Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC027119.1-201ENST00000440877 241 ntBASIC1.34□□□□□ -2.19
VCPP55072 RPS27P1-201ENST00000450552 247 ntBASIC1.34□□□□□ -2.19
VCPP55072 AC091951.2-201ENST00000500762 203 ntBASIC1.34□□□□□ -2.19
VCPP55072 RNU7-99P-201ENST00000516271 62 ntBASIC1.34□□□□□ -2.19
VCPP55072 RNU7-128P-201ENST00000517247 62 ntBASIC1.34□□□□□ -2.19
VCPP55072 AC027419.1-201ENST00000522976 328 ntBASIC1.34□□□□□ -2.19
VCPP55072 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.34□□□□□ -2.19
VCPP55072 MIR4709-201ENST00000577272 72 ntBASIC1.34□□□□□ -2.19
VCPP55072 MIR4801-201ENST00000582704 82 ntBASIC1.34□□□□□ -2.19
VCPP55072 AL132765.2-201ENST00000610812 351 ntBASIC1.34□□□□□ -2.19
VCPP55072 AC133104.2-201ENST00000615272 193 ntBASIC1.34□□□□□ -2.19
VCPP55072 AC006435.5-201ENST00000624486 112 ntBASIC1.34□□□□□ -2.19
VCPP55072 MTND4LP32-201ENST00000636111 270 ntBASIC1.34□□□□□ -2.19
VCPP55072 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
VCPP55072 AC073544.1-201ENST00000600110 1595 ntBASIC1.34□□□□□ -2.2
VCPP55072 MIR216A-201ENST00000385063 110 ntBASIC1.33□□□□□ -2.2
VCPP55072 Y_RNA.592-201ENST00000410274 109 ntBASIC1.33□□□□□ -2.2
VCPP55072 SNORD12B-201ENST00000410433 91 ntBASIC1.33□□□□□ -2.2
VCPP55072 AL161935.2-201ENST00000414627 60 ntBASIC1.33□□□□□ -2.2
VCPP55072 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.33□□□□□ -2.2
VCPP55072 MTND4P28-201ENST00000426217 387 ntBASIC1.33□□□□□ -2.2
VCPP55072 AL606517.2-201ENST00000442855 241 ntBASIC1.33□□□□□ -2.2
VCPP55072 AC010469.2-201ENST00000496412 480 ntBASIC1.33□□□□□ -2.2
VCPP55072 SNORA40.9-201ENST00000515895 93 ntBASIC1.33□□□□□ -2.2
VCPP55072 RNU7-4P-201ENST00000516961 62 ntBASIC1.33□□□□□ -2.2
VCPP55072 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.33□□□□□ -2.2
VCPP55072 AC023157.2-201ENST00000540596 141 ntBASIC1.33□□□□□ -2.2
VCPP55072 AC019288.1-201ENST00000557918 224 ntBASIC1.33□□□□□ -2.2
VCPP55072 MIR3684-201ENST00000579779 74 ntBASIC1.33□□□□□ -2.2
VCPP55072 MIR3937-201ENST00000580135 106 ntBASIC1.33□□□□□ -2.2
VCPP55072 MIR4438-201ENST00000585271 93 ntBASIC1.33□□□□□ -2.2
VCPP55072 AC022217.4-201ENST00000604389 163 ntBASIC1.33□□□□□ -2.2
VCPP55072 AL078604.3-201ENST00000615580 211 ntBASIC1.33□□□□□ -2.2
VCPP55072 MIR1302-1-201ENST00000637932 143 ntBASIC1.33□□□□□ -2.2
VCPP55072 MIR410-201ENST00000362222 80 ntBASIC1.32□□□□□ -2.2
VCPP55072 Y_RNA.259-201ENST00000364619 101 ntBASIC1.32□□□□□ -2.2
VCPP55072 SNORA20B-201ENST00000384220 132 ntBASIC1.32□□□□□ -2.2
VCPP55072 RNU6-939P-201ENST00000384634 107 ntBASIC1.32□□□□□ -2.2
VCPP55072 RNU6-950P-201ENST00000384651 107 ntBASIC1.32□□□□□ -2.2
VCPP55072 AL355796.1-201ENST00000406706 323 ntBASIC1.32□□□□□ -2.2
VCPP55072 AC015922.2-201ENST00000435593 184 ntBASIC1.32□□□□□ -2.2
VCPP55072 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.32□□□□□ -2.2
VCPP55072 MRPS10P1-201ENST00000448483 130 ntBASIC1.32□□□□□ -2.2
VCPP55072 ELOCP24-201ENST00000456370 334 ntBASIC1.32□□□□□ -2.2
VCPP55072 RNU6-625P-201ENST00000459412 107 ntBASIC1.32□□□□□ -2.2
VCPP55072 RPS27P22-201ENST00000478056 241 ntBASIC1.32□□□□□ -2.2
VCPP55072 AC105758.1-201ENST00000506038 399 ntBASIC1.32□□□□□ -2.2
VCPP55072 RNU6-875P-201ENST00000516488 106 ntBASIC1.32□□□□□ -2.2
VCPP55072 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
VCPP55072 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
VCPP55072 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
VCPP55072 RNA5SP457-201ENST00000363657 124 ntBASIC1.31□□□□□ -2.2
VCPP55072 SNORD116-29-201ENST00000384516 83 ntBASIC1.31□□□□□ -2.2
VCPP55072 MIR194-1-201ENST00000384892 85 ntBASIC1.31□□□□□ -2.2
VCPP55072 RNY4P36-201ENST00000391116 96 ntBASIC1.31□□□□□ -2.2
VCPP55072 RNA5SP475-201ENST00000410568 110 ntBASIC1.31□□□□□ -2.2
VCPP55072 RAB28P5-201ENST00000427490 651 ntBASIC1.31□□□□□ -2.2
VCPP55072 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.31□□□□□ -2.2
VCPP55072 RNU7-34P-201ENST00000459394 64 ntBASIC1.31□□□□□ -2.2
VCPP55072 FGF7P4-201ENST00000509595 295 ntBASIC1.31□□□□□ -2.2
VCPP55072 Y_RNA.718-201ENST00000517110 102 ntBASIC1.31□□□□□ -2.2
VCPP55072 AC144568.1-201ENST00000520139 137 ntBASIC1.31□□□□□ -2.2
VCPP55072 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.31□□□□□ -2.2
VCPP55072 AP002001.1-203ENST00000534002 267 ntBASIC1.31□□□□□ -2.2
VCPP55072 MIR5000-201ENST00000577717 103 ntBASIC1.31□□□□□ -2.2
VCPP55072 AL929325.1-201ENST00000603096 117 ntBASIC1.31□□□□□ -2.2
VCPP55072 AC008133.2-201ENST00000624540 351 ntBASIC1.31□□□□□ -2.2
VCPP55072 MIR3674-201ENST00000636576 68 ntBASIC1.31□□□□□ -2.2
VCPP55072 SNORD33-201ENST00000362761 85 ntBASIC1.3□□□□□ -2.2
VCPP55072 RNU6-490P-201ENST00000362985 107 ntBASIC1.3□□□□□ -2.2
VCPP55072 MRPL35P1-201ENST00000404272 572 ntBASIC1.3□□□□□ -2.2
VCPP55072 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.3□□□□□ -2.2
VCPP55072 MRPS18CP6-201ENST00000423587 223 ntBASIC1.3□□□□□ -2.2
VCPP55072 AC010154.1-201ENST00000425857 269 ntBASIC1.3□□□□□ -2.2
VCPP55072 AC093019.1-201ENST00000443135 252 ntBASIC1.3□□□□□ -2.2
VCPP55072 RNU6-1132P-201ENST00000459214 107 ntBASIC1.3□□□□□ -2.2
VCPP55072 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.3□□□□□ -2.2
VCPP55072 AC093852.1-201ENST00000503587 266 ntBASIC1.3□□□□□ -2.2
VCPP55072 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.3□□□□□ -2.2
VCPP55072 SNORA31.10-201ENST00000516482 106 ntBASIC1.3□□□□□ -2.2
VCPP55072 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.3□□□□□ -2.2
VCPP55072 AC090821.2-201ENST00000523552 176 ntBASIC1.3□□□□□ -2.2
VCPP55072 AL355375.2-201ENST00000574825 175 ntBASIC1.3□□□□□ -2.2
VCPP55072 MIR548S-201ENST00000581352 82 ntBASIC1.3□□□□□ -2.2
VCPP55072 MIR8054-201ENST00000620877 86 ntBASIC1.3□□□□□ -2.2
VCPP55072 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.3□□□□□ -2.2
VCPP55072 RNY3P11-201ENST00000364153 102 ntBASIC1.29□□□□□ -2.2
VCPP55072 MIR559-201ENST00000385188 96 ntBASIC1.29□□□□□ -2.2
VCPP55072 RNU6-1009P-201ENST00000390996 107 ntBASIC1.29□□□□□ -2.2
VCPP55072 MRPL42P3-201ENST00000401492 326 ntBASIC1.29□□□□□ -2.2
VCPP55072 Y_RNA.605-201ENST00000410577 105 ntBASIC1.29□□□□□ -2.2
VCPP55072 MTCO3P19-201ENST00000415864 321 ntBASIC1.29□□□□□ -2.2
VCPP55072 AC245047.3-201ENST00000429428 127 ntBASIC1.29□□□□□ -2.2
VCPP55072 MTND5P20-201ENST00000448677 143 ntBASIC1.29□□□□□ -2.2
VCPP55072 RNU7-169P-201ENST00000459456 61 ntBASIC1.29□□□□□ -2.2
VCPP55072 RNU7-94P-201ENST00000459576 63 ntBASIC1.29□□□□□ -2.2
VCPP55072 RPL30P7-201ENST00000479312 323 ntBASIC1.29□□□□□ -2.2
VCPP55072 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.29□□□□□ -2.2
VCPP55072 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.29□□□□□ -2.2
VCPP55072 RNA5SP395-201ENST00000516567 118 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms