Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.7□□□□□ -2.14
LBX1P52954 MIR4287-201ENST00000579398 78 ntBASIC1.7□□□□□ -2.14
LBX1P52954 MIR3171-201ENST00000584270 74 ntBASIC1.7□□□□□ -2.14
LBX1P52954 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.7□□□□□ -2.14
LBX1P52954 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.7□□□□□ -2.14
LBX1P52954 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
LBX1P52954 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.69□□□□□ -2.14
LBX1P52954 SNORA33-201ENST00000363664 130 ntBASIC1.69□□□□□ -2.14
LBX1P52954 SNORA22B-201ENST00000383876 138 ntBASIC1.69□□□□□ -2.14
LBX1P52954 SNORA70.7-201ENST00000384159 133 ntBASIC1.69□□□□□ -2.14
LBX1P52954 Y_RNA.485-201ENST00000384395 102 ntBASIC1.69□□□□□ -2.14
LBX1P52954 MIR628-201ENST00000385229 95 ntBASIC1.69□□□□□ -2.14
LBX1P52954 Y_RNA.605-201ENST00000410577 105 ntBASIC1.69□□□□□ -2.14
LBX1P52954 RNA5SP100-201ENST00000410903 110 ntBASIC1.69□□□□□ -2.14
LBX1P52954 RNA5SP59-201ENST00000410922 110 ntBASIC1.69□□□□□ -2.14
LBX1P52954 RNU6-130P-201ENST00000411112 103 ntBASIC1.69□□□□□ -2.14
LBX1P52954 MTCO3P19-201ENST00000415864 321 ntBASIC1.69□□□□□ -2.14
LBX1P52954 EBAG9P1-201ENST00000418955 543 ntBASIC1.69□□□□□ -2.14
LBX1P52954 AC008134.1-201ENST00000420943 193 ntBASIC1.69□□□□□ -2.14
LBX1P52954 CST2P1-201ENST00000425770 87 ntBASIC1.69□□□□□ -2.14
LBX1P52954 AL160004.2-201ENST00000432935 350 ntBASIC1.69□□□□□ -2.14
LBX1P52954 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.69□□□□□ -2.14
LBX1P52954 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.69□□□□□ -2.14
LBX1P52954 RNU6-625P-201ENST00000459412 107 ntBASIC1.69□□□□□ -2.14
LBX1P52954 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.69□□□□□ -2.14
LBX1P52954 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.69□□□□□ -2.14
LBX1P52954 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.69□□□□□ -2.14
LBX1P52954 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.69□□□□□ -2.14
LBX1P52954 AC022432.1-201ENST00000595739 310 ntBASIC1.69□□□□□ -2.14
LBX1P52954 AC006157.1-201ENST00000611750 366 ntBASIC1.69□□□□□ -2.14
LBX1P52954 PART1_1.1-201ENST00000611761 217 ntBASIC1.69□□□□□ -2.14
LBX1P52954 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.69□□□□□ -2.14
LBX1P52954 AC240442.1-201ENST00000616055 283 ntBASIC1.69□□□□□ -2.14
LBX1P52954 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.69□□□□□ -2.14
LBX1P52954 AC008133.2-201ENST00000624540 351 ntBASIC1.69□□□□□ -2.14
LBX1P52954 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
LBX1P52954 AC005592.1-201ENST00000566527 1640 ntBASIC1.69□□□□□ -2.14
LBX1P52954 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
LBX1P52954 Y_RNA.216-201ENST00000364205 93 ntBASIC1.68□□□□□ -2.14
LBX1P52954 SNORA63D-201ENST00000364359 132 ntBASIC1.68□□□□□ -2.14
LBX1P52954 RNU6-296P-201ENST00000384608 107 ntBASIC1.68□□□□□ -2.14
LBX1P52954 MTND1P14-201ENST00000427400 950 ntBASIC1.68□□□□□ -2.14
LBX1P52954 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.68□□□□□ -2.14
LBX1P52954 RPEP5-201ENST00000441137 268 ntBASIC1.68□□□□□ -2.14
LBX1P52954 RPS26P45-201ENST00000471748 340 ntBASIC1.68□□□□□ -2.14
LBX1P52954 RNU6-966P-201ENST00000516479 104 ntBASIC1.68□□□□□ -2.14
LBX1P52954 AC084364.2-201ENST00000546924 395 ntBASIC1.68□□□□□ -2.14
LBX1P52954 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.68□□□□□ -2.14
LBX1P52954 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.68□□□□□ -2.14
LBX1P52954 AC010900.2-201ENST00000604508 210 ntBASIC1.68□□□□□ -2.14
LBX1P52954 AL121655.1-201ENST00000605811 308 ntBASIC1.68□□□□□ -2.14
LBX1P52954 AC006435.5-201ENST00000624486 112 ntBASIC1.68□□□□□ -2.14
LBX1P52954 MIR3674-201ENST00000636576 68 ntBASIC1.68□□□□□ -2.14
LBX1P52954 AC091812.1-201ENST00000432235 1948 ntBASIC1.68□□□□□ -2.14
LBX1P52954 Y_RNA.243-201ENST00000364481 109 ntBASIC1.67□□□□□ -2.14
LBX1P52954 AL355796.1-201ENST00000406706 323 ntBASIC1.67□□□□□ -2.14
LBX1P52954 RNU6-1199P-201ENST00000411249 104 ntBASIC1.67□□□□□ -2.14
LBX1P52954 SNORA25.10-201ENST00000515926 124 ntBASIC1.67□□□□□ -2.14
LBX1P52954 RNU6-1041P-201ENST00000516254 102 ntBASIC1.67□□□□□ -2.14
LBX1P52954 RNU6-1153P-201ENST00000516760 105 ntBASIC1.67□□□□□ -2.14
LBX1P52954 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.67□□□□□ -2.14
LBX1P52954 AC040926.1-201ENST00000530195 238 ntBASIC1.67□□□□□ -2.14
LBX1P52954 MIR4299-201ENST00000577899 72 ntBASIC1.67□□□□□ -2.14
LBX1P52954 MIR4659A-201ENST00000580269 81 ntBASIC1.67□□□□□ -2.14
LBX1P52954 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.67□□□□□ -2.14
LBX1P52954 AC104695.3-201ENST00000604052 296 ntBASIC1.67□□□□□ -2.14
LBX1P52954 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.67□□□□□ -2.14
LBX1P52954 AC022140.2-201ENST00000623500 188 ntBASIC1.67□□□□□ -2.14
LBX1P52954 SNORD114-7-201ENST00000362520 77 ntBASIC1.66□□□□□ -2.14
LBX1P52954 RNU6-862P-201ENST00000362804 105 ntBASIC1.66□□□□□ -2.14
LBX1P52954 Y_RNA.115-201ENST00000363272 98 ntBASIC1.66□□□□□ -2.14
LBX1P52954 RNU6-112P-201ENST00000363599 104 ntBASIC1.66□□□□□ -2.14
LBX1P52954 SNORD115-30-201ENST00000364117 82 ntBASIC1.66□□□□□ -2.14
LBX1P52954 RNU1-96P-201ENST00000364163 162 ntBASIC1.66□□□□□ -2.14
LBX1P52954 RNU6-1240P-201ENST00000365155 104 ntBASIC1.66□□□□□ -2.14
LBX1P52954 Y_RNA.570-201ENST00000384750 101 ntBASIC1.66□□□□□ -2.14
LBX1P52954 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.66□□□□□ -2.14
LBX1P52954 AC098934.3-201ENST00000430450 190 ntBASIC1.66□□□□□ -2.14
LBX1P52954 SNORD65B-201ENST00000459126 73 ntBASIC1.66□□□□□ -2.14
LBX1P52954 AC010409.1-201ENST00000487382 476 ntBASIC1.66□□□□□ -2.14
LBX1P52954 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.66□□□□□ -2.14
LBX1P52954 AC023442.1-201ENST00000531247 422 ntBASIC1.66□□□□□ -2.14
LBX1P52954 MIR3684-201ENST00000579779 74 ntBASIC1.66□□□□□ -2.14
LBX1P52954 AC012493.3-201ENST00000604494 112 ntBASIC1.66□□□□□ -2.14
LBX1P52954 AL021879.1-201ENST00000611756 288 ntBASIC1.66□□□□□ -2.14
LBX1P52954 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.66□□□□□ -2.14
LBX1P52954 AC011476.5-201ENST00000615594 130 ntBASIC1.66□□□□□ -2.14
LBX1P52954 AL627230.5-201ENST00000619807 58 ntBASIC1.66□□□□□ -2.14
LBX1P52954 AC006001.4-201ENST00000622243 395 ntBASIC1.66□□□□□ -2.14
LBX1P52954 U6.115-201ENST00000636045 103 ntBASIC1.66□□□□□ -2.14
LBX1P52954 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
LBX1P52954 RNU6-694P-201ENST00000364071 147 ntBASIC1.65□□□□□ -2.15
LBX1P52954 Y_RNA.230-201ENST00000364348 109 ntBASIC1.65□□□□□ -2.15
LBX1P52954 RNU6-1080P-201ENST00000383982 107 ntBASIC1.65□□□□□ -2.15
LBX1P52954 MIR193B-201ENST00000384907 83 ntBASIC1.65□□□□□ -2.15
LBX1P52954 RNU6-823P-201ENST00000391042 103 ntBASIC1.65□□□□□ -2.15
LBX1P52954 MRPL42P3-201ENST00000401492 326 ntBASIC1.65□□□□□ -2.15
LBX1P52954 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.65□□□□□ -2.15
LBX1P52954 AC244636.1-201ENST00000421152 228 ntBASIC1.65□□□□□ -2.15
LBX1P52954 AC005002.2-201ENST00000438228 269 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms