
CLDN6P56747 MTND5P26-201ENST00000426018 1752 ntBASIC0.46□□□□□ -2.34
CLDN6P56747 SNORA25.3-201ENST00000363205 127 ntBASIC0.45□□□□□ -2.34
CLDN6P56747 RNU6-281P-201ENST00000384212 103 ntBASIC0.45□□□□□ -2.34
CLDN6P56747 Y_RNA.530-201ENST00000384587 101 ntBASIC0.45□□□□□ -2.34
CLDN6P56747 RNU6-306P-201ENST00000384617 107 ntBASIC0.45□□□□□ -2.34
CLDN6P56747 RNU5A-5P-201ENST00000411054 116 ntBASIC0.45□□□□□ -2.34
CLDN6P56747 PIGPP3-201ENST00000425307 415 ntBASIC0.45□□□□□ -2.34
CLDN6P56747 USP9YP16-201ENST00000430287 407 ntBASIC0.45□□□□□ -2.34
CLDN6P56747 UQCRBP2-201ENST00000447827 297 ntBASIC0.45□□□□□ -2.34
CLDN6P56747 USP9YP23-201ENST00000455085 407 ntBASIC0.45□□□□□ -2.34
CLDN6P56747 RNU6-1096P-201ENST00000517089 102 ntBASIC0.45□□□□□ -2.34
CLDN6P56747 AC036111.3-201ENST00000526389 112 ntBASIC0.45□□□□□ -2.34
CLDN6P56747 OSBPL9P5-201ENST00000542581 171 ntBASIC0.45□□□□□ -2.34
CLDN6P56747 MIR4273-201ENST00000582824 84 ntBASIC0.45□□□□□ -2.34
CLDN6P56747 DISC2.1-201ENST00000612827 205 ntBASIC0.45□□□□□ -2.34
CLDN6P56747 AL359880.1-201ENST00000621879 266 ntBASIC0.45□□□□□ -2.34
CLDN6P56747 AC127459.3-201ENST00000624328 466 ntBASIC0.45□□□□□ -2.34
CLDN6P56747 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.45□□□□□ -2.34
CLDN6P56747 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
CLDN6P56747 Y_RNA.77-201ENST00000362962 107 ntBASIC0.44□□□□□ -2.34
CLDN6P56747 RNU6-945P-201ENST00000383947 107 ntBASIC0.44□□□□□ -2.34
CLDN6P56747 Y_RNA.433-201ENST00000384089 102 ntBASIC0.44□□□□□ -2.34
CLDN6P56747 Y_RNA.458-201ENST00000384240 102 ntBASIC0.44□□□□□ -2.34
CLDN6P56747 MIR452-201ENST00000385020 85 ntBASIC0.44□□□□□ -2.34
CLDN6P56747 RNU6-1001P-201ENST00000411265 100 ntBASIC0.44□□□□□ -2.34
CLDN6P56747 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.44□□□□□ -2.34
CLDN6P56747 AC092423.1-201ENST00000430165 186 ntBASIC0.44□□□□□ -2.34
CLDN6P56747 RPL23AP50-201ENST00000434149 455 ntBASIC0.44□□□□□ -2.34
CLDN6P56747 RNU7-66P-201ENST00000459469 62 ntBASIC0.44□□□□□ -2.34
CLDN6P56747 RNA5SP476-201ENST00000516613 103 ntBASIC0.44□□□□□ -2.34
CLDN6P56747 RNU11-2P-201ENST00000516898 142 ntBASIC0.44□□□□□ -2.34
CLDN6P56747 Y_RNA.706-201ENST00000516933 99 ntBASIC0.44□□□□□ -2.34
CLDN6P56747 AL358944.1-201ENST00000528537 144 ntBASIC0.44□□□□□ -2.34
CLDN6P56747 AC023442.1-201ENST00000531247 422 ntBASIC0.44□□□□□ -2.34
CLDN6P56747 AC018659.1-201ENST00000551083 169 ntBASIC0.44□□□□□ -2.34
CLDN6P56747 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.44□□□□□ -2.34
CLDN6P56747 AC027279.3-201ENST00000625055 122 ntBASIC0.44□□□□□ -2.34
CLDN6P56747 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.43□□□□□ -2.34
CLDN6P56747 ZNF299P-201ENST00000406845 1804 ntBASIC0.43□□□□□ -2.34
CLDN6P56747 Y_RNA.135-201ENST00000363439 95 ntBASIC0.43□□□□□ -2.34
CLDN6P56747 Y_RNA.212-201ENST00000364177 102 ntBASIC0.43□□□□□ -2.34
CLDN6P56747 VTRNA1-3-201ENST00000365645 89 ntBASIC0.43□□□□□ -2.34
CLDN6P56747 Y_RNA.412-201ENST00000384001 104 ntBASIC0.43□□□□□ -2.34
CLDN6P56747 RNU6-1119P-201ENST00000384349 108 ntBASIC0.43□□□□□ -2.34
CLDN6P56747 SNORD116-8-201ENST00000384365 95 ntBASIC0.43□□□□□ -2.34
CLDN6P56747 RNU6-1297P-201ENST00000384415 104 ntBASIC0.43□□□□□ -2.34
CLDN6P56747 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.43□□□□□ -2.34
CLDN6P56747 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.43□□□□□ -2.34
CLDN6P56747 PCNPP5-201ENST00000452246 481 ntBASIC0.43□□□□□ -2.34
CLDN6P56747 AC067940.1-201ENST00000458411 300 ntBASIC0.43□□□□□ -2.34
CLDN6P56747 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.43□□□□□ -2.34
CLDN6P56747 RNU6-1281P-201ENST00000516223 105 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 627.9 ms