Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 Y_RNA.568-201ENST00000384742 113 ntBASIC2.95□□□□□ -1.94
PMS1P54277 SNORA48.2-201ENST00000390926 124 ntBASIC2.95□□□□□ -1.94
PMS1P54277 Y_RNA.587-201ENST00000391210 103 ntBASIC2.95□□□□□ -1.94
PMS1P54277 MIR548I2-201ENST00000408348 149 ntBASIC2.95□□□□□ -1.94
PMS1P54277 RNU6-1186P-201ENST00000410429 97 ntBASIC2.95□□□□□ -1.94
PMS1P54277 Y_RNA.622-201ENST00000411091 108 ntBASIC2.95□□□□□ -1.94
PMS1P54277 RN7SKP101-201ENST00000411376 320 ntBASIC2.95□□□□□ -1.94
PMS1P54277 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.95□□□□□ -1.94
PMS1P54277 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.95□□□□□ -1.94
PMS1P54277 RN7SKP132-201ENST00000516001 208 ntBASIC2.95□□□□□ -1.94
PMS1P54277 MIR548X2-201ENST00000579776 100 ntBASIC2.95□□□□□ -1.94
PMS1P54277 LARP7P3-201ENST00000579888 337 ntBASIC2.95□□□□□ -1.94
PMS1P54277 AL929325.1-201ENST00000603096 117 ntBASIC2.95□□□□□ -1.94
PMS1P54277 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.95□□□□□ -1.94
PMS1P54277 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
PMS1P54277 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
PMS1P54277 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
PMS1P54277 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.94□□□□□ -1.94
PMS1P54277 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PMS1P54277 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PMS1P54277 snoU2-30.2-201ENST00000362805 70 ntBASIC2.94□□□□□ -1.94
PMS1P54277 RNU6-199P-201ENST00000362954 107 ntBASIC2.94□□□□□ -1.94
PMS1P54277 Y_RNA.99-201ENST00000363138 105 ntBASIC2.94□□□□□ -1.94
PMS1P54277 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.94□□□□□ -1.94
PMS1P54277 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.94□□□□□ -1.94
PMS1P54277 RNU6-1041P-201ENST00000516254 102 ntBASIC2.94□□□□□ -1.94
PMS1P54277 RNU6-426P-201ENST00000516464 97 ntBASIC2.94□□□□□ -1.94
PMS1P54277 MIR4635-201ENST00000583759 79 ntBASIC2.94□□□□□ -1.94
PMS1P54277 MIR3658-201ENST00000636291 56 ntBASIC2.94□□□□□ -1.94
PMS1P54277 Y_RNA.203-201ENST00000364106 102 ntBASIC2.93□□□□□ -1.94
PMS1P54277 RNU6-81P-201ENST00000365608 104 ntBASIC2.93□□□□□ -1.94
PMS1P54277 Y_RNA.521-201ENST00000384560 114 ntBASIC2.93□□□□□ -1.94
PMS1P54277 SNORD37.2-201ENST00000391075 66 ntBASIC2.93□□□□□ -1.94
PMS1P54277 MIR513C-201ENST00000401352 84 ntBASIC2.93□□□□□ -1.94
PMS1P54277 SNORA79-201ENST00000408376 140 ntBASIC2.93□□□□□ -1.94
PMS1P54277 MIR1278-201ENST00000408753 81 ntBASIC2.93□□□□□ -1.94
PMS1P54277 RNA5SP21-201ENST00000410917 96 ntBASIC2.93□□□□□ -1.94
PMS1P54277 AC087499.2-201ENST00000432861 149 ntBASIC2.93□□□□□ -1.94
PMS1P54277 RPS15AP28-201ENST00000435088 386 ntBASIC2.93□□□□□ -1.94
PMS1P54277 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.93□□□□□ -1.94
PMS1P54277 AC104389.3-201ENST00000445629 235 ntBASIC2.93□□□□□ -1.94
PMS1P54277 AC007536.1-201ENST00000533382 349 ntBASIC2.93□□□□□ -1.94
PMS1P54277 AC011604.1-201ENST00000545978 196 ntBASIC2.93□□□□□ -1.94
PMS1P54277 MIR3200-201ENST00000580767 85 ntBASIC2.93□□□□□ -1.94
PMS1P54277 MIR2681-201ENST00000581814 105 ntBASIC2.93□□□□□ -1.94
PMS1P54277 AC007229.1-201ENST00000590455 412 ntBASIC2.93□□□□□ -1.94
PMS1P54277 AC073413.2-201ENST00000604332 360 ntBASIC2.93□□□□□ -1.94
PMS1P54277 AL033523.1-201ENST00000605153 153 ntBASIC2.93□□□□□ -1.94
PMS1P54277 U4atac.1-201ENST00000618345 95 ntBASIC2.93□□□□□ -1.94
PMS1P54277 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PMS1P54277 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PMS1P54277 SNORD45.3-201ENST00000363836 72 ntBASIC2.92□□□□□ -1.94
PMS1P54277 MIR569-201ENST00000385228 96 ntBASIC2.92□□□□□ -1.94
PMS1P54277 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
PMS1P54277 RNA5SP210-201ENST00000391034 120 ntBASIC2.92□□□□□ -1.94
PMS1P54277 SNORA26.7-201ENST00000391288 122 ntBASIC2.92□□□□□ -1.94
PMS1P54277 RNU4-43P-201ENST00000410628 137 ntBASIC2.92□□□□□ -1.94
PMS1P54277 AC023449.1-201ENST00000454464 154 ntBASIC2.92□□□□□ -1.94
PMS1P54277 SNORA25.12-201ENST00000516202 82 ntBASIC2.92□□□□□ -1.94
PMS1P54277 RNU6-1096P-201ENST00000517089 102 ntBASIC2.92□□□□□ -1.94
PMS1P54277 NDUFA5P6-201ENST00000542110 379 ntBASIC2.92□□□□□ -1.94
PMS1P54277 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.92□□□□□ -1.94
PMS1P54277 AL031274.2-201ENST00000599419 203 ntBASIC2.92□□□□□ -1.94
PMS1P54277 AL049861.1-201ENST00000603130 150 ntBASIC2.92□□□□□ -1.94
PMS1P54277 AC012640.5-201ENST00000623897 319 ntBASIC2.92□□□□□ -1.94
PMS1P54277 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
PMS1P54277 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PMS1P54277 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PMS1P54277 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
PMS1P54277 AC245060.5-201ENST00000610778 3293 ntBASIC2.91□□□□□ -1.94
PMS1P54277 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
PMS1P54277 RNU1-96P-201ENST00000364163 162 ntBASIC2.91□□□□□ -1.94
PMS1P54277 Y_RNA.291-201ENST00000364886 113 ntBASIC2.91□□□□□ -1.94
PMS1P54277 RNU6-1080P-201ENST00000383982 107 ntBASIC2.91□□□□□ -1.94
PMS1P54277 RNU6-160P-201ENST00000384591 107 ntBASIC2.91□□□□□ -1.94
PMS1P54277 RNU6-1072P-201ENST00000384703 107 ntBASIC2.91□□□□□ -1.94
PMS1P54277 RNU6-443P-201ENST00000384780 107 ntBASIC2.91□□□□□ -1.94
PMS1P54277 MIR520G-201ENST00000385064 90 ntBASIC2.91□□□□□ -1.94
PMS1P54277 RNU11-5P-201ENST00000391216 129 ntBASIC2.91□□□□□ -1.94
PMS1P54277 RPL30P13-201ENST00000418873 348 ntBASIC2.91□□□□□ -1.94
PMS1P54277 AL353689.1-201ENST00000438895 199 ntBASIC2.91□□□□□ -1.94
PMS1P54277 RPS27P1-201ENST00000450552 247 ntBASIC2.91□□□□□ -1.94
PMS1P54277 SNORA70.24-201ENST00000517233 118 ntBASIC2.91□□□□□ -1.94
PMS1P54277 RPL23AP91-201ENST00000569211 455 ntBASIC2.91□□□□□ -1.94
PMS1P54277 MIR548AI-201ENST00000579940 88 ntBASIC2.91□□□□□ -1.94
PMS1P54277 SNORA9-201ENST00000384215 133 ntBASIC2.9□□□□□ -1.95
PMS1P54277 Y_RNA.621-201ENST00000411065 96 ntBASIC2.9□□□□□ -1.95
PMS1P54277 EDDM3CP-201ENST00000415977 425 ntBASIC2.9□□□□□ -1.95
PMS1P54277 AC245102.2-201ENST00000448956 180 ntBASIC2.9□□□□□ -1.95
PMS1P54277 SNRPGP8-201ENST00000454064 226 ntBASIC2.9□□□□□ -1.95
PMS1P54277 RN7SL499P-201ENST00000481141 276 ntBASIC2.9□□□□□ -1.95
PMS1P54277 RNA5SP272-201ENST00000516095 111 ntBASIC2.9□□□□□ -1.95
PMS1P54277 RNU7-99P-201ENST00000516271 62 ntBASIC2.9□□□□□ -1.95
PMS1P54277 AL161756.2-201ENST00000604597 246 ntBASIC2.9□□□□□ -1.95
PMS1P54277 AL021707.8-201ENST00000609428 183 ntBASIC2.9□□□□□ -1.95
PMS1P54277 AL359075.3-201ENST00000613288 217 ntBASIC2.9□□□□□ -1.95
PMS1P54277 AL137790.1-201ENST00000634283 177 ntBASIC2.9□□□□□ -1.95
PMS1P54277 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PMS1P54277 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.89□□□□□ -1.95
PMS1P54277 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms