Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.89□□□□□ -2.11
RAD23BP54727 AC005786.1-201ENST00000588553 154 ntBASIC1.89□□□□□ -2.11
RAD23BP54727 SNORD113-5-201ENST00000607261 78 ntBASIC1.89□□□□□ -2.11
RAD23BP54727 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.89□□□□□ -2.11
RAD23BP54727 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.88□□□□□ -2.11
RAD23BP54727 SNORD63-201ENST00000384262 68 ntBASIC1.88□□□□□ -2.11
RAD23BP54727 RNU6-574P-201ENST00000384265 107 ntBASIC1.88□□□□□ -2.11
RAD23BP54727 RNU6-505P-201ENST00000384427 107 ntBASIC1.88□□□□□ -2.11
RAD23BP54727 Y_RNA.574-201ENST00000384766 95 ntBASIC1.88□□□□□ -2.11
RAD23BP54727 MIR504-201ENST00000385065 83 ntBASIC1.88□□□□□ -2.11
RAD23BP54727 AL117342.1-201ENST00000404861 406 ntBASIC1.88□□□□□ -2.11
RAD23BP54727 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.88□□□□□ -2.11
RAD23BP54727 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.88□□□□□ -2.11
RAD23BP54727 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.88□□□□□ -2.11
RAD23BP54727 CYCSP49-201ENST00000420810 319 ntBASIC1.88□□□□□ -2.11
RAD23BP54727 HSPE1P25-201ENST00000455484 251 ntBASIC1.88□□□□□ -2.11
RAD23BP54727 RNU6-436P-201ENST00000516171 114 ntBASIC1.88□□□□□ -2.11
RAD23BP54727 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.88□□□□□ -2.11
RAD23BP54727 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.88□□□□□ -2.11
RAD23BP54727 AL137100.2-201ENST00000555786 315 ntBASIC1.88□□□□□ -2.11
RAD23BP54727 MIR4423-201ENST00000580922 80 ntBASIC1.88□□□□□ -2.11
RAD23BP54727 AC084768.2-201ENST00000622736 221 ntBASIC1.88□□□□□ -2.11
RAD23BP54727 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
RAD23BP54727 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
RAD23BP54727 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
RAD23BP54727 SNORA27.1-201ENST00000362604 124 ntBASIC1.87□□□□□ -2.11
RAD23BP54727 Y_RNA.243-201ENST00000364481 109 ntBASIC1.87□□□□□ -2.11
RAD23BP54727 Y_RNA.541-201ENST00000384640 113 ntBASIC1.87□□□□□ -2.11
RAD23BP54727 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
RAD23BP54727 AL512604.1-201ENST00000404812 257 ntBASIC1.87□□□□□ -2.11
RAD23BP54727 MIR548F4-201ENST00000408515 105 ntBASIC1.87□□□□□ -2.11
RAD23BP54727 AL390729.2-201ENST00000416137 156 ntBASIC1.87□□□□□ -2.11
RAD23BP54727 AL358176.2-201ENST00000425769 204 ntBASIC1.87□□□□□ -2.11
RAD23BP54727 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.87□□□□□ -2.11
RAD23BP54727 AL353689.1-201ENST00000438895 199 ntBASIC1.87□□□□□ -2.11
RAD23BP54727 RNU6-496P-201ENST00000516145 99 ntBASIC1.87□□□□□ -2.11
RAD23BP54727 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.87□□□□□ -2.11
RAD23BP54727 DEFB108E-201ENST00000524692 240 ntBASIC1.87□□□□□ -2.11
RAD23BP54727 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
RAD23BP54727 AC073413.2-201ENST00000604332 360 ntBASIC1.87□□□□□ -2.11
RAD23BP54727 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.87□□□□□ -2.11
RAD23BP54727 MIR8081-201ENST00000611533 95 ntBASIC1.87□□□□□ -2.11
RAD23BP54727 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
RAD23BP54727 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
RAD23BP54727 RNU4-90P-201ENST00000362773 141 ntBASIC1.86□□□□□ -2.11
RAD23BP54727 RNU4-80P-201ENST00000363200 141 ntBASIC1.86□□□□□ -2.11
RAD23BP54727 Y_RNA.149-201ENST00000363558 117 ntBASIC1.86□□□□□ -2.11
RAD23BP54727 Y_RNA.172-201ENST00000363765 102 ntBASIC1.86□□□□□ -2.11
RAD23BP54727 SNORD48-201ENST00000364953 64 ntBASIC1.86□□□□□ -2.11
RAD23BP54727 Y_RNA.376-201ENST00000365638 108 ntBASIC1.86□□□□□ -2.11
RAD23BP54727 Y_RNA.461-201ENST00000384263 103 ntBASIC1.86□□□□□ -2.11
RAD23BP54727 RNU6-376P-201ENST00000384731 106 ntBASIC1.86□□□□□ -2.11
RAD23BP54727 Y_RNA.569-201ENST00000384749 103 ntBASIC1.86□□□□□ -2.11
RAD23BP54727 MIR764-201ENST00000390811 85 ntBASIC1.86□□□□□ -2.11
RAD23BP54727 SNORA26.9-201ENST00000391322 122 ntBASIC1.86□□□□□ -2.11
RAD23BP54727 RNU2-7P-201ENST00000410794 178 ntBASIC1.86□□□□□ -2.11
RAD23BP54727 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.86□□□□□ -2.11
RAD23BP54727 AL163195.1-201ENST00000496941 348 ntBASIC1.86□□□□□ -2.11
RAD23BP54727 RNU6-1143P-201ENST00000516125 104 ntBASIC1.86□□□□□ -2.11
RAD23BP54727 RNU1-142P-201ENST00000516682 145 ntBASIC1.86□□□□□ -2.11
RAD23BP54727 RNU7-172P-201ENST00000517125 64 ntBASIC1.86□□□□□ -2.11
RAD23BP54727 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.86□□□□□ -2.11
RAD23BP54727 AC024614.2-201ENST00000577584 372 ntBASIC1.86□□□□□ -2.11
RAD23BP54727 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.86□□□□□ -2.11
RAD23BP54727 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.86□□□□□ -2.11
RAD23BP54727 AC008555.8-201ENST00000623602 2168 ntBASIC1.86□□□□□ -2.11
RAD23BP54727 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
RAD23BP54727 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.85□□□□□ -2.11
RAD23BP54727 Y_RNA.84-201ENST00000363011 104 ntBASIC1.85□□□□□ -2.11
RAD23BP54727 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.85□□□□□ -2.11
RAD23BP54727 MIR568-201ENST00000385036 95 ntBASIC1.85□□□□□ -2.11
RAD23BP54727 MIR873-201ENST00000401120 77 ntBASIC1.85□□□□□ -2.11
RAD23BP54727 RNU6-855P-201ENST00000410395 104 ntBASIC1.85□□□□□ -2.11
RAD23BP54727 EBAG9P1-201ENST00000418955 543 ntBASIC1.85□□□□□ -2.11
RAD23BP54727 RPL23AP42-201ENST00000471152 471 ntBASIC1.85□□□□□ -2.11
RAD23BP54727 RNU6-1337P-201ENST00000516525 95 ntBASIC1.85□□□□□ -2.11
RAD23BP54727 RNU6-250P-201ENST00000516958 103 ntBASIC1.85□□□□□ -2.11
RAD23BP54727 AC084364.2-201ENST00000546924 395 ntBASIC1.85□□□□□ -2.11
RAD23BP54727 AC069114.2-201ENST00000604699 304 ntBASIC1.85□□□□□ -2.11
RAD23BP54727 AL359075.3-201ENST00000613288 217 ntBASIC1.85□□□□□ -2.11
RAD23BP54727 U6.73-201ENST00000619194 103 ntBASIC1.85□□□□□ -2.11
RAD23BP54727 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
RAD23BP54727 Y_RNA.276-201ENST00000364732 109 ntBASIC1.84□□□□□ -2.11
RAD23BP54727 Y_RNA.396-201ENST00000383949 103 ntBASIC1.84□□□□□ -2.11
RAD23BP54727 Y_RNA.483-201ENST00000384380 101 ntBASIC1.84□□□□□ -2.11
RAD23BP54727 SNORD116-13-201ENST00000384408 92 ntBASIC1.84□□□□□ -2.11
RAD23BP54727 RNA5SP109-201ENST00000391010 116 ntBASIC1.84□□□□□ -2.11
RAD23BP54727 MIR1302-6-201ENST00000408466 90 ntBASIC1.84□□□□□ -2.11
RAD23BP54727 MTND3P2-201ENST00000438452 342 ntBASIC1.84□□□□□ -2.11
RAD23BP54727 TRBVB-201ENST00000477100 408 ntBASIC1.84□□□□□ -2.11
RAD23BP54727 AC025465.3-201ENST00000510570 311 ntBASIC1.84□□□□□ -2.11
RAD23BP54727 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.84□□□□□ -2.11
RAD23BP54727 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.84□□□□□ -2.11
RAD23BP54727 RPL21P9-201ENST00000556149 474 ntBASIC1.84□□□□□ -2.11
RAD23BP54727 AC127459.3-201ENST00000624328 466 ntBASIC1.84□□□□□ -2.11
RAD23BP54727 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.84□□□□□ -2.11
RAD23BP54727 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.84□□□□□ -2.12
RAD23BP54727 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
RAD23BP54727 ICE2P2-201ENST00000483823 2787 ntBASIC1.83□□□□□ -2.12
RAD23BP54727 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms