Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 Y_RNA.47-201ENST00000362697 108 ntBASIC1.56□□□□□ -2.16
PAX9P55771 RNU4-90P-201ENST00000362773 141 ntBASIC1.56□□□□□ -2.16
PAX9P55771 SNORA63D-201ENST00000364359 132 ntBASIC1.56□□□□□ -2.16
PAX9P55771 SNORD116-13-201ENST00000384408 92 ntBASIC1.56□□□□□ -2.16
PAX9P55771 MIR515-2-201ENST00000384883 83 ntBASIC1.56□□□□□ -2.16
PAX9P55771 MIR515-1-201ENST00000384884 83 ntBASIC1.56□□□□□ -2.16
PAX9P55771 AL023284.1-201ENST00000403956 276 ntBASIC1.56□□□□□ -2.16
PAX9P55771 RPL23AP6-201ENST00000446637 472 ntBASIC1.56□□□□□ -2.16
PAX9P55771 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.56□□□□□ -2.16
PAX9P55771 RNU1-142P-201ENST00000516682 145 ntBASIC1.56□□□□□ -2.16
PAX9P55771 RNU6-570P-201ENST00000517051 105 ntBASIC1.56□□□□□ -2.16
PAX9P55771 RNU7-172P-201ENST00000517125 64 ntBASIC1.56□□□□□ -2.16
PAX9P55771 AC024995.1-201ENST00000523014 93 ntBASIC1.56□□□□□ -2.16
PAX9P55771 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.56□□□□□ -2.16
PAX9P55771 AC073413.2-201ENST00000604332 360 ntBASIC1.56□□□□□ -2.16
PAX9P55771 AC022217.4-201ENST00000604389 163 ntBASIC1.56□□□□□ -2.16
PAX9P55771 AL773524.1-201ENST00000614065 229 ntBASIC1.56□□□□□ -2.16
PAX9P55771 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.56□□□□□ -2.16
PAX9P55771 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.56□□□□□ -2.16
PAX9P55771 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
PAX9P55771 RNU4-80P-201ENST00000363200 141 ntBASIC1.55□□□□□ -2.16
PAX9P55771 RNU6-290P-201ENST00000365212 101 ntBASIC1.55□□□□□ -2.16
PAX9P55771 Y_RNA.376-201ENST00000365638 108 ntBASIC1.55□□□□□ -2.16
PAX9P55771 RNU6-472P-201ENST00000384299 107 ntBASIC1.55□□□□□ -2.16
PAX9P55771 MT-TW-201ENST00000387382 68 ntBASIC1.55□□□□□ -2.16
PAX9P55771 RNA5SP323-201ENST00000391094 133 ntBASIC1.55□□□□□ -2.16
PAX9P55771 RNA5SP425-201ENST00000410336 112 ntBASIC1.55□□□□□ -2.16
PAX9P55771 RNU6-1203P-201ENST00000410703 110 ntBASIC1.55□□□□□ -2.16
PAX9P55771 AC009310.1-201ENST00000414414 451 ntBASIC1.55□□□□□ -2.16
PAX9P55771 POLR2KP2-201ENST00000438155 177 ntBASIC1.55□□□□□ -2.16
PAX9P55771 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.55□□□□□ -2.16
PAX9P55771 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.55□□□□□ -2.16
PAX9P55771 AC022254.1-201ENST00000567857 235 ntBASIC1.55□□□□□ -2.16
PAX9P55771 AC010900.2-201ENST00000604508 210 ntBASIC1.55□□□□□ -2.16
PAX9P55771 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.55□□□□□ -2.16
PAX9P55771 AL590808.1-201ENST00000618696 141 ntBASIC1.55□□□□□ -2.16
PAX9P55771 MIR8062-201ENST00000621515 85 ntBASIC1.55□□□□□ -2.16
PAX9P55771 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.55□□□□□ -2.16
PAX9P55771 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.54□□□□□ -2.16
PAX9P55771 Y_RNA.136-201ENST00000363444 102 ntBASIC1.54□□□□□ -2.16
PAX9P55771 Y_RNA.483-201ENST00000384380 101 ntBASIC1.54□□□□□ -2.16
PAX9P55771 RNA5SP109-201ENST00000391010 116 ntBASIC1.54□□□□□ -2.16
PAX9P55771 AC244636.1-201ENST00000421152 228 ntBASIC1.54□□□□□ -2.16
PAX9P55771 MTCYBP9-201ENST00000431021 303 ntBASIC1.54□□□□□ -2.16
PAX9P55771 MTND3P2-201ENST00000438452 342 ntBASIC1.54□□□□□ -2.16
PAX9P55771 HSPE1P13-201ENST00000451143 297 ntBASIC1.54□□□□□ -2.16
PAX9P55771 HMGN1P10-201ENST00000474557 553 ntBASIC1.54□□□□□ -2.16
PAX9P55771 MTCO2P24-201ENST00000515611 426 ntBASIC1.54□□□□□ -2.16
PAX9P55771 SNORA70.12-201ENST00000516084 153 ntBASIC1.54□□□□□ -2.16
PAX9P55771 SNORA31.17-201ENST00000516953 127 ntBASIC1.54□□□□□ -2.16
PAX9P55771 AL161670.1-201ENST00000554348 137 ntBASIC1.54□□□□□ -2.16
PAX9P55771 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.54□□□□□ -2.16
PAX9P55771 AP001282.2-201ENST00000616149 309 ntBASIC1.54□□□□□ -2.16
PAX9P55771 AC064859.1-201ENST00000624741 174 ntBASIC1.54□□□□□ -2.16
PAX9P55771 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.54□□□□□ -2.16
PAX9P55771 MIR219B-201ENST00000637023 88 ntBASIC1.54□□□□□ -2.16
PAX9P55771 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
PAX9P55771 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
PAX9P55771 Y_RNA.149-201ENST00000363558 117 ntBASIC1.53□□□□□ -2.16
PAX9P55771 Y_RNA.176-201ENST00000363815 109 ntBASIC1.53□□□□□ -2.16
PAX9P55771 SNORA4.2-201ENST00000365313 147 ntBASIC1.53□□□□□ -2.16
PAX9P55771 Y_RNA.396-201ENST00000383949 103 ntBASIC1.53□□□□□ -2.16
PAX9P55771 RNU6-136P-201ENST00000384663 107 ntBASIC1.53□□□□□ -2.16
PAX9P55771 Y_RNA.569-201ENST00000384749 103 ntBASIC1.53□□□□□ -2.16
PAX9P55771 RNU6-713P-201ENST00000384761 107 ntBASIC1.53□□□□□ -2.16
PAX9P55771 RNU2-2P-201ENST00000410396 191 ntBASIC1.53□□□□□ -2.16
PAX9P55771 RNA5SP511-201ENST00000410487 115 ntBASIC1.53□□□□□ -2.16
PAX9P55771 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.53□□□□□ -2.16
PAX9P55771 Z98742.3-201ENST00000418637 326 ntBASIC1.53□□□□□ -2.16
PAX9P55771 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.53□□□□□ -2.16
PAX9P55771 ZNF355P-201ENST00000427301 3216 ntBASIC1.53□□□□□ -2.16
PAX9P55771 MTCO1P5-201ENST00000433573 344 ntBASIC1.53□□□□□ -2.16
PAX9P55771 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
PAX9P55771 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
PAX9P55771 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.53□□□□□ -2.16
PAX9P55771 AC015720.1-201ENST00000565251 277 ntBASIC1.53□□□□□ -2.16
PAX9P55771 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.53□□□□□ -2.16
PAX9P55771 AC091178.2-201ENST00000584401 117 ntBASIC1.53□□□□□ -2.16
PAX9P55771 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.53□□□□□ -2.16
PAX9P55771 AC004832.4-201ENST00000608952 331 ntBASIC1.53□□□□□ -2.16
PAX9P55771 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.16
PAX9P55771 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
PAX9P55771 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
PAX9P55771 SNORA16.1-201ENST00000364597 132 ntBASIC1.52□□□□□ -2.17
PAX9P55771 SNORD48-201ENST00000364953 64 ntBASIC1.52□□□□□ -2.17
PAX9P55771 Y_RNA.310-201ENST00000365063 113 ntBASIC1.52□□□□□ -2.17
PAX9P55771 RNU6-376P-201ENST00000384731 106 ntBASIC1.52□□□□□ -2.17
PAX9P55771 MIR520A-201ENST00000384862 85 ntBASIC1.52□□□□□ -2.17
PAX9P55771 RNA5SP212-201ENST00000391223 107 ntBASIC1.52□□□□□ -2.17
PAX9P55771 RNU6-855P-201ENST00000410395 104 ntBASIC1.52□□□□□ -2.17
PAX9P55771 RN7SKP192-201ENST00000411291 327 ntBASIC1.52□□□□□ -2.17
PAX9P55771 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.52□□□□□ -2.17
PAX9P55771 RPS20P10-201ENST00000451209 253 ntBASIC1.52□□□□□ -2.17
PAX9P55771 RNA5SP57-201ENST00000459463 123 ntBASIC1.52□□□□□ -2.17
PAX9P55771 AC091021.1-201ENST00000468051 388 ntBASIC1.52□□□□□ -2.17
PAX9P55771 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.52□□□□□ -2.17
PAX9P55771 RPL23AP94-201ENST00000512518 302 ntBASIC1.52□□□□□ -2.17
PAX9P55771 RNU6-191P-201ENST00000516295 94 ntBASIC1.52□□□□□ -2.17
PAX9P55771 RNU6-1338P-201ENST00000516328 91 ntBASIC1.52□□□□□ -2.17
PAX9P55771 RPL21P9-201ENST00000556149 474 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 199.6 ms